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Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
695
datasets available to search
ShareScore release 0.7.1
Dataset results
695 results for “topologies”
Liebenberg syndrome severity arises from variations in Pitx1 locus topology and ectopically transcribing cells
GEO Series GSE256339. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Condensin-Driven Remodeling of X-Chromosome Topology during Dosage Compensation [RNA-Seq]
GEO Series GSE59715. Caenorhabditis elegans. 7 samples. Type: Expression profiling by high throughput sequencing.
Stag1 and Stag2 regulate cell fate decisions in hematopoiesis through non-redundant topological control [II]
GEO Series GSE134997. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Identification of topologically associated domains (TADs) in peripheral blood CD34+ cells
GEO Series GSE188940. Homo sapiens. 2 samples. Type: Other.
Characterisation by Next generation Capture-C of Pax6 locus in a mouse cell line with bleomycin treatment to relieve topological stress
GEO Series GSE235335. Mus musculus. 8 samples. Type: Other.
Cohesin Members Stag1 and Stag2 Display Distinct Roles in Chromatin Accessibility and Topological Control of HSC Self-Renewal and Differentiation [RNA_LinNegBM]
GEO Series GSE138007. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Liebenberg syndrome severity arises from variations in Pitx1 locus topology and ectopically transcribing cells
GEO Series GSE259212. Mus musculus. 42 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Chromatin Topology Reorganization and Transcription Repression by PML/RARα in Acute Promyeloid Leukemia (ChIA-PET)
GEO Series GSE137661. Homo sapiens. 12 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Spatial transcriptomics reveal topological immune landscapes of Asian head and neck angiosarcoma
GEO Series GSE227469. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing; Other.
Two unrelated distal genes activated by a shared enhancer benefit from localizing inside the same small topological domain [CRISPRi RNA-seq]
GEO Series GSE284650. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Conserved Topological Domains in Mammalian Genomes Identified by High-resolution Analysis of Chromatin Interactions
GEO Series GSE35156. Homo sapiens; Mus musculus. 9 samples. Type: Other.
Applied topology delineates developmental progression with single-cell resolution
GEO Series GSE94883. Mus musculus. 2744 samples. Type: Expression profiling by high throughput sequencing.
Clock-dependent chromatin topology modulates circadian transcription and behavior
GEO Series GSE101423. Mus musculus. 221 samples. Type: Expression profiling by high throughput sequencing; Other.
Topological isolation as a mechanism for precise control of developmental regulators in mammalian genomes [RNA-seq II]
GEO Series GSE165339. Homo sapiens. 15 samples. Type: Expression profiling by high throughput sequencing.
Setdb1 regulates Cohesin at H3K9me3-independent topological domains [RNA-Seq]
GEO Series GSE123190. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
In situ dissection of domain boundaries affects genome topology and gene transcription in Drosophila [Hi-C]
GEO Series GSE136104. Drosophila melanogaster. 13 samples. Type: Other.
On-target and Off-target Activities of RAG Are Restricted by Topological Chromatin Domains
GEO Series GSE73007. Mus musculus. 40 samples. Type: Other.
Genome-wide transcriptional, epigenetic, and topological changes occurring in human natural killer cells in response to HDAC inhibitor [ATAC-seq]
GEO Series GSE227661. Homo sapiens. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
DNA topology analysis reveals stable compartments and TADs in malignant and normal uveal melanocytes as novel molecular features of uveal melanoma
GEO Series GSE201727. Homo sapiens. 5 samples. Type: Other.
Phase separation of Epstein-Barr virus EBNA2 reorganizes chromatin topology for epigenetic regulation
GEO Series GSE158288. Homo sapiens. 25 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.