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409
datasets available to search
ShareScore release 0.9.0
Dataset results
409 results for “genome organization”
Spatial genome organization is associated with nematode programmed DNA elimination
GEO Series GSE314626. Ascaris suum. 7 samples. Type: Other.
Deep conservation of cis-regulatory elements and chromatin organization in echinoderms uncover ancestral regulatory features of animal genomes
GEO Series GSE281904. Patiria miniata; Strongylocentrotus purpuratus. 16 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other.
3D genome organization around nuclear speckles drives mRNA splicing efficiency (dataset)
<p>Figure 1 files: U1, U2, U4, U6 weighted bedgraphs, contact scores, and seqFISH processed data</p> <p>Figure 2 files: Splicing efficiency calculations from chromatin RNA seq and SPRITE</p> <p>Figure 3 files: MS2-MCP replicate data</p> <p>Figure 4 files: mouse (mESC and myocyte) and human (H1 hESC, H1-endoderm, HFF-c6, GM12878 SPRITE bedgraphs)</p> <p> </p>
Selective requirement of 3D genomic organization for the Mdm1-Il22-Ifng locus regulation in initial Th1 cell lineage specification and differentiation
GEO Series GSE215179. Mus musculus. 30 samples. Type: Expression profiling by high throughput sequencing.
Developmental dynamics of sea urchin and sea star cis-regulation and the evolution of echinoderm genome organization - ATAC-seq
GEO Series GSE280529. Strongylocentrotus purpuratus; Patiria miniata. 14 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Vostok: A New Looping Factor for the Organization of the Regulatory Genome in the Drosophila Brain
GEO Series GSE285842. Drosophila melanogaster. 12 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Selective requirement of 3D genomic organization for the Mdm1-Il22-Ifng locus regulation in initial Th1 cell lineage specification and differentiation
GEO Series GSE215177. Mus musculus. 69 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
HP1α depletion and TGFβ activation exert antagonistic effects on 3D genome organization
GEO Series GSE316327. Homo sapiens. 18 samples. Type: Expression profiling by high throughput sequencing; Other.
Kids First: Genomic Analysis of a Cohort with Infantile Hemangiomas Associated with Multi-organ Structural Birth Defects
Namespace hosted on the Kids First DRC FHIR services at fhir.kidsfirstdrc.org
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.