Find research datasets worth reusing

Figure 1 from: Pinzón-Florián O (2020) First report on the gall wasp Ophelimus near migdanorum (Hymenoptera, Eulophidae) and its parasitoid Closterocerus chamaeleon (Hymenoptera, Eulophidae) in Eucalyptus globulus in Bogotá, Colombia. ZooKeys 902: 151-156. https://doi.org/10.3897/zookeys.902.39213

Figure 1 Different stages of gall development on E. globulus foliage. A Initial stage B fully developed galls C fully developed galls in the petiole. Scale bar: 1 mm.

Figure 3 from: Pinzón-Florián O (2020) First report on the gall wasp Ophelimus near migdanorum (Hymenoptera, Eulophidae) and its parasitoid Closterocerus chamaeleon (Hymenoptera, Eulophidae) in Eucalyptus globulus in Bogotá, Colombia. ZooKeys 902: 151-156. https://doi.org/10.3897/zookeys.902.39213

Figure 3 Closterocerus chamaeleon emerged from mature E. globulus leaves infested by Ophelimus sp. A Dorsal view B lateral view. Scale bars: 1 mm.

opencc-zeroJan 2020View details →

IODP Expedition 361 Interstitial water composite report

This composite report includes data from numerous interstitial water (IW) analyses (e.g., ICP-LIQUIDS and IONCHROM) in a variable set of columns. Each row combines the data from several tests (groups of measurements made on the same sample at the same time) for a particular IW sample. If data do not exist for a particular expedition, the column does not appear. To identify individual samples and tests, see each separate analysis (ALKALINITY, ICP-LIQUIDS, IONCHROM, SALINITY, SPECTRO, TITRATOR, and potentially others). Major and minor elements were determined by inductively coupled plasma-atomic emission spectrocsopy (ICP-LIQUIDS). Cations and anions were measured by ion chromatography (IONCHROM). Complex ions were measured by colorimetric measurements using a UV-VIS spectrometer (SPECTRO). Alkalinity and chloride was measured by titration (ALKALINITY and TITRATOR). Dissolved carbon (DC), dissolved inorganic carbon (DIC), and dissolved organic carbon (DOC) were measured by combustion in a total organic carbon (TOC) analyzer. Salinity was measured by refractometer (SALINITY). pH was measured by ion-selective electrode as part of the alkalinity procedure and is reported in the ALKALINITY analysis.

opencc-zeroJan 2020View details →

IODP Expedition 361 Gas safety report

This composite report returns data from two different gas chromatograph configurations (GC3 and NGA). Each row combines data from several measurements made on the same sample at the same time for a particular headspace or vacutainer sample. If data do not exist for a particular expedition, the column does not appear. Gas samples were measured by gas chromatography and either flame ionization detection (GC-FID) or thermal conductivity detection (GC-TCD). Reported analytes may include methane, ethane, ethene, propane, propene, n-butane, i-butane, n-pentane, i-pentane, n-hexane, i-hexane, n-heptane, i-heptane, nitrogen, oxygen, carbon monoxide, carbon dioxide, and hydrogen sulfide. When data are available, methane to (ethane + ethene) ratio (C1/C2 ratio) is reported. To identify individual samples and tests, see each separate analysis (GC3, NGAFID, and/or NGATCD).

Figure 1 from: Hardy H, Knapp S, Allan EL, Berger F, Dixey K, Döme B, Gagnier P-Y, Frank J, Haston EM, Holstein J, Kiel S, Marschler M, Mergen P, Phillips S, Rabinovich R, Sanchez Chillón B, Sorensen MV, Thines M, Trekels M, Vogt R, Wilson S, Wiltschke-Schrotta K (2020) SYNTHESYS+ Virtual Access - Report on the Ideas Call (October to November 2019). Research Ideas and Outcomes 6: e50354. https://doi.org/10.3897/rio.6.e50354

Figure 1 Indicative proposal flow for SYNTHESYS+ Virtual Access proposals. Blue boxes indicated proposer(s) actions/responsibilities; violet boxes VA coordinator actions/responsibilities; green boxes indicate where communication and discussion between proposers and VA coordinators will be paramount; white (no fill) boxes indicate post-proposal actions. Double-ended arrows indicate where back-and-forth will occur between proposer(s) and VA coordinator(s).

opencc-zeroJan 2020View details →

IODP Expedition 361 Sample report

Report includes detailed information about samples taken for testing: location/depth, type/form factor, test, request number, and database identifier.

opencc-by-4.0Feb 2020View details →

MiRoR14 - P3 - Effect of an editorial intervention to improve the completeness of reporting of randomised trials: a randomised controlled trial

Protocol: <ul> <li>RCT Protocol Ammendment 2.pdf is the final version of the RCT protocol. </li> </ul> R scripts used: <ul> <li>Power RCT_bootstrap_paper.R was the code used for the power analysis. </li> <li>server.R and ui.R were part of the Shiny application used for the randomisation process.</li> <li>Primary Outcome analysis.R was the code used for the primary outcome analysis. </li> </ul> These files can be found below.

opencc-by-4.0Dec 2019View details →

OTUreporter: from amplicon to report in a single command

Full test dataset and output for OTUreporter amplicon pipeline. Contents: <ul> <li>full_dataset_out.tar: output of the OTUreporter analysis for the full test dataset. Most intermediate files from the mothur_out/ folder have been removed to reduce the size.</li> <li>full_sample_dataset.tar: includes the fastq.gz files from all samples and controls of the full test dataset. Generated by the UNSW MICR2011 course in 2019.</li> <li>sample_reports.tar.gz: final reports from the analysis of the full test dataset packaged separately for convenience.</li> </ul>

opencc-by-4.0Feb 2020View details →

Catalogues for 2019 zoonoses data reporting

The EFSA catalogues applied for the 2019 zoonoses data reporting are made available in Excel format for easier use and reference.

opencc-by-4.0Feb 2020View details →

Rift Valley Fever reported outbreaks from 2006 to January 2020

This is a movie map showing the Rift Valley Fever outbreaks in animals and humans reported by OIE and WHO respectively since 2006 until January 2020.

Supporting publication for 'Prevalence sample-based guidance for reporting 2019 data'

These two Excel documents help you to map terms from the matrix catalogue ZOO_CAT_MATRIX used in the aggregated prevalence data model to FoodEx2 codes and offer you examples on how prevalence data can be reported using SSD2

opencc-by-4.0Nov 2019View details →

Performance Monitoring Report of Cities

This Deliverable 2.1 Performance Monitoring Report of Cities describes the outcome of Task 2.1 of the URBAN-EU-CHINA Innovation Platform on Sustainable Urbanisation including: <ul> <li>Benchmarking and performance monitoring of matched cities by comparing existing monitoring systems and refining the initial indicator selection,</li> <li>A balanced key indicator set for all participating cities including an additional set with indicators for cities to expand their benchmarking, cooperation and monitoring capabilities for improved cooperation and more effective measures.</li> <li>Presentation of the evaluation results of all participating cities based on the urban development indicator framework devised jointly by the China Intelligent Urbanisation Collaboration Co-creation Centre for High Density Region (CIUC-Tongji Univ.) and the Austrian Institute of Technology (AIT),</li> <li>Analysis of the monitoring results of partner cities,</li> <li>Analysis of typical city partnership patterns. </li> </ul> The results can be used for benchmarking city performance targets, and they offer an approach to determine some typical and common criteria to select matching cities. Even if no statistical significance can be attached to the findings due to the small sample size, the findings of this report have nevertheless the potential to facilitate assessment of city development and collaboration for future cooperations between EU and Chinese cities, and to improve and achieve more effective collaboration through rational selections of partner cities.  The approach taken for the performance monitoring of cities is based on the analyses by quantitative and qualitative indicator sets covering the domains of Society, Economy, Infrastructure, and Environment which were defined during the project and are also based on previous work. The quantitative indicators are based on numerous data sources, such as <ul> <li>Oxford Economics Global Cities 2030</li> <li>OECD databases</li> <li>Eurostat databases</li> <li>Statistical Yearbooks of China</li> <li>Databases of national statistical bureaus (e.g., National Bureau of Statistics of China),</li> <li>Governmental reports (e.g., Statistical Communique of the People's Republic of China on National Economic and Social Development), </li> <li>private databases (e.g., Teleport<a>[1]</a>, Numbeo<a>[2]</a>), reports issued by relevant agencies (e.g., China Transportation Report by Baidu, Inc.), </li> <li>open spatial data sources (e.g., OpenStreetMap).</li> </ul> In addition to the quantitative and qualitative screening of European-Chinese city pairs based on statistical information, empirical information concerning the perception of the collaboration quality and key success factors has been gathered, screened and assessed.  The qualitative data was collected through surveys and interviews with European and Chinese city representatives.   As the first evaluation step, the Urban Development Indicator Set was constructed in order to monitor the key performance of all participating cities in the context of sustainable development. Secondly, data of partner cities were collected according to the Urban Development Indicator Set. In the third step, key performances of partner cities were monitored and compared based upon the collected data, and similarities and dissimilarities of partner cities were identified. Finally, the integrated quantitative qualitative data were used to identify typical patterns of city partnerships.     Eventually, suggestions are provided for collaboration domains and collaboration types that could provide a collaboration starting point for prospective city pairs.   <a>[1]</a> https://teleport.org/ <a>[2]</a> https://www.numbeo.com/cost-of-living/

FIG. 8. — Asterolepis alticristata n in Asterolepis alticristata n. sp. (Antiarchi) from the Upper Devonian (Frasnian) of Nunavut, Canada, and a report on the antiarch diversity of the Fram Formation

FIG. 8. — Asterolepis alticristata n. sp. outlines of midline crests of anterior median dorsal plates in left lateral view. Each crest is scaled to a common height and ordered according to actual height in order to highlight the shape variation. Each is depicted with the visceral surface as close to horizontal as possible. A, NUFV 1274; B, NUFV 834; C, NUFV 828; D, NUFV 850; E, NUFV 854; F, NUFV 886; G, NUFV 867; H, NUFV 877; I, NUFV 835; J, NUFV 889; K, NUFV 856; L, NUFV 872; M, NUFV 897 (holotype). Scale bars: 2 cm.

FIG. 4. — Asterolepis alticristata n in Asterolepis alticristata n. sp. (Antiarchi) from the Upper Devonian (Frasnian) of Nunavut, Canada, and a report on the antiarch diversity of the Fram Formation

FIG. 4. — Asterolepis alticristata n. sp., NUFV 898, posterior median dorsal plate in dermal (A), visceral (B), and cranial (C) views. Abbreviations: cv.AMD, area overlapping the anterior median dorsal plate; cv.Mxl, area overlapping the mixilateral plate; v.p, visceral pit. Scale bar: 2 cm.

FIG. 1. — A in Asterolepis alticristata n. sp. (Antiarchi) from the Upper Devonian (Frasnian) of Nunavut, Canada, and a report on the antiarch diversity of the Fram Formation

FIG. 1. — A, Map of Ellesmere Island; B, map of southwestern Ellesmere Island (rectangular inset of A) showing the locations of the field sites that have produced antiarch material; C, stratigraphy of the Okse Bay Group; D, stratigraphy of the Fram Formation type section.

FIG. 3. — Asterolepis alticristata n in Asterolepis alticristata n. sp. (Antiarchi) from the Upper Devonian (Frasnian) of Nunavut, Canada, and a report on the antiarch diversity of the Fram Formation

FIG. 3. — Asterolepis alticristata n. sp.: A-C, NUFV 1265, nuchal plate in dermal (A, photograph; A', labeled illustration), visceral (B, photograph; B', labeled illustration), and caudal (C) views; D-F, NUFV 813, premedian plate in dermal (D), visceral (E), and caudal (F) views; G-I, NUFV 812, premedian plate in dermal (G), visceral (H), and caudal (I) views. Abbreviations: cpl, central pit-line line groove; cv.L, area overlapping the lateral plate; cv.Pn, area overlapping the paranuchal plate; d.end, endolymphatic duct; ifc1, principal section of infraorbital pit-line groove; ml.p, midline process; mo.c, median occipital crista; nm, obtected area; pr.p, prerostral process; ps.f, parasagittal foramina; sop, supraoccipital pit; sot, supraotic thickening. Scale bar: 2 cm.

FIG. 9 in Asterolepis alticristata n. sp. (Antiarchi) from the Upper Devonian (Frasnian) of Nunavut, Canada, and a report on the antiarch diversity of the Fram Formation

FIG. 9. — Antiarchi material from Devonian deposits of Nunavut. A, Asterolepidoidei sp. indet. from NV0207, NUFV 1280, nuchal plate in dermal view; B, Asterolepis sp. indet. from NV0205, NUFV 1287, anterior median dorsal plate in dermal view; C, D, Bothriolepis sp. indet. from NV2K17, NUFV 847, anterior median dorsal plate in dermal (C) and visceral (D) views; E-J, Bothriolepididae sp. indet. from NV2K15, E, F, NUFV 1296, right lateral plate in dermal (E) and visceral (F) views; G, H, NUFV 1295, premedian plate in dermal (G) and visceral (H) views; I, J, NUFV 1302, nuchal plate in dermal (I) and visceral (J) views; K, L, Bothriolepididae sp. indet. from NV2K05, NUFV 1305, articulated partial cephalic skeleton in dermal (K, photograph; K', labeled illustration) and visceral (L, photograph; L', labeled illustration) views; M, N, Bothriolepidoidei sp. indet. from NV9913, NUFV 1308, premedian plate in dermal (M) and visceral (N) views; O-Q, Asterolepidoidei sp. indet. from NV9917, NUFV 1307, nuchal plate in dermal (O), visceral (P), and caudal (Q) views. Abbreviations: cpl, central pit-line groove; ifc1, principal section of infraorbital pit-line groove; L, lateral plate; Nu, nuchal plate; ood, otic-occipital depression; Pm, premedian plate; Pn, paranuchal plate; po.r, preorbital recess; Pp, postpineal plate. Scale bars: 1 cm.

FIG. 6 in Asterolepis alticristata n. sp. (Antiarchi) from the Upper Devonian (Frasnian) of Nunavut, Canada, and a report on the antiarch diversity of the Fram Formation

FIG. 6. — Asterolepis cf. radiata: A, B, NUFV 797, anterior median dorsal plate in dermal (A) and visceral (B, photograph; B', labeled illustration) views; C, D, NUFV 825, partial posterior median dorsal plate in dermal (C) and visceral (D, photograph; D', labeled illustration) views; E, NUFV 863, mixilateral in dermal view. Abbreviations: cd.ADL, area overlapped by the anterior dorsolateral plate; cd.AMD, area overlapped by the anterior median dorsal plate; cd.PMD, area overlapped by the posterior median dorsal plate; cv.ADL, area overlapping the anterior dorsolateral plate; cv.Mxl, area overlapping the mixilateral plate; lc, lateral corner; op.r, oblique posterolateral ridge; ps.d, parasagittal depressions; r.a, rough area; ta, tergal angle; v.p, visceral pit. Scale bar: 2 cm.

FIG. 5. — Asterolepis alticristata n in Asterolepis alticristata n. sp. (Antiarchi) from the Upper Devonian (Frasnian) of Nunavut, Canada, and a report on the antiarch diversity of the Fram Formation

FIG. 5. — Asterolepis alticristata n. sp.: A-C, NUFV 892, left side of articulated partial thoracic skeleton in visceral (A, photograph; A', labeled illustration), left lateral (B, photograph; B', labeled illustration), and cranial (C, photograph; C', labeled illustration) views; D, NUFV 895, right mixilateral plate in dermal view. Abbreviations: ADL, anterior dorsolateral plate; AVL, anterior ventrolateral; c1, central 1 plate; cd, area overlapped by ventral thoracic plates; cd.AMD, area overlapped by the anterior median dorsal plate; cr.d, crescent-shaped depression; cv.Mxl, area overlapping the mixilateral plate; dlr, dorsolateral ridge; f.ax, foramen axillaris; lcg, main lateral line groove; MV, median ventral plate; pr.b, processus brachialis; pr.o, processus obstans. Scale bar: 5 cm.

FIG. 7. — A-M in Asterolepis alticristata n. sp. (Antiarchi) from the Upper Devonian (Frasnian) of Nunavut, Canada, and a report on the antiarch diversity of the Fram Formation

FIG. 7. — A-M, Asterolepidoidei sp. indet. from NV2K17, A, B, NUFV 831, articulated partial cephalic skeleton in dermal (A, photograph; A', labeled illustration) and visceral (B, photograph; B', labeled illustration) views; C, D, NUFV 857, premedian plate in dermal (C) and visceral (D) views; E, F, NUFV 1267, premedian plate in dermal (E) and visceral (F) views; G-I, NUFV 880, nuchal plate in dermal (G), visceral (H), and caudal (I) views; J-L, NUFV 1252, nuchal plate in dermal (J), visceral (K), and caudal (L) views; M, NUFV 808, lateral plate in dermal view; N, cf. Asterolepis sp. indet. from NV2K17, NUFV 852, mixilateral plate in dermal view. Abbreviations: cpl, central pit-line line groove; ifc1, principal section of infraorbital pit-line groove; L, lateral plate; nm, obtected area; Nu, nuchal plate; Pn, paranuchal plate; Pp, postpineal plate. Scale bar: 2 cm.