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12,393 results for “materiality”
Supplementary material 1 from: Jansen MA, Franz NM (2015) Phylogenetic revision of Minyomerus Horn, 1876 sec. Jansen & Franz, 2015 (Coleoptera, Curculionidae) using taxonomic concept annotations and alignments. ZooKeys 528: 1-133. https://doi.org/10.3897/zookeys.528.6001
Set of 13 Euler/X toolkit input data files: Explanation note: Set of 13 Euler/X toolkit input data files for all alignments produced for Minyomerus [JF2015] use case (Figs 3, 4). Each file is saved in txt format and contains annotations and instructions for run commands to yield the alignments and visualizations shown in the corresponding figures. Dryad. doi: 10.5061/dryad.53mv1
Supplementary material 4 from: Chetri M, Jhala YV, Jnawali SR, Subedi N, Dhakal M, Yumnam B (2016) Ancient Himalayan wolf (Canis lupus chanco) lineage in Upper Mustang of the Annapurna Conservation Area, Nepal. ZooKeys 582: 143-156. https://doi.org/10.3897/zookeys.582.5966
Median-joining networks of Himalayan wolf and related wolf and dog clades : Explanation note: Median-joining networks of Himalayan wolf and related wolf and dog clades. Golden jackal and Ethiopian wolf haplotypes are shown for comparison. Circle size and branches are proportional to sampled haplotype frequency and number of nucleotide mutation steps among haplotypes, respectively. Branch numbers refer to mutation steps separating individual haplotypes. Scat samples sequenced in this study are represented by arrows falling within the Himalayan wolf (HWF) and Indian feral dog (IDH) haplotypes. Nomenclature for the African wolf follows Koepfli et al. (2015).
Supplementary material 2 from: Chetri M, Jhala YV, Jnawali SR, Subedi N, Dhakal M, Yumnam B (2016) Ancient Himalayan wolf (Canis lupus chanco) lineage in Upper Mustang of the Annapurna Conservation Area, Nepal. ZooKeys 582: 143-156. https://doi.org/10.3897/zookeys.582.5966
Genebank sequences analysed in this study : Explanation note: GenBank accession numbers for sequences analyzed in this study.
Supplementary material 1 from: Chetri M, Jhala YV, Jnawali SR, Subedi N, Dhakal M, Yumnam B (2016) Ancient Himalayan wolf (Canis lupus chanco) lineage in Upper Mustang of the Annapurna Conservation Area, Nepal. ZooKeys 582: 143-156. https://doi.org/10.3897/zookeys.582.5966
Best model selection for Bayesian analysis : Explanation note: Estimating the best model of molecular substitution inferred using Log Bayes Factors (LBF) from Bayesian posterior distributions in Mr Bayes. Rate variation for tested models - gamma distributed rate variation across sites (gamma); gamma distributed with proportion of invariable sites (invgamma); rate variation with proportion of invariable sites (propinv); equal rate variation across sites (equal).
Supplementary material 1 from: Colihueque N, Gantz A, Rau JR, Parraguez M (2015) Genetic divergence analysis of the Common Barn Owl Tyto alba (Scopoli, 1769) and the Short-eared Owl Asio flammeus (Pontoppidan, 1763) from southern Chile using COI sequence. ZooKeys 534: 135-146. https://doi.org/10.3897/zookeys.534.5953
Pictures of external morphology of specimens of Tyto alba and Asio flammeus collected in southern Chile: Explanation note: Pictures of ventral and dorsal views of specimens showing plumage color and overall appearance. Data on body mass of these specimens are also provided.
Supplementary material 5 from: Waheed Z, Benzoni F, van der Meij SET, Terraneo TI, Hoeksema BW (2015) Scleractinian corals (Fungiidae, Agariciidae and Euphylliidae) of Pulau Layang-Layang, Spratly Islands, with a note on Pavona maldivensis (Gardiner, 1905). ZooKeys 517: 1-37. https://doi.org/10.3897/zookeys.517.9308
Figure S2: Explanation note: Variation of corallite form and structure in Pavona maldivensis (a, c, e), and Pavona explanulata (b, d, f). a specimen LAC23 from Layang-Layang, b specimen BAN01 from Banggi, North Borneo, c specimen LOY12 from Loyalty Islands, d specimen BAN02 from Banggi, North Borneo, e specimen MAL from the Maldives, and f specimen TER28 from Ternate, Indonesia.
Supplementary material 4 from: Waheed Z, Benzoni F, van der Meij SET, Terraneo TI, Hoeksema BW (2015) Scleractinian corals (Fungiidae, Agariciidae and Euphylliidae) of Pulau Layang-Layang, Spratly Islands, with a note on Pavona maldivensis (Gardiner, 1905). ZooKeys 517: 1-37. https://doi.org/10.3897/zookeys.517.9308
Figure S1: Explanation note: Maximum likelihood phylogram of Pavona maldivensis and Pavona explanulata. a mitochondrial intergenic spacer between CO1 and 16S-rRna. The sequence alignment consisted of 680 characters with 593 constant, 23 variable and 64 parsimony informative characters, b nuclear marker ITS1-5.8S-ITS2, with 680 characters of 649 constant, 14 variable and 17 parsimony informative characters. Support values for maximum likelihood, maximum parsimony (>70) and bayesian posterior probabilities (>80) are given at the nodes. Dashes (-) indicate nodes without statistical support.
Supplementary material 1 from: Scallion ML, Gibson GAP, Sharanowski BJ (2016) Revision of Paranastatus Masi (Eupelmidae, Eupelminae) with descriptions of four new species. ZooKeys 559: 59-79. https://doi.org/10.3897/zookeys.559.6134
Paranastatus Label Data : Explanation note: This file contains complete label data for all material examined, including localities
Supplementary material 3 from: Waheed Z, Benzoni F, van der Meij SET, Terraneo TI, Hoeksema BW (2015) Scleractinian corals (Fungiidae, Agariciidae and Euphylliidae) of Pulau Layang-Layang, Spratly Islands, with a note on Pavona maldivensis (Gardiner, 1905). ZooKeys 517: 1-37. https://doi.org/10.3897/zookeys.517.9308
Table S3: Explanation note: Species occurrence of hard coral families Fungiidae, Agariciidae and Euphylliidae at Pulau Layang-Layang.
Supplementary material 1 from: Mitchell JD, Daly DC (2015) A revision of Spondias L. (Anacardiaceae) in the Neotropics. PhytoKeys 55: 1-92. https://doi.org/10.3897/phytokeys.55.8489
Exsiccatae of Spondias in the Neotropics: Explanation note: Index of collectors, collector numbers, and corresponding Spondias species.
Supplementary material 3 from: Chetri M, Jhala YV, Jnawali SR, Subedi N, Dhakal M, Yumnam B (2016) Ancient Himalayan wolf (Canis lupus chanco) lineage in Upper Mustang of the Annapurna Conservation Area, Nepal. ZooKeys 582: 143-156. https://doi.org/10.3897/zookeys.582.5966
Aligned CR sequences of selected samples of wolves and dogs from GenBank, with the obtained scat samples : Explanation note: Aligned CR sequences of selected samples of wolves, dogs from GenBank, with scat samples obtained in this study. Numbers refer to mtDNA nucleotide positions referenced with respect to the complete mtDNA genome of gray wolf (GenBank Accession No. KF857179). Scat sequences D2137, D2138, D2139 and D2143 match each other differs from known Himalayan wolf haplotypes by at least two substitutions, while D2140 completely matches domestic dog and a wolf sequence in GenBank.
Supplementary material 1 from: Katz AD, Giordano R, Soto-Adames F (2015) Taxonomic review and phylogenetic analysis of fifteen North American Entomobrya (Collembola, Entomobryidae), including four new species. ZooKeys 525: 1-75. https://doi.org/10.3897/zookeys.525.6020
Morphology matrix: Explanation note: Alignment nexus file for all morphological characters used for phylogentic analysis. This file is optimized for viewing in mesquite and includes all character state information.
Supplementary material 2 from: Waheed Z, Benzoni F, van der Meij SET, Terraneo TI, Hoeksema BW (2015) Scleractinian corals (Fungiidae, Agariciidae and Euphylliidae) of Pulau Layang-Layang, Spratly Islands, with a note on Pavona maldivensis (Gardiner, 1905). ZooKeys 517: 1-37. https://doi.org/10.3897/zookeys.517.9308
Table S2: Explanation note: Coral samples included in the molecular analyses with supporting collection and locality data.
Supplementary material 4 from: Aketarawong N, Isasawin S, Sojikul P, Thanaphum S (2015) Gene flow and genetic structure of Bactrocera carambolae (Diptera, Tephritidae) among geographical differences and sister species, B. dorsalis, inferred from microsatellite DNA data. In: De Meyer M, Clarke AR, Vera MT, Hendrichs J (Eds) Resolution of Cryptic Species Complexes of Tephritid Pests to Enhance SIT Application and Facilitate International Trade. ZooKeys 540: 239-272. https://doi.org/10.3897/zookeys.540.10058
Comparisons among three different the individual admixture plots: Explanation note: Comparisons among the individual admixture plots of 289 individuals, for K = 3, considering correlated allele frequency, uncorrelated allele frequency, and missing data as recessive homozygotes for the null alleles, respectively.
Supplementary material 1 from: Biström O, Nilsson AN, Bergsten J (2015) Taxonomic revision of Afrotropical Laccophilus Leach, 1815 (Coleoptera, Dytiscidae). ZooKeys 542: 1-379. https://doi.org/10.3897/zookeys.542.5975
Georeferenced locality data for studied African Laccophilus species: Explanation note: Tabulation of locality data with coordinates including all species records mapped in our revision of African Laccophilus (Coleoptera: Dytiscidae). Coordinates given as decimal latitude and longitude.
Supplementary material 1 from: Schmidt BC (2015) Revision of the Lacinipolia vicina (Grote) complex (Noctuidae, Noctuinae, Eriopygini). In: Schmidt BC, Lafontaine JD (Eds) Contributions to the systematics of New World macro-moths VI. ZooKeys 527: 103-126. https://doi.org/10.3897/zookeys.527.9686
Table S1. Specimen data for mtDNA barcode vouchers: Explanation note: Haplogroup numbers refer to those given in Fig. 75. Abbreviations for specimen depositories are as given in Methods and materials section.
Supplementary material 3 from: Leblanc L, San Jose M, Barr N, Rubinoff D (2015) A phylogenetic assessment of the polyphyletic nature and intraspecific color polymorphism in the Bactrocera dorsalis complex (Diptera, Tephritidae). In: De Meyer M, Clarke AR, Vera MT, Hendrichs J (Eds) Resolution of Cryptic Species Complexes of Tephritid Pests to Enhance SIT Application and Facilitate International Trade. ZooKeys 540: 339-367. https://doi.org/10.3897/zookeys.540.9786
Figure S3: Explanation note: Maximum likelihood tree, based the period gene dataset. Support values above branches are Maximum Likelihood Bootstrap values / Bayesian Posterior Probabilities. Scale bar indicates the number of substitutions per site. Species in the Oriental fruit fly complex are outlined in red.
Supplementary material 3 from: Aketarawong N, Isasawin S, Sojikul P, Thanaphum S (2015) Gene flow and genetic structure of Bactrocera carambolae (Diptera, Tephritidae) among geographical differences and sister species, B. dorsalis, inferred from microsatellite DNA data. In: De Meyer M, Clarke AR, Vera MT, Hendrichs J (Eds) Resolution of Cryptic Species Complexes of Tephritid Pests to Enhance SIT Application and Facilitate International Trade. ZooKeys 540: 239-272. https://doi.org/10.3897/zookeys.540.10058
Component data at the four successive thresholds used to illustrate Figure 6: Explanation note: Component data are used to illustrate the structure of the subset of the Salaya5 strain and wild populations. The highest Betweenness-centrality is highlighted in blue.
Supplementary material 2 from: Hogendoorn K, Stevens M, Leijs R (2015) DNA barcoding of euryglossine bees and the description of new species of Euhesma Michener (Hymenoptera, Colletidae, Euryglossinae). ZooKeys 520: 41-59. https://doi.org/10.3897/zookeys.520.6185
Phylogenetic relationships of euryglossine species based on CO1 sequence data: Explanation note: tree based on CO1 sequence data.
Supplementary material 1 from: Li S, Ricchiardi E, Bai M, Yang X (2016) A taxonomy review of Oreoderus Burmeister, 1842 from China with a geometric morphometric evaluation (Coleoptera, Scarabaeidae, Valgini). ZooKeys 552: 67-89. https://doi.org/10.3897/zookeys.552.6096
Figure A.1 Minimum spanning tree mapped onto a PCA plot; Table A.1–4 Difference in shapes of four characters among species. :
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
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DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.