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Data from: Where do wintering cormorants come from? Long-term changes in the geographical origin of a migratory bird on a continental scale
1. Populations of migratory birds often mix to a considerable extent in their wintering areas. Knowledge about the composition of wintering populations is highly relevant in relation to management, not least for species, such as the great cormorant Phalacrocorax carbo sinensis, prone to conflicts with human interests. However, few studies have been able to estimate long-term changes in winter population composition. 2. We use 30 years of ringing and recovery data (1983-2013) from all major breeding populations of cormorants in continental Europe (except the Black Sea region) to estimate partitioning probabilities (i.e. the probabilities of moving to specific wintering areas) using a Bayesian capture-mark-recovery model. Combining these results with information on breeding numbers and reproductive output in a population model, we estimate the size and composition of wintering populations in Europe and North Africa. 3. Partitioning probabilities showed some variation over time, but were similar for first-winter and older birds. Cormorants from the western part of the breeding range tended to winter progressively further west over time. This may be a density-dependent response to the recent growth of more easterly breeding populations. 4. All wintering populations grew rapidly over the study period, and their composition showed pronounced changes. All wintering populations were composed of birds from many different breeding populations, but the proportion of cormorants of more easterly origin increased markedly over time in most wintering areas. 5. Policy implications. Cormorant wintering populations in Europe consist of mixtures of birds of different breeding origin, and these mixtures are highly variable over time. This reduces the chances of successfully limiting conflicts in a specific wintering area through e.g. regulation of breeding numbers in one breeding area. The dynamic nature of cormorant winter populations means that conflicts are best addressed when and where the conflict occurs, or on the scale of the entire continental population. It is unlikely that the latter will be cost-effective and politically realistic.09-Jan-2018
Data from: Exploiting the richest patch has a fitness pay-off for the migratory swift parrot
1. Unlike philopatric migrants, the ecology of nomadic migrants is less well understood. This life-history strategy reflects responses to spatiotemporal variation in resource availability and the need to find resource rich patches to initiate breeding. The fitness consequences of movements between regions of patchily distributed resources can provide insight into ecology of all migrants and their responses to global change. 2. We link broad-scale data on spatiotemporal fluctuation in food availability to data on settlement patterns and fitness outcomes for a nomadic migrant, the endangered swift parrot Lathamus discolor. We test several predictions to determine whether facultative movements are adaptive for individual swift parrots in an environment where resources are patchily distributed over time and space. 3. Variation in the availability of swift parrot food resources across our study period was dramatic. As a consequence, swift parrots moved to breed wherever food was most abundant and did not resettle nesting regions in successive years when food availability declined. By moving, swift parrots exploited a variable food resource and reproduced successfully. 4. Exploiting the richest patches allowed swift parrots to maintain stable fitness outcomes between discrete breeding events at different locations. Unlike sedentary species that often produce few or lower quality offspring when food is scarce, nomadic migration buffered swift parrots against extreme environmental variation. 5. We provide the first detailed evidence that facultative movements and nomadic migration are adaptive for individuals in unpredictable environments. Our data support the widely held assumption that nomadic migration allows animals to escape resource limitation.
Data from: Body condition explains migratory performance of a long-distance migrant
Body condition (i.e. relative mass after correcting for structural size) affects the behaviour of migrating birds, but how body condition affects migratory performance, timing and fitness is still largely unknown. Here, we studied the effects of relative body condition on individual departure decisions, wind selectivity, flight speed and timing of migration for a long-distance migratory shorebird, the red knot Calidris canutus rufa. By using automated VHF telemetry on a continental scale, we studied knots' migratory movements with unprecedented temporal resolution over a 3-year period. Knots with a higher relative body condition left the staging site later than birds in lower condition, yet still arrived earlier to their Arctic breeding grounds compared to knots in lower relative body condition. They accomplished this by selecting more favourable winds at departure, thereby flying faster and making shorter stops en route. Individuals with a higher relative body condition in spring migrated south up to a month later than individuals in lower condition, suggesting that individuals in better condition were more likely to have bred successfully. Moreover, individuals with a lower relative body condition in spring had a lower probability of being detected in autumn, suggestive of increased mortality. The pressure to arrive early to the breeding grounds is considered to be an important constraint of migratory behaviour and this study highlights the important influence of body condition on migratory decisions, performance and potentially fitness of migrant birds.
Data from: Divergent immunity and energetic programs in the gills of migratory and resident Oncorhynchus mykiss
Divergent life history strategies occur in steelhead or rainbow trout Oncorhynchus mykiss, and many populations produce both migrant (anadromous fish that move to the ocean after rearing) and resident (do not migrate and remain in fresh water) individuals. Mechanisms leading to each type are only partially understood; while the general tendency of a population is heritable, individual tendency may be plastic, influenced by local environment. Steelhead hatchery programmes aim to mitigate losses in wild stocks by producing trout that will migrate to the ocean and not compete with wild trout for limited freshwater resources. To increase our understanding of gill function in these migratory or resident phenotypes, here we compare gill transcriptome profiles of hatchery-released fish either at the release site (residents) or five river kilometres downstream while still in full fresh water (migrants). To test whether any of these genes can be used as predictive markers for smoltification, we compared these genes between migrant-like and undifferentiated trout while still in the hatchery in a common environment (prerelease). Results confirmed the gradual process of smoltification, and the importance of energetics, gill remodelling and ion transport capacity for migrants. Additionally, residents overexpressed transcripts involved in antiviral defences, potentially for immune surveillance via dendritic cells in the gills. The best smoltification marker candidate was protein s100a4, expression of which was highly correlated with Na(+) , K(+) ATPase (NKA) activity and smolt-like morphology in pre- and postrelease trout gills.
Data from: Wind-associated detours promote seasonal migratory connectivity in a flapping flying long-distance avian migrant
1. It is essential to gain knowledge about the causes and extent of migratory connectivity between stationary periods of migrants to further the understanding of processes affecting populations, and to allow efficient implementation of conservation efforts throughout the annual cycle. Avian migrants likely use optimal routes with respect to mode of locomotion, orientation and migration strategy, influenced by external factors such as wind and topography. In self-powered flapping flying birds any increases in fuel loads are associated with added flight costs. Energy-minimizing migrants are therefore predicted to trade-off extended detours against reduced travel across ecological barriers with no or limited foraging opportunities. 2. Here we quantify the extent of detours taken by different populations of European nightjars Caprimulgus europaeus, to test our predictions that they used routes beneficial according to energetic principles and evaluate the effect of route shape on seasonal migratory connectivity. 3. We combined data on birds tracked from breeding sites along a longitudinal gradient from England to Sweden. We analysed the migratory connectivity between breeding and main non-breeding sites, and en route stopover sites just south of the Sahara desert. We quantified each track's route extension relative to the direct route between breeding and wintering sites, respectively, and contrasted it to the potential detour derived from the barrier reduction along the track while accounting for potential wind effects. 4. Nightjars extended their tracks from the direct route between breeding and main non-breeding sites as they crossed the Mediterranean Sea – Sahara desert, the major ecological barrier in the Palaearctic-African migration system. These clockwise detours were small for birds from eastern sites but increased from east to west breeding longitude. Routes of the tracked birds were associated with partial reduction of the barrier-crossing resulting in a trade-off between route extension and barrier reduction, as expected in an energy-minimizing migrant. 5. This study demonstrates how the costs of barrier crossings in prevailing winds can disrupt migratory routes towards slightly different goals, and thereby promote migratory connectivity. This is an important link between individual migration strategies in association with an ecological barrier, and both spatially and demographic population patterns. 16-Aug-2019
Data from: Feather corticosterone reveals effect of moulting conditions in the autumn on subsequent reproductive output and survival in an Arctic migratory bird
For birds, unpredictable environments during the energetically stressful times of moulting and breeding are expected to have negative fitness effects. Detecting those effects however, might be difficult if individuals modulate their physiology and/or behaviours in ways to minimize short-term fitness costs. Corticosterone in feathers (CORTf) is thought to provide information on total baseline and stress-induced CORT levels at moulting and is an integrated measure of hypothalamic–pituitary–adrenal activity during the time feathers are grown. We predicted that CORTf levels in northern common eider females would relate to subsequent body condition, reproductive success and survival, in a population of eiders nesting in the eastern Canadian Arctic during a capricious period marked by annual avian cholera outbreaks. We collected CORTf data from feathers grown during previous moult in autumn and data on phenology of subsequent reproduction and survival for 242 eider females over 5 years. Using path analyses, we detected a direct relationship between CORTf and arrival date and body condition the following year. CORTf also had negative indirect relationships with both eider reproductive success and survival of eiders during an avian cholera outbreak. This indirect effect was dramatic with a reduction of approximately 30% in subsequent survival of eiders during an avian cholera outbreak when mean CORTf increased by 1 standard deviation. This study highlights the importance of events or processes occurring during moult on subsequent expression of life-history traits and relation to individual fitness, and shows that information from non-destructive sampling of individuals can track carry-over effects across seasons.
Data from: Sex-specific arrival times on the breeding grounds: hybridizing migratory skuas provide empirical support for the role of sex ratios
In migratory animals, protandry (earlier arrival of males on the breeding grounds) prevails over protogyny (females preceding males). In theory, sex differences in timing of arrival should be driven by the operational sex ratio, shifting toward protogyny in female-biased populations. However, empirical support for this hypothesis is, to date, lacking. To test this hypothesis, we analyzed arrival data from three populations of the long-distance migratory south polar skua (Catharacta maccormicki). These populations differed in their operational sex ratio caused by the unidirectional hybridization of male south polar skuas with female brown skuas (Catharacta antarctica lonnbergi). We found that arrival times were protandrous in allopatry, shifting toward protogyny in female-biased populations when breeding in sympatry. This unique observation is consistent with theoretical predictions that sex-specific arrival times should be influenced by sex ratio and that protogyny should be observed in populations with female-biased operational sex ratio.
Data from: Projected changes in prevailing winds for transatlantic migratory birds under global warming
A number of terrestrial bird species that breed in North America cross the Atlantic Ocean during autumn migration when travelling to their non-breeding grounds in the Caribbean or South America. When conducting oceanic crossings, migratory birds tend to associate with mild or supportive winds, whose speed and direction may change under global warming. The implications of these changes for transoceanic migratory bird populations have not been addressed. We used occurrence information from eBird (1950–2015) to estimate the geographical location of population centres at a daily temporal resolution across the annual cycle for 10 transatlantic migratory bird species. We used this information to estimate the location and timing of autumn migration within the transatlantic flyway. We estimated how prevailing winds are projected to change within the transatlantic flyway during this time using daily wind speed anomalies (1996–2005 and 2091–2100) from 29 Atmosphere-Ocean General Circulation Models implemented under CMIP5. Autumn transatlantic migrants have the potential to encounter strong westerly crosswinds early in their transatlantic journey at intermediate and especially high migration altitudes, strong headwinds at low and intermediate migration altitudes within the Caribbean that increase in strength as the season progresses, and weak tailwinds at intermediate and high migration altitudes east of the Caribbean. The CMIP5 simulations suggest that, during this century, the likelihood of autumn transatlantic migrants encountering strong westerly crosswinds will diminish. As global warming progresses, the need for species to compensate or drift under the influence of strong westerly crosswinds during the initial phase of their autumn transatlantic journey may be diminished. Existing strategies that promote headwind avoidance and tailwind assistance will likely remain valid. Thus, climate change may reduce time and energy requirements and the chance of mortality or vagrancy during a specific but likely critical portion of these species' autumn migration journey.
Data from: Multiple habitat use by declining migratory birds necessitates joined-up conservation
Many species depend on multiple habitats at different points in space and time. Their effective conservation requires an understanding of how and when each habitat is used, coupled with adequate protection. Migratory shorebirds use intertidal and supratidal wetlands, both of which are affected by coastal landscape change. Yet the extent to which shorebirds use artificial supratidal habitats, particularly at highly developed stopover sites, remains poorly understood leading to potential deficiencies in habitat management. We surveyed shorebirds on their southward migration in southern Jiangsu, a critical stopover region in the East Asian-Australasian Flyway (EAAF), to measure their use of artificial supratidal habitats and assess linkages between intertidal and supratidal habitat use. To inform management, we examined how biophysical features influenced occupancy of supratidal habitats, and whether these habitats were used for roosting or foraging. We found that shorebirds at four of five sites were limited to artificial supratidal habitats at high tide for ~11–25 days per month because natural intertidal flats were completely covered by seawater. Within the supratidal landscape, at least 37 shorebirds species aggregated on artificial wetlands, and shorebirds were more abundant on larger ponds with less water cover, less vegetation, at least one unvegetated bund, and fewer built structures nearby. Artificial supratidal habitats were rarely used for foraging and rarely occupied when intertidal flats were available, underscoring the complementarity between supratidal roosting habitat and intertidal foraging habitat. Joined-up artificial supratidal management and natural intertidal habitat conservation is clearly required at our study site given the simultaneous dependence by over 35,000 migrating shorebirds on both habitats. Guided by observed patterns of habitat use, there is a clear opportunity to improve habitat condition by working with local land custodians to consider shorebird habitat requirements when managing supratidal ponds. This approach is likely applicable to shorebird sites throughout the EAAF.
Data from: Evolutionary design of a flexible, seasonally migratory, avian phenotype: why trade gizzard mass against pectoral muscle mass?
Migratory birds undergo impressive body remodelling over the course of an annual cycle. Prior to long-distance flights, red knots (Calidris canutus islandica) reduce gizzard mass while increasing body mass and pectoral muscle mass. Although body mass and pectoral muscle mass are functionally linked via their joint effects on flight performance, gizzard and pectoral muscle mass are thought to be independently regulated. Current hypotheses for observed negative within-individual covariation between gizzard and pectoral muscle mass in free-living knots are based on a common factor (e.g., migration) simultaneously affecting both traits, and/or protein limitation forcing allocation decisions. We used diet manipulations to generate within-individual variation in gizzard mass and test for independence between gizzard and pectoral muscle mass within-individuals outside the period of migration and under conditions of high protein availability. Contrary to our prediction, we observed a negative within-individual covariation between gizzard and pectoral muscle mass. We discuss this result as a potential outcome of an evolved mechanism underlying body remodelling associated with migration. Although our proposed mechanism requires empirical testing, this study echoes earlier calls for greater integration of studies of function and mechanism, and in particular, the need for more explicit consideration of the evolution of mechanisms underlying phenotypic design.
Data from: Length polymorphisms at two candidate genes explain variation of migratory behaviors in blackpoll warblers (Setophaga striata)
Migratory behaviors such as the timing and duration of migration are genetically inherited and can be under strong natural selection, yet we still know very little about the specific genes or molecular pathways that control these behaviors. Studies in candidate genes Clock and Adcyap1 have revealed that both of these loci can be significantly correlated with migratory behaviors in birds, though observed relationships appear to vary across species. We investigated geographic genetic structure of Clock and Adcyap1 in four populations of blackpoll warblers (Setophaga striata), a Neotropical-Nearctic migrant that exhibits geographic variation in migratory timing and duration across its boreal breeding distribution. Further, we used data on migratory timing and duration, obtained from light-level geolocator trackers to investigate candidate genotype-phenotype relationships at the individual level. While we found no geographic structure in either candidate gene, we did find evidence that candidate gene lengths are correlated with five of the six migratory traits. Maximum Clock allele length was significantly and negatively associated with spring arrival date. Minimum Adcyap1 allele length was significantly and negatively associated with spring departure date and positively associated with fall arrival date at the wintering grounds. Additionally, we found a significant interaction between Clock and Adcyap1 allele lengths on both spring and fall migratory duration. Adcyap1 heterozygotes also had significantly shorter migration duration in both spring and fall compared to homozygotes. Our results support the growing body of evidence that Clock and Adcyap1 allele lengths are correlated with migratory behaviors in birds.
Elevational niche-shift migration: Why the degree of elevational change matters for the ecology, evolution, and physiology of migratory birds to ornithology
<p>Elevational migration can be defined as roundtrip seasonal movement that involves upward and downward shifts in elevation. These shifts incur physiological challenges that are proportional to the degree of elevational change. Larger shifts in elevation correspond to larger shifts in partial pressure of oxygen, air density, temperature, and UV exposure. Although most avian examples of elevational migration involve subtle shifts that would have minimal impacts on physiology, shifts of <i>any magnitude</i> have previously been considered under the broad umbrella of 'elevational migration'. Here, we consider extreme seasonal elevational movements (≥2000 m), sufficient to shift the elevational dimension of the eco-climatic niche. Migratory bird populations typically maintain inter-seasonal stability in the temperature, precipitation, and elevational aspects of their climatic niches, a tendency that likely reflects genetic physiological specialization on environmental conditions such as atmospheric pressure. A shift of ≥2000 m involves a ≥20% change in air density and oxygen partial pressure, sufficient to incur functionally impactful declines in arterial blood-oxygen saturation and require compensatory shifts in respiratory physiology. We refer to this phenomenon as elevational niche-shift migration (ENSM). In this review, we analyzed >4 million occurrence records to identify 105 populations, representing 92 bird species, that undergo complete or partial ENSM. We identified key ecological and evolutionary questions regarding causes and consequences of ENSM. Our synthesis reveals that ENSM has evolved independently in at least 29 avian families spanning 10 orders. Nonetheless, ENSM is rare relative to other forms of seasonal migration, consistent with the general tendency of seasonal niche conservatism by migratory species and evolutionarily conserved elevational range limits. For many migratory species and populations, within-species patterns of migratory connectivity are not sufficiently understood to determine ENSM status. ENSM is distinguished by its scale within the broader phenomenon of elevational migration. Critical examination of ENSM illustrates fundamental constraints on the ecology and evolution of migration systems, topographical influences on geographic patterns of migratory connectivity, and the remarkable metabolic flexibility of certain bird species that allows them to occupy disparate elevations across different seasons.</p>
Data from: Migratory constraints on yolk precursors limit yolk androgen deposition and underlie a brood reduction strategy in rockhopper penguins
Hormonally mediated maternal effects link maternal phenotype and environmental conditions to offspring phenotype. The production of lipid-rich maternal yolk precursors may provide a mechanism by which lipophilic steroid hormones can be transported to developing yolks, thus predicting a positive correlation between yolk precursors in mothers and androgen levels in eggs. Using rockhopper penguins (Eudyptes chrysocome), which produce a two-egg clutch characterized by extreme egg-size dimorphism, reversed hatching asynchrony and brood-reduction, we examined correlations between circulating concentrations of the primary yolk-precursor vitellogenin (VTG) and levels of yolk androgens. Previous work in Eudyptes penguins has shown that egg-size dimorphism is the product of migratory constraints on yolk precursor production. We predicted that if yolk precursors are constrained, androgen transport to developing yolks would be similarly constrained. We reveal positive linear relationships between maternal VTG and androgens in small A-eggs but not larger B-eggs, which is consistent with a migratory constraint operating on the A-egg. Results suggest that intra-clutch variation in total yolk androgen levels depends on the production and uptake of yolk precursors. The brood reduction strategy common to Eudyptes might thus be best described as the result of a migratory constraint.
Data from: Reconstructing the migratory behavior and long-term survivorship of juvenile Chinook salmon under contrasting hydrologic regimes
The loss of genetic and life history diversity has been documented across many taxonomic groups, and is considered a leading cause of increased extinction risk. Juvenile salmon leave their natal rivers at different sizes, ages and times of the year, and it is thought that this life history variation contributes to their population sustainability, and is thus central to many recovery efforts. However, in order to preserve and restore diversity in life history traits, it is necessary to first understand how environmental factors affect their expression and success. We used otolith 87Sr/86Sr in adult Chinook salmon (Oncorhynchus tshawytcha) returning to the Stanislaus River in the California Central Valley (USA) to reconstruct the sizes at which they outmigrated as juveniles in a wetter (2000) and drier (2003) year. We compared rotary screw trap-derived estimates of outmigrant timing, abundance and size with those reconstructed in the adults from the same cohort. This allowed us to estimate the relative survival and contribution of migratory phenotypes (fry, parr, smolts) to the adult spawning population under different flow regimes. Juvenile abundance and outmigration behavior varied with hydroclimatic regime, while downstream survival appeared to be driven by size- and time-selective mortality. Although fry survival is generally assumed to be negligible in this system, >20% of the adult spawners from outmigration year 2000 had outmigrated as fry. In both years, all three phenotypes contributed to the spawning population, however their relative proportions differed, reflecting greater fry contributions in the wetter year (23% vs. 10%) and greater smolt contributions in the drier year (13% vs. 44%). These data demonstrate that the expression and success of migratory phenotypes vary with hydrologic regime, emphasizing the importance of maintaining diversity in a changing climate.
Data from: Rainfall and habitat interact to affect the condition of a wintering migratory songbird in The Bahamas
On the subtropical and tropical wintering grounds of migratory birds, variation in moisture levels and habitat can influence the availability of food resources and subsequently impact overwintering birds. Using stable carbon isotopes in blood samples as a measure of moisture, we assessed the interactive effects of rainfall, vegetation, and moisture on the demographics and condition of Prairie Warblers (Setophaga discolor) wintering in The Bahamas. Carbon isotopes in Prairie Warbler blood were more depleted in taller, wetter habitats; we additionally detected novel temporal effects of rainfall on isotope values. During a winter with more rainfall, most birds maintained mass and pectoral muscle regardless of the habitat type occupied. In a winter with less rainfall, birds lost mass and pectoral muscle, and this effect was more pronounced in birds with enriched isotope values and birds that occupied drier, shorter habitat. Prairie Warblers exhibited strong patterns of sexual habitat segregation with males disproportionately observed in areas with taller vegetation and females in shorter vegetation. During the drier winter, older males had better maintenance of pectoral muscle compared to females and younger individuals. Also in the drier winter, daily rainfall patterns explained more of the variation in body condition compared to the date of capture; pectoral muscle was best explained by recent precipitation (during the previous 30 days), while size‐corrected mass was more a function of longer‐term (90‐day) rainfall and habitat moisture. Our findings along with other studies suggest that Prairie Warblers and other migratory birds are sensitive to interactions between annual variation in winter rainfall, within‐season daily rainfall patterns, and habitat quality. Increasing drought and habitat loss in the Caribbean may be having a negative impact on wintering bird populations. To best conserve Nearctic–Neotropical migratory passerines in the region, we recommend prioritizing the protection of the least drought‐prone wintering areas.
Where to spend the winter? The role of intraspecific competition and climate in determining the selection of wintering areas by migratory caribou
<p>Depicted as predictable movements, migrations can, however, show important interannual variations, making the conservation of migratory species particularly challenging. Plasticity in migratory behaviour allows individuals to adjust their migratory tactics to maximize their fitness. Destination of migration, and therefore migration patterns, may vary according to climatic and environmental conditions encountered during migration or at the arrival site but also according to competition. In Northern-Québec and Labrador, Canada, fall migration patterns of caribou from the Rivière-George (RGH) and the Rivière-aux-Feuilles (RFH) herds have varied greatly during the last decades. Meanwhile, both herds have shown large fluctuations in abundance. We assessed the influence of environmental factors and changes in population size on wintering area selection. Based on 649 fall migrations of 284 females equipped with ARGOS collars, we used a machine-learning algorithm, the random forests, to assess how climate, resources and population size affected the selection of four different wintering areas. Individuals followed over several years switched to a different wintering area 45% of the time between consecutive years, and this probability increased at high population size. The main determinant of wintering area selection was the population size for both herds, suggesting intra- and inter-herd competition for wintering areas. The long migrations of RGH toward the western wintering areas, also used by RFH, were favoured when the herd was abundant and when the availability of resources was low at the departure. The migrations of RFH toward the south-western area increased as RGH declined, possibly because the past presence of RGH in this area reduced access for caribou from RFH. These results highlight the flexibility in the migratory behaviour of caribou in response to variation in competition. Our study is the first to suggest that wintering area selection can be determined by competition between populations of the same ungulate species.</p>
Data from: Inter-annual variation and long-term trends in proportions of resident individuals in partially migratory birds
Partial migration – a part of a population migrates and another part stays resident year-round on the breeding site – is probably the most common type of migration in the animal kingdom, yet it has only lately garnered more attention. Theoretical studies indicate that in partially migratory populations, the proportion of resident individuals (PoR) should increase in high latitudes in response to the warming climate, but empirical evidence exists for few species. We provide the first comprehensive overview of the environmental factors affecting PoR and the long-term trends in PoR by studying 27 common partially migratory bird species in Finland. The annual PoR values were calculated by dividing the winter bird abundance by the preceding breeding abundance. First, we analysed whether early-winter temperature, winter temperature year before or the abundance of tree seeds just before overwintering explains the interannual variation in PoR. Secondly, we analysed the trends in PoR between 1987 and 2011. Early-winter temperature explained the interannual variation in PoR in the waterbirds (waterfowl and gulls), most likely because the temperature affects the ice conditions and thereby the feeding opportunities for the waterbirds. In terrestrial species, the abundance of seeds was the best explanatory variable. Previous winter's temperature did not explain PoR in any species, and thus, we conclude that the variation in food availability caused the interannual variation in PoR. During the study period, PoR increased in waterbirds, but did not change in terrestrial birds. Partially migratory species living in physically contrasting habitats can differ in their annual and long-term population-level behavioural responses to warming climate, possibly because warm winter temperatures reduce ice cover and improve the feeding possibilities of waterbirds but do not directly regulate the food availability for terrestrial birds.
Data from: When and where does mortality occur in migratory birds? Direct evidence from long-term satellite tracking of raptors
1. Information about when and where animals die is important to understand population regulation. In migratory animals, mortality might occur not only during the stationary periods (e.g. breeding and wintering) but also during the migration seasons. However, the relative importance of population limiting factors during different periods of the year remains poorly understood, and previous studies mainly relied on indirect evidence. 2. Here we provide direct evidence about when and where migrants die by identifying cases of confirmed and probable deaths in three species of long-distance migratory raptors tracked by satellite telemetry. 3. We show that mortality rate was about six times higher during migration seasons than during stationary periods. However, total mortality was surprisingly similar between periods, which can be explained by the fact that risky migration periods are shorter than safer stationary periods. Nevertheless, more than half of the annual mortality occurred during migration. We also found spatiotemporal patterns in mortality: spring mortality occurred mainly in Africa in association with the crossing of the Sahara desert, while most mortality during autumn took place in Europe. 4. Our results strongly suggest that events during the migration seasons have an important impact on the population dynamics of long-distance migrants. We speculate that mortality during spring migration may account for short-term annual variation in survival and population sizes, while mortality during autumn migration may be more important for long-term population regulation (through density dependent effects).
Data from: Wintering areas predict age-related breeding phenology in a migratory passerine bird
Understanding connections between breeding, stopover and wintering grounds for long-distance migratory birds can provide important insight into factors influencing demography and the strength of carry-over effects among various periods of the annual cycle. Using previously described, multi-isotope (δ13C, δ15N, δ2H) feather isoscapes for Africa, we identified the most probable wintering areas for house martins (Delichon urbica) breeding at Badajoz in southwestern Spain. We identified two most-probable wintering areas differing in latitude in West Africa. We found that the probability to winter in the northern region was related to age and sex of individuals. Specifically, experienced males (i.e., two years or older) winter in the northern area with a greater probability than experienced females, whereas first-year females winter in the northern area with a greater probability than first-year males. In addition, wintering area was correlated with breeding phenology, with individuals wintering in the northern area initiating their clutches earlier than those wintering in the southern area. For birds wintering in the northern area, there was no relationship between age and clutch initiation date. In contrast, young birds wintering in the southern area initiated their clutches earlier than experienced birds wintering in this area. There was no significant correlation between wintering area and clutch size or the number of fledglings produced. We hypothesize that the relationship among social status, population density and winter habitat quality should be the most important driver of the carry-over effect we found for this population
Data from: The eastern migratory caribou: the role of genetic introgression in ecotype evolution
Understanding the evolutionary history of contemporary animal groups is essential for conservation and management of endangered species like caribou (Rangifer tarandus). In central Canada, the ranges of two caribou subspecies (barren-ground/woodland caribou) and two woodland caribou ecotypes (boreal/eastern migratory) overlap. Our objectives were to reconstruct the evolutionary history of the eastern migratory ecotype and to assess the potential role of introgression in ecotype evolution. STRUCTURE analyses identified five higher order groups (i.e. three boreal caribou populations, eastern migratory ecotype and barren-ground). The evolutionary history of the eastern migratory ecotype was best explained by an early genetic introgression from barren-ground into a woodland caribou lineage during the Late Pleistocene and subsequent divergence of the eastern migratory ecotype during the Holocene. These results are consistent with the retreat of the Laurentide ice sheet and the colonization of the Hudson Bay coastal areas subsequent to the establishment of forest tundra vegetation approximately 7000 years ago. This historical reconstruction of the eastern migratory ecotype further supports its current classification as a conservation unit, specifically a Designatable Unit, under Canada's Species at Risk Act. These findings have implications for other sub-specific contact zones for caribou and other North American species in conservation unit delineation.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.