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871
datasets available to search
ShareScore release 0.7.1
Dataset results
871 results for “escherichia coli”
L-rhamnose globally changes the transcriptome of planktonic and biofilm Escherichia coli cells and modulates biofilm growth
GEO Series GSE274311. Escherichia coli. 48 samples. Type: Expression profiling by high throughput sequencing.
The RegR virulence regulon of rabbit specific enteropathogenic Escherichia coli strain E22
GEO Series GSE41093. Escherichia coli E22. 8 samples. Type: Expression profiling by array.
Revealing the genome-scale transcriptional regulatory landscape of OmpR highlights its expanded regulatory roles and unexpected importance of narU under osmotic stress in Escherichia coli K-12 MG1655
GEO Series GSE88981. Escherichia coli str. K-12 substr. MG1655. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Transcriptome microRNA profiling of bovine mammary epithelial cells challenged with Escherichia coli or Staphylococcus aureus bacteria reveals pathogen directed microRNA expression profiles
GEO Series GSE51979. Bos taurus. 13 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Escherichia coli segments its controls on carbon-dependent gene expression into global and specific regulations
GEO Series GSE156143. Escherichia coli. 24 samples. Type: Expression profiling by high throughput sequencing.
The Escherichia coli Fur pan-regulon has few conserved but many unique regulatory targets
GEO Series GSE223483. Escherichia coli. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Revealing Transcriptomic Responses in Escherichia coli During Early Antibiotic Exposure
GEO Series GSE295494. Escherichia coli str. K-12 substr. MG1655. 42 samples. Type: Expression profiling by high throughput sequencing.
Bioplatforms Australia: Antibiotic Resistant Sepsis Pathogens Framework Initiative - Escherichia coli MS14386
GEO Series GSE152969. Escherichia coli. 12 samples. Type: Expression profiling by high throughput sequencing.
Sulfamethoxazole – Trimethoprim represses csgD but 2 maintains virulence genes at 30°C in a clinical 3 Escherichia coli O157:H7 isolate
GEO Series GSE110255. Escherichia coli. 18 samples. Type: Expression profiling by high throughput sequencing.
Shiga toxin remodels the intestinal epithelial transcriptional response to Enterohemorrhagic Escherichia coli
GEO Series GSE156056. Oryctolagus cuniculus. 18 samples. Type: Expression profiling by high throughput sequencing.
Global regulators fine-tune the translation and metabolic machinery in Escherichia coli under proteome-efficient anaerobic fermentation
GEO Series GSE153906. Escherichia coli str. K-12 substr. MG1655. 8 samples. Type: Expression profiling by high throughput sequencing.
Comparative Transcriptome Profiling Reveals a Potential Role of Type VI Secretion System and Fimbriae in Virulence of Non-O157 Shiga Toxin-Producing Escherichia coli
GEO Series GSE112430. Escherichia coli. 60 samples. Type: Expression profiling by high throughput sequencing.
Construction of an artificial diploid Escherichia coli using a CRISPR-based chromosome-doubling technique
GEO Series GSE192799. Escherichia coli str. K-12 substr. MG1655. 6 samples. Type: Expression profiling by high throughput sequencing.
Global timeospatial map of RNA polymerase in Escherichia coli
GEO Series GSE153815. Escherichia coli. 40 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Balanced activation of IspG and IspH to eliminate intermediate accumulation and improve isoprenoids production in Escherichia coli
GEO Series GSE84255. Escherichia coli ATCC 8739. 3 samples. Type: Expression profiling by high throughput sequencing.
Expression profiling to identify independent regulatory signals in Escherichia coli
GEO Series GSE122295. Escherichia coli. 30 samples. Type: Expression profiling by high throughput sequencing.
Alteration of global transcription by saccharin in Escherichia coli K12
GEO Series GSE276752. Escherichia coli str. K-12 substr. MG1655. 6 samples. Type: Expression profiling by high throughput sequencing.
Thermally adapted Escherichia coli keeps transcriptomic response during temperature upshift exposure
GEO Series GSE289056. Escherichia coli; Escherichia coli K-12. 4 samples. Type: Expression profiling by array.
ChIP-exo analysis reveals novel uncharacterized transcription factors involved in the diverse regulatory functions of Escherichia coli
GEO Series GSE159777. Escherichia coli K-12. 82 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Epitranscriptomic control of stress adaptations in Escherichia coli
GEO Series GSE309032. Escherichia coli str. K-12 substr. MG1655. 14 samples. Type: Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.