Skip to main content
Powered by ShareScore

Find research datasets worth reusing

Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.

1,353

datasets available to search

ShareScore release 0.9.0

Reset

Dataset results

1,353 results for “single-cell transcriptomics”

Learn how ShareScore rates datasets ↗
geo24/100

Comparative single-cell transcriptomic profiling of patient-derived renal carcinoma cells in cellular and animal models of kidney cancer

GEO Series GSE272610. Homo sapiens. 5 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenApr 2025View details →
geo24/100

Single-cell transcriptomic comparison of young and aged dermal macrophages

GEO Series GSE275826. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2025View details →
geo24/100

Single-Cell Transcriptomics Identifies TOX as a Key Transcriptional Regulator of Progenitor-Like CD8 T Cells in Chronic Infection [single-cell RNA-seq]

GEO Series GSE119940. Mus musculus. 10 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenApr 2019View details →
geo24/100

Precursors of human CD4+ cytotoxic T lymphocytes identified by single-cell transcriptome analysis [bulk RNA-seq]

GEO Series GSE106542. Homo sapiens. 40 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2018View details →
geo24/100

Single-cell transcriptome analysis of avian neural crest migration reveals signatures of invasion and molecular transitions [scRNA-seq]

GEO Series GSE108221. Gallus gallus. 501 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2017View details →
geo24/100

An Atlas of Immune Cell Exhaustion in HIV-Infected Individuals Revealed by Single-Cell Transcriptomics

GEO Series GSE157829. Homo sapiens. 7 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenSep 2020View details →
geo24/100

Integrated Single-Cell and Spatial Transcriptomics Uncover Distinct Cellular Subtypes Involved in Neural Invasion in PDAC [TCR-Seq]

GEO Series GSE300435. Homo sapiens. 30 samples. Type: Other.

openGEO-OpenJun 2025View details →
geo24/100

Integrated Spatial Transcriptomics and Single-Cell RNA Sequencing Reveal Lars2-Mediated Spatiotemporal Dynamics of Myocardial Remodeling in a Mouse Model of Transverse Aortic Constriction (TAC)

GEO Series GSE308859. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing; Other.

openGEO-OpenFeb 2026View details →
geo24/100

Single-Cell Transcriptomic Analysis of Dental Pulp and Periodontal Ligament Stem Cells [scRNA-seq]

GEO Series GSE227731. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2023View details →
geo24/100

Single-Cell Transcriptomics Identifies Pituitary Gland Population Changes in Diet-Induced Obesity

GEO Series GSE240022. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2024View details →
geo24/100

Decoding the Effects of Bexarotene treatment on brain of AD-like model mice: A Single-Cell Transcriptomic and Chromatin Accessibility Analysis [scRNA-seq]

GEO Series GSE283905. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2025View details →
geo24/100

Transcriptomic analysis of ChAdOx/MVA P1A vaccine-induced P1A-35-43-specific CD8+ T-cells by single-cell RNA-sequencing

GEO Series GSE181183. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenAug 2021View details →
geo24/100

Single-cell Transcriptomics reveals multi-step adaptations to endocrine therapy

GEO Series GSE122743. Homo sapiens. 14 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJul 2019View details →
geo24/100

Single-cell transcriptome analysis of human natural killer cells derived from umbilical cord blood in response to the BCL-2 inhibitor venetoclax

GEO Series GSE237923. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJul 2023View details →
geo24/100

Single-cell transcriptomes of CD8+ T cells from patients with HR-MDS and AML

GEO Series GSE250077. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2024View details →
geo24/100

Integrating spatial and single-cell transcriptomics to characterize mouse long bone fracture healing process

GEO Series GSE297119. Mus musculus. 3 samples. Type: Other.

openGEO-OpenMay 2025View details →
geo24/100

Single-cell transcriptomics reveal a hyperacute cytokine and immune checkpoint axis after cardiac arrest in patients with poor neurological outcome

GEO Series GSE200117. Homo sapiens. 152 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJun 2023View details →
geo24/100

Comparative spatial transcriptomic and single-cell analyses of human nail units and hair follicles demonstrate transcriptional similarities between the onychodermis and follicular dermal papilla

GEO Series GSE193269. Homo sapiens. 21 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJul 2022View details →
geo24/100

Single-cell transcriptomic analysis of the scrib mutant wing imaginal discs

GEO Series GSE130566. Drosophila melanogaster. 4 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenAug 2019View details →
geo24/100

Single-cell transcriptomes of the aging human skin reveal loss of fibroblast priming

GEO Series GSE130973. Homo sapiens. 5 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2020View details →

ScienceDex guides

Understand access before you commit

These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

Compare curated datasets

Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record

ScienceDex for faculty

Your academic CV and NIH biosketch

Make your CV in your school's format and your NIH biosketch from it, then download both as Word files.