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2,394 results for “ms”
GC-MS Data (CYPHEX)
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Laser ablation depth profile data for different IODP and ODP Sites and age intervals from Voigt et al. "Assessing the recrystallisation of planktonic foraminifera in Pelagic sediments and the reliability of Mg/Ca values with Laser Ablation (LA-) ICP-MS"
<p>These files contain the final processed laser ablation ICP-MS depth profiles of Mg/Ca and Sr/Ca through the shell walls of fossil planktonic foraminifera tests from specific time intervals from International Ocean Discovery Program (IODP) Sites U1334, U1335, U1336, U1337, U1338 and Ocean Drilling Program (ODP) SIte 1218 in the eastern equatorial Pacific.</p> <p>These data are from Voigt et al. "Assessing the recrystallisation of planktonic foraminifera in Pelagic sediments and the reliability of Mg/Ca values with Laser Ablation (LA-) ICP-MS", a manuscript submitted to the journal <em>Paleoceanography and Paleoclimatology</em></p>
LC-MS data for Hirschi et al. (2024)
<p>Additional data related to the LC-MS experiments (Suppl. Figs. 7 and 8). MRM method, calibration curves and quantifications as well as .wiff files.</p>
msproteomics sitereport: reporting DIA-MS phosphoproteomics experiments at site level with ease
<p>Data associated with the paper</p> <p>Pham TV, Henneman AA, Truong NX, Jimenez CR, msproteomics sitereport: reporting DIA-MS phosphoproteomics experiments at site level with ease, <em>Bioinformatics</em>, 2024;btae432, https://doi.org/10.1093/bioinformatics/btae432</p> <p>olsen-directDIA-SN.sne<br> - Spectronaut 18 search of the Olsen dataset.</p> <p>PXD014525-sn-18-olsen.zip<br> - text export of olsen-directDIA-SN.sne</p> <p>20220530_113551_Phospho_optimal_dia-PASEF_21min_v16_Report.zip<br> - Spectronaut 16 output of the data in PXD034128</p> <p>Phospho_EGF_diAID.zip<br> - DIA-NN 1.8 output of the data in PXD034128</p> <p>PXD034128-diann-1.8.2-beta27.zip<br> - DIA-NN 1.8.1 search of the data in PXD034128</p> <p>20231106_133349_optimal4.sne<br> - Spectronaut 18 search of the data in PXD034128</p> <p>PXD034128-sn-18.zip<br> - text export of 20231106_133349_optimal4.sne</p> <p>uniprot-reviewed_yes_AND_organism__Homo_sapiens__Human___9606___--.zip<br> - protein sequences</p> <p>ptm.rs<br> - Spectronaut report export scheme</p>
Nasal organoids as optimal models for studying structure and function of primary nasal epithelial cell cultures - DIA-MS Dataset
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Raw GC-TOF-MS data from individuals sampled in allopatric zones (see Methods) from Doniol-Valcroze et al.
<p>Raw .MZML data from GC-TOF-MS analysis of Cuticular compounds of the four species of the <em>Coenonympha </em><em>arcania-gardetta</em> hybrid species complex.</p> <p>Samples are labelled with letters as follow: Species_Sex__Extract-type_SampleID. Species: A= <em>C. arcania</em>; G= <em>C. gardetta</em>; D= <em>C. darwiniana</em>; C= <em>C. cephalidarwiniana</em>. Sex: M= male; F= female. Extract type: b= Full body extract; w= Wing extract.</p>
TIMS²Rescore: A DDA-PASEF optimized data-driven rescoring pipeline based on MS²Rescore
<p>Code and datasets for the "TIMS²Rescore: A DDA-PASEF optimized data-driven rescoring pipeline based on MS²Rescore" manuscript (https://doi.org/10.1101/2024.05.29.596400) </p>
MS data linked to manuscript: https://doi.org/10.1038/s41598-023-43300-w
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MS data linked to manuscript: https://doi.org/10.3390/cells12071065
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MS data linked to manuscript: https://doi.org/10.3390/pharmaceutics13122121
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MS data linked to manuscript: https://doi.org/10.3390/pharmaceutics15020700
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MS data linked to manuscript: https://doi.org/10.1093/nar/gkac1049
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MS data linked to manuscript: https://doi.org/10.3390/pharmaceutics15020700
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U-Pb-Th SHRIMP & LA-ICP-MS complementary data of "The bimodal Fii-A2-type and calc-alkaline volcanic sequence of the Aljustrel brownfield region, Iberian Pyrite Belt, SW Iberian Massif"
<p>U-Pb-Th complementary data of "The bimodal Fii-A2-type and calc-alkaline volcanic sequence of the Aljustrel brownfield region, Iberian Pyrite Belt, SW Iberian Massif" <a title="Persistent link using digital object identifier" href="https://doi.org/10.1016/j.chemer.2023.126049" target="_blank" rel="noreferrer noopener"><span><span>https://doi.org/10.1016/j.chemer.2023.126049</span></span></a></p>
Supplementary material 1 from: Doorenweerd C, Leblanc L, Norrbom AL, Jose MS, Rubinoff D (2018) A global checklist of the 932 fruit fly species in the tribe Dacini (Diptera, Tephritidae). ZooKeys 730: 19-56. https://doi.org/10.3897/zookeys.730.21786
A global checklist of the 932 fruit fly species in the tribe Dacini (Diptera: Tephritidae), spreadsheet table. :
Supplementary material 5 from: Rix MG, Huey JA, Cooper SJB, Austin AD, Harvey MS (2018) Conservation systematics of the shield-backed trapdoor spiders of the nigrum-group (Mygalomorphae, Idiopidae, Idiosoma): integrative taxonomy reveals a diverse and threatened fauna from south-western Australia. ZooKeys 756: 1-121. https://doi.org/10.3897/zookeys.756.24397
COI p-distances : Explanation note: Spreadsheet with matrix of COI p-distances for 61 sequenced specimens of Idiosoma in the nigrum-group, along with a summary of mean inter- and intra-specific p-distances.
Supplementary material 2 from: Rix MG, Huey JA, Cooper SJB, Austin AD, Harvey MS (2018) Conservation systematics of the shield-backed trapdoor spiders of the nigrum-group (Mygalomorphae, Idiopidae, Idiosoma): integrative taxonomy reveals a diverse and threatened fauna from south-western Australia. ZooKeys 756: 1-121. https://doi.org/10.3897/zookeys.756.24397
GenBank data : Explanation note: Spreadsheet of specimens sequenced for the molecular analyses, with associated collection data and GenBank accession numbers.
Supplementary material 1 from: Rix MG, Huey JA, Cooper SJB, Austin AD, Harvey MS (2018) Conservation systematics of the shield-backed trapdoor spiders of the nigrum-group (Mygalomorphae, Idiopidae, Idiosoma): integrative taxonomy reveals a diverse and threatened fauna from south-western Australia. ZooKeys 756: 1-121. https://doi.org/10.3897/zookeys.756.24397
Atlas of morphology : Explanation note: Atlas of morphology for shield-backed trapdoor spiders of the Idiosoma nigrum-group, illustrating a representative selection of male specimens for each species, in five standard views.
Supplementary material 2 from: Knapp S, Vorontsova MS, Särkinen T (2019) Dichotomous keys to the species of Solanum L. (Solanaceae) in continental Africa, Madagascar (incl. the Indian Ocean islands), Macaronesia and the Cape Verde Islands. PhytoKeys 127: 39-76. https://doi.org/10.3897/phytokeys.127.34326
Supplementary material 2 from: Knapp S, Vorontsova MS, Särkinen T (2019) Dichotomous keys to the species of Solanum L. (Solanaceae) in continental Africa, Madagascar (incl. the Indian Ocean islands), Macaronesia and the Cape Verde Islands. PhytoKeys 127: 39-76. https://doi.org/10.3897/phytokeys.127.34326
Supplementary material 1 from: Knapp S, Vorontsova MS, Särkinen T (2019) Dichotomous keys to the species of Solanum L. (Solanaceae) in continental Africa, Madagascar (incl. the Indian Ocean islands), Macaronesia and the Cape Verde Islands. PhytoKeys 127: 39-76. https://doi.org/10.3897/phytokeys.127.34326
Supplementary material 1 from: Knapp S, Vorontsova MS, Särkinen T (2019) Dichotomous keys to the species of Solanum L. (Solanaceae) in continental Africa, Madagascar (incl. the Indian Ocean islands), Macaronesia and the Cape Verde Islands. PhytoKeys 127: 39-76. https://doi.org/10.3897/phytokeys.127.34326
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.