Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
20,299
datasets available to search
ShareScore release 0.9.0
Dataset results
20,299 results for “Systematic”
Figure 4 in Do mites eat and run? A systematic review of feeding and dispersal strategies
Figure 4. Relationship between the number of studies carried out on the dispersal syndrome of a given mite species and the proportion of dispersal modes revealed. The shaded region depicts 95% confidential intervals around the fit. Points are observed data points. Note the logarithmic scale on both axes.
Figure 1 in Do mites eat and run? A systematic review of feeding and dispersal strategies
Figure 1. Database collection summary. PRISMA (preferred reporting items for systematic reviews and meta-analyses) diagram detailing the procedure for the identification and inclusion of relevant publications.
Supplementary data for a systematic literature review on source code similarity measurement and clone detection: techniques, applications, and challenges
<p>The Microsoft Excel files containing the supplementary data and diagrams for the paper:</p> <p><strong>A systematic literature review on source code similarity measurement and clone detection: techniques, applications, and challenges</strong></p> <p>The article is under review in the Journal of Systems and Software.</p> <p>In this version, the literature search has been performed between April and May 2023, and studies published until that date has been mentioned in the attached Excel files.</p> <p>This version (v3.4.0) corresponds to the third revision (R3) of the manuscript.</p> <p> </p>
Supplementary materials to: Nano-Strainer: a workflow for identification of single-copy nuclear loci for plant systematic studies, using target capture kits and Oxford Nanopore long reads
<p>In the paper associated with this dataset, a workflow is presented which enables the identification of single-/low-copy nuclear molecular markers for a plant group of interest, by mining data from a small representative target capture experiment done using a commercial probe kit and Oxford Nanopore long-read sequencing. The proposed pipeline first assesses sequence variability contained in the data from targeted loci and assigns reads to their respective genes, via a combined BLAST/clustering procedure. Cluster consensus sequences are then examined based on four pre-defined criteria presumably indicative for absence of paralogy. This is done by calculating four specialized indices; loci are ranked according to their performance in these indices, and top-scoring loci are considered putatively single- or low-copy. The approach can be applied to any probe set. As it relies on long reads, the contribution also provides template workflows for processing Nanopore-based target capture data. Identified loci can be used for NGS amplicon sequencing. For detection of possibly remaining paralogy in these data, which might occur in groups with rampant paralogy, the long-read assembly tool CANU is employed. The presented workflow can be useful for researchers dealing with reticulate or polyploidization phylogenetic histories in plants.</p> <p>The present dataset contains several documents supplementing the original paper. Its most important elements are a detailed description (alongside two graphical workflow figures) of all methods employed in the study, suitable for reproducing the steps of the workflow and also the wet-lab work. The workflow employs a collection of BASH, Python and R scripts which is available here, together with a detailed account on command line use in Linux. Also, reference sequences for the identified markers can be found as well as sequence alignments derived from the amplicon sequencing.</p>
Figures 22–24. Hydryphantes prolongatus Thon, 1899 in On the systematic of the water mite Hydryphantes prolongatus Thon, 1899 (Acari, Hydrachnidia, Hydryphantidae)
Figures 22–24. Hydryphantes prolongatus Thon, 1899, deutonymph: 22 – II–Leg-4–5; 23 – IV–Leg-3–6; 24 – claw. Scale bars: 22–23 = 200µm, 24 = 50µm.
Figures 1–2. Hydryphantes prolongatus Thon, 1899 in On the systematic of the water mite Hydryphantes prolongatus Thon, 1899 (Acari, Hydrachnidia, Hydryphantidae)
Figures 1–2. Hydryphantes prolongatus Thon, 1899, larva: 1- dorsal view, 2- ventral view. Scale bar: 50µm.
Figures 3–8. Hydryphantes prolongatus Thon, 1899 in On the systematic of the water mite Hydryphantes prolongatus Thon, 1899 (Acari, Hydrachnidia, Hydryphantidae)
Figures 3–8. Hydryphantes prolongatus Thon, 1899, larva: 3–5 – excretory pore plate, 6 – capitulum, 7 – chelicera, dorsal view, 8 – pedipalp. Scale bars: 3–5, 8 = 20 µm, 6–7 = 50µm.
Figures 16–21. Hydryphantes prolongatus Thon, 1899 in On the systematic of the water mite Hydryphantes prolongatus Thon, 1899 (Acari, Hydrachnidia, Hydryphantidae)
Figures 16–21. Hydryphantes prolongatus Thon, 1899, deutonymph: 16 – frontal plate; 17 – genital field; 18 – fragment of integument; 19 – capitulum; 20 – chelicera; 21 – pedipalp. Scale bars: 16, 19–20 = 100µm, 17–18, 21 = 50 µm.
Figures 14–15. Hydryphantes prolongatus Thon, 1899 in On the systematic of the water mite Hydryphantes prolongatus Thon, 1899 (Acari, Hydrachnidia, Hydryphantidae)
Figures 14–15. Hydryphantes prolongatus Thon, 1899, deutonymph: 14 – dorsal view, 15 – ventral view. Scale bar: 200µm.
Figures 9–13. Hydryphantes prolongatus Thon, 1899 in On the systematic of the water mite Hydryphantes prolongatus Thon, 1899 (Acari, Hydrachnidia, Hydryphantidae)
Figures 9–13. Hydryphantes prolongatus Thon, 1899, larva: 9 – I–Leg-4–6; 10 – II–Leg-4–6; 11– III–Leg-4–6; 12 – claws of leg I; 13 – claws of leg III. Simple setae on I–III–Leg-4–6 are not shown. Scale bars: 100µm.
Figures 25–29. Hydryphantes prolongatus Thon, 1899 in On the systematic of the water mite Hydryphantes prolongatus Thon, 1899 (Acari, Hydrachnidia, Hydryphantidae)
Figures 25–29. Hydryphantes prolongatus Thon, 1899, adults: 25 – frontal plate; 26 – coxal plates; 27 – genital field; 28 –capitulum; 29 – pedipalp. Scale bars: 25–26, 28 = 200µm, 27, 29 = 100µm.
Probono - Systematic Review - Energy-related behaviours of building occupants.
<p>This database covers the relevant literature on energy-related behaviours of building occupants, based on a systematic interrogation of existing research from 2018-2022. Data is collected and presented on the study location, research method, building type and type of occupants, occcupants behaviour, etc. This dababase allows for investigating where occupant behaviours are likely to be most prevalent and targetable for future research in Probono.</p>
Selection process of articles for a systematic literature review on citizen science initiatives in school contexts
<p>Selection process of articles for a systematic literature review on citizen science initiatives in school contexts. Initial records are extracted from Web of Science database from 2000 to 2021. We used the keyword "citizen science" in the title mixed with some keywords in the topic of the search: “classroom” or “school” or “student*” or “pupil” or “learning”.</p> <p>The different database sheets inform about the application of the inclusion and exclusion criteria applied.</p>
Carbon configurations dataset generated in "A systematic approach to generating accurate neural network potentials: the case of carbon"
<p>This dataset contains 60133 configurations of Carbon as generated in the paper "A systematic approach to generating accurate neural network potentials: the case of carbon". The configurations represent crystal structures containing only Carbon atoms, ranging from 16 to 200 atoms in the unit cell, with energy and forces calculated through density functional theory. Please refer to the original paper for more details about the generation procedure and simulation parameters.</p> <p>The dataset consists of a compressed archive containing a single .xyz file with all configurations, with lattice and energy information contained in the comment line, and one line per atom with positions and forces. Lengths are in Angstroms and energies in eV.</p>
FIGURE 20 in Systematic Revision of the Whip Spider Family Paracharontidae (Arachnida: Amblypygi) with Description of a New Troglobitic Genus and Species from Colombia
FIGURE 20. Jorottui ipuanai, gen. et sp. nov., scanning electron micrographs of Ƌ and ♀ gonopods, dorsal aspect (A, B) and Ƌ gonopod lobes, dorsal (C), ventral (D) and anterior (E) aspects. A, C–F. Paratype Ƌ (ICN-Am 183). B. Paratype ♀ (ICN-Am 181). Scale bars: A, 500 µm; B, 80 µm; C–F, 200 µm
FIGURE 18 in Systematic Revision of the Whip Spider Family Paracharontidae (Arachnida: Amblypygi) with Description of a New Troglobitic Genus and Species from Colombia
FIGURE 18. Jorottui ipuanai, gen. et sp. nov., paratype ♀ (ICN-Am 181), scanning electron micrographs of dextral pedipalp tarsal claw and cleaning organ. A. Tarsus, lateral aspect. B. Tarsus claw tip, illustrating truncate apex and rounded ventral projection. C. Cleaning organ, ventral aspect. D. Ventral row of cleaning organ, setae. E. Dorsal row of cleaning organ, setae. F. Granular area. Scale bars: A, 250 µm; B, D, 25 µm; C, 200 µm; E, 15 µm; F, 20 µm.
FIGURE 16. Paracharontidae Weygoldt, 1996 in Systematic Revision of the Whip Spider Family Paracharontidae (Arachnida: Amblypygi) with Description of a New Troglobitic Genus and Species from Colombia
FIGURE 16. Paracharontidae Weygoldt, 1996, dextral pedipalp tibia, ventral (A, C, E) and dorsal (B, D, F) aspects. A, B. Paracharon caecus Hansen, 1921, lectotype ♀ (ZMUC 24556). C–F. Jorottui ipuanai, gen. et sp. nov. C, D. Holotype ♀ (ICN-Am 180). E, F. Paratype Ƌ (ICN-Am 187). Note that spine TiIII is present only on the dextral pedipalp, whereas a setiferous tubercle is present on the sinistral pedipalp (fig. 16A). Abbreviations: Ti1–5, tibia dorsal spines 1–5; TiI–IV, tibia ventral spines I–V. Scale bars: A, B, 0.5 mm; C, D, 1 mm; E, F, 1.5 mm.
FIGURE 15. Paracharontidae Weygoldt, 1996 in Systematic Revision of the Whip Spider Family Paracharontidae (Arachnida: Amblypygi) with Description of a New Troglobitic Genus and Species from Colombia
FIGURE 15. Paracharontidae Weygoldt, 1996, dextral pedipalp patella, ventral (A, C, E) and dorsal (B, D, F) aspects. A, B. Paracharon caecus Hansen, 1921, lectotype ♀ (ZMUC 24556). C–F. Jorottui ipuanai, gen. et sp. nov. C, D. Holotype ♀ (ICN-Am 180). E, F. Paratype Ƌ (ICN-Am 187). Abbreviations: P1–3, patella dorsal spines 1–3; PI–IV, patella ventral spines I–IV. Scale bars: A, B, 0.5 mm; C, D, 1 mm; E, F, 1.5 mm.
FIGURE 19. Paracharontidae Weygoldt, 1996, dextral leg IV in Systematic Revision of the Whip Spider Family Paracharontidae (Arachnida: Amblypygi) with Description of a New Troglobitic Genus and Species from Colombia
FIGURE 19. Paracharontidae Weygoldt, 1996, dextral leg IV, distal segment of basitibia and distitibia, retrolateral aspect, illustrating trichobothria. A. Paracharon caecus Hansen, 1921, lectotype ♀ (ZMUC 24556). B, C. Jorottui ipuanai, gen. et sp. nov. B. Holotype ♀ (ICN-Am 180). C. Paratype Ƌ (ICN-Am 187). Abbreviations: bf, basal frontal; bt, basitibial; sc, caudal series; sf, frontal series; tc, terminal caudal; tf, terminal frontal. Scale bars: A, 0.5 mm; B, C, 1 mm.
FIGURE 14. Paracharontidae Weygoldt, 1996 in Systematic Revision of the Whip Spider Family Paracharontidae (Arachnida: Amblypygi) with Description of a New Troglobitic Genus and Species from Colombia
FIGURE 14. Paracharontidae Weygoldt, 1996, dextral pedipalp femur, ventral (A, C, E) and dorsal (B, D, F) aspects. A, B. Paracharon caecus Hansen, 1921, lectotype ♀ (ZMUC 24556). C–F. Jorottui ipuanai, gen. et sp. nov. C, D. Holotype ♀ (ICN-Am 180). E, F. Paratype Ƌ (ICN-Am 187). Abbreviations: F1, 2, femur dorsal spines 1 and 2; FI–IV, femur ventral spines I–IV. Scale bars: A, B, 0.5 mm; C–F, 1 mm.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.