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opencc-by-4.0Feb 2020View details →

Type IIP Supernova Progenitors and Their Explodability. I. Convective Overshoot, Blue Loops, and Surface Composition

MESA input and output files associated with the published work. We used MESA version r-10398 and MESA SDK version 20180822. The MESA_inputs.tar.gz contains work directories for each overshoot parameter (f) values analyzed in the paper. The models can be run directly from each working directory by making (./mk) and then running MESA (./rn). The modified run-script (rn) starts a MESA run from pre-main-sequence stage if the LOGS directory is absent, otherwise restarts from the latest photo saved in the photos directory. Each working directory has modified run_star_extras.f file that saves compactness parameters, mu_4, M_4 as extra history columns, as well as implements additional temporal resolution constraints as explained in our paper II (Wagle & Ray 2019, DOI:10.3847/1538-4357/ab5d2c, section 2.2). The f_*.tar.gz contains a history.data file (and corresponding binary file history.npy that can be directly loaded into python data structure), as well as several profile.data files and a saved model at CC stage for each 'f' value. It also contains png_plots generated by inlist_pgstar and the movies generated from these files using "images_to_movie.sh" script (available with MESA SDK).

FIGURES 29–30 in Type material of Arctiinae (Lepidoptera: Erebidae) in the collection of the Museo Argentino de Ciencias Naturales Bernardino Rivadavia (Buenos Aires Argentina)

FIGURES 29–30. Dorsal and ventral view of type specimens with its respective labels. 29, male paratype of Cisthene boliviana Forster, 1942. 30, male holotype of Vianania aymara Orfila, 1954.

FIGURES 25–28 in Type material of Arctiinae (Lepidoptera: Erebidae) in the collection of the Museo Argentino de Ciencias Naturales Bernardino Rivadavia (Buenos Aires Argentina)

FIGURES 25–28. Dorsal and ventral view of type specimens with its respective labels. 25, male holotype of Mesolasia splendens Jörgensen, 1935. 26, male paratype of Phoenicoprocta schreiteri Jörgensen, 1935. 27, possible male syntype of Hypocrita calochroma Snellen, 1878. 28, male holotype of Cisthene australis Orfila, 1935.

FIGURES 9–12 in Type material of Arctiinae (Lepidoptera: Erebidae) in the collection of the Museo Argentino de Ciencias Naturales Bernardino Rivadavia (Buenos Aires Argentina)

FIGURES 9–12. Dorsal and ventral view of type specimens with its respective labels. 9, male lectotype of Charidea rubricincta Burmeister, 1878. 10, male lectotype of Eurata frigida Burmeister, 1878. 11, male lectotype of Eurata hermione Burmeister, 1878. 12, male holotype of Eurata igniventris Burmeister, 1878.

FIGURES 17–20 in Type material of Arctiinae (Lepidoptera: Erebidae) in the collection of the Museo Argentino de Ciencias Naturales Bernardino Rivadavia (Buenos Aires Argentina)

FIGURES 17–20. Dorsal and ventral view of type specimens with its respective labels. 17, male lectotype of Glaucopis leucostalacta Burmeister, 1880. 18, female holotype of Psoloptera meisteri Berg, 1883. 19, male holotype of Eurota (sic) julia Orfila, 1931a syn n. 20, male holotype of Eurota (sic) strigiventris famatina Orfila, 1931b.

FIGURES 5–8 in Type material of Arctiinae (Lepidoptera: Erebidae) in the collection of the Museo Argentino de Ciencias Naturales Bernardino Rivadavia (Buenos Aires Argentina)

FIGURES 5–8. Dorsal and ventral view of type specimens with its respective labels. 5, female paratype of Premolis eugenia Jörgensen, 1935. 6, female holotype of Lepidojulia arnaui Orfila, 1952. 7, male holotype of Amastus ninae Orfila, 1959. 8, female holotype of Pericopis regalis Jörgensen, 1935.

FIGURES 76–81. Pezothrips pelikani, n in Two new species of Pezothrips (Thysanoptera, Thripidae) in Japan and Europe, with designation of lectotype of type species

FIGURES 76–81. Pezothrips pelikani, n. sp., lectotype female. (76) Head and pronotum; (77) Antenna; (78) Meso- and metanota; (79) Tergite II; (80) Tergites VII–X; (81) Sternite VII (sculpture omitted).

FIGURES 38–46 in Two new species of Pezothrips (Thysanoptera, Thripidae) in Japan and Europe, with designation of lectotype of type species

FIGURES 38–46. Pezothrips frontalis in SMF, female microptera, 38–43. (38) Head and pronotum; (39) Antenna; (40) Meso- and metanota; (41) Tergite II; (42) Tergites VII–X; (43) Sternite VII (sculpture omitted). (44) Metascutum, female macroptera, sculpture omitted. Male, 45–46. (45) Tergite IX; (46) Sternite VI (sculpture omitted).

FIGURES 1–17. Pezothrips species. P. bactrianus, 1–3 in Two new species of Pezothrips (Thysanoptera, Thripidae) in Japan and Europe, with designation of lectotype of type species

FIGURES 1–17. Pezothrips species. P. bactrianus, 1–3. (1) Paratype, female; (2) Allotype, male; (3) Male from Turkey. (4) P. cereus, paratype female. P. dianthi, 5–6. (5) Female; (6) Male. (7) P. frontalis, 7–9. (7) Lectotype female; (8) Female macroptera; (9) Male microptera. (10) P. kaszabi, holotype female. (11) P. moravicus, holotype female. P. nadeshiko, n. sp., 12–14. (12) Holotype female; (13) Paratype female; (14) Paratype male. (15) P. nigriventris, holotype female. P. pelikani, n. sp., 16–17. (16) Lectotype female; (17) Slide of lectotype, red arrow indicates lectotype.

opennotspecifiedMar 2019View details →

FIGURE 4 in A catalogue of Eudóxia M. Froehlich's collection of planarians (Platyhelminthes) with emphasis on type specimens on histological slides

FIGURE 4. Picture of a detail of a drawer showing five histological glass slides of Froehlich's collection. Note labels partially eaten by insects.

openbsd-2-clause-netbsdFeb 2020View details →

A zero to four parameter instationary thermal-block-type benchmark model for parametric model order reduction

We specify a new benchmark for parametric model order reduction that is scalable both in degrees of freedom as well as parameter dimension.

opencc-by-4.0Mar 2020View details →

German Traffic Sign Detection Benchmark - 3 different types of backdoor patterns added

Datasets are split in Training and Test datasets GTSRB_backdoor_green_1.zip - a green squared pattern sized 1% of the images area is added randomly around the center in an interval of +/-20% of time images width and height GTSRB_backdoor_green_0_5.zip - a green squared pattern sized 0.5% of the images area is added randomly around the center in an interval of +/-20% of time images width and height GTSRB_backdoor_black_1.zip - a black squared pattern sized 1% of the images area is added randomly around the center in an interval of +/-20% of time images width and height

opencc-by-4.0Aug 2019View details →

Learning Lenient Parsing & Typing via Indirect Supervision

Validation Set: We have shared 3 CSV files containing human-annotated validation sets of our paper (Validation Data.zip). AST and Student Code Correction:  For generating AST and code correction, please check the two files, AST.py and Top1.py ( in AST & Top-1.zip ). In AST.py, we present the output of different parts of the program with an example. Please read that one before Top1.py. We follow the implementation of<a href="https://github.com/Lsdefine/attention-is-all-you-need-keras?fbclid=IwAR2UCy9NvD_PLHFVqM6B1VqvMVZzWRIS25BTG4nJudEhs3684RSOpGBhOyk"> https://github.com/Lsdefine/attention-is-all-you-need-keras</a>. Please check the remaining code in the above link. We made a minor correction in the dataloader.py to use two separate vocabulary cutoffs for input and output. dataloader1.py, transformer1.py, etc. are an exact replication of dataloader.py and transformer.py. Since we are using two models, we did it that way to avoid any conflict. TypeFix: Check the code in TypeFix.zip. We have also published data set for FragFix and BlockFix.

opencc-by-4.0Mar 2020View details →

Data_text section 3.1_Enzymatic interconversion of the oxysterols 7β,25 dihydroxycholesterol and 7-keto,25-hydroxycholesterol by 11β-hydroxysteroid dehydrogenase type 1 and 2

Data from kinetic characterization (Km and vmaxapp) described in text section 3.1 of Enzymatic interconversion of the oxysterols 7β,25 dihydroxycholesterol and 7-keto,25-hydroxycholesterol by 11β-hydroxysteroid dehydrogenase type 1 and 2 Dataset (doi:<a href="https://doi.org/10.1016/j.jsbmb.2019.03.011">10.1016/j.jsbmb.2019.03.011</a>) contains values from kinetic characterization (31003A-179400_date_name_25Oxysterol_4_9_M_1) described in text section 3.1 corresponding to raw data obtained from LC-MS/MS analysis provided as three files in CSV format (31003A-179400_date_name_25Oxysterol_4_9_1-3). All further experiment related information and subsequent data analysis provided as two meta-data-files: (31003A-179400_date_name_25Oxysterol_4_9_M_1) as TXT format.

Data_supplemental figure 2_Enzymatic interconversion of the oxysterols 7β,25 dihydroxycholesterol and 7-keto,25-hydroxycholesterol by 11β-hydroxysteroid dehydrogenase type 1 and 2

Data of supplemental figure 2 from Enzymatic interconversion of the oxysterols 7β,25 dihydroxycholesterol and 7-keto,25-hydroxycholesterol by 11β-hydroxysteroid dehydrogenase type 1 and 2 Dataset (doi:<a href="https://doi.org/10.1016/j.jsbmb.2019.03.011">10.1016/j.jsbmb.2019.03.011</a>) contains the original figure as PNG format (<a href="https://doi.org/10.1016/j.jsbmb.2019.03.011">10.1016/j.jsbmb.2019.03.011</a>_Fig. S2). Data obtained from LC-MS/MS measurements subsequent data analysis (31003A-179400_date_name_25Oxysterol_4_8_1-3) provided as three CSV file and meta-data-files (31003A-179400_date_name_25Oxysterol_4_8_M_1-2) as TXT and PDF format.

Data_Figure 7_Enzymatic interconversion of the oxysterols 7β,25 dihydroxycholesterol and 7-keto,25-hydroxycholesterol by 11β-hydroxysteroid dehydrogenase type 1 and 2

Data of figure 7 from Enzymatic interconversion of the oxysterols 7β,25 dihydroxycholesterol and 7-keto,25-hydroxycholesterol by 11β-hydroxysteroid dehydrogenase type 1 and 2 Dataset (doi:<a href="https://doi.org/10.1016/j.jsbmb.2019.03.011">10.1016/j.jsbmb.2019.03.011</a>) contains the original figure as PNG format (<a href="https://doi.org/10.1016/j.jsbmb.2019.03.011">10.1016/j.jsbmb.2019.03.011</a>_Fig. 7). Corresponding raw data obtained from docking calculation analysis and calculation provided as two files in TXT format (31003A-179400_date_name_ 25Oxysterol_19_dataset_1). All further experiment related information and subsequent data analysis provided as two meta-data-files (31003A-179400_date_name_25Oxysterol_19_dataset_M) as TXT format.

Data_supplemental table 1_Enzymatic interconversion of the oxysterols 7β,25 dihydroxycholesterol and 7-keto,25-hydroxycholesterol by 11β-hydroxysteroid dehydrogenase type 1 and 2

Data of supplemental table 1 from Enzymatic interconversion of the oxysterols 7β,25 dihydroxycholesterol and 7-keto,25-hydroxycholesterol by 11β-hydroxysteroid dehydrogenase type 1 and 2 Dataset (doi:<a href="https://doi.org/10.1016/j.jsbmb.2019.03.011">10.1016/j.jsbmb.2019.03.011</a>) contains the original table as PNG format. Corresponding data for RT-PCR analysis provided as two meta-data-files (31003A-179400_date_name_25Oxysterol_3_1_M_1-2) as TXT and PDF format.

Data_Figure 3_Enzymatic interconversion of the oxysterols 7β,25 dihydroxycholesterol and 7-keto,25-hydroxycholesterol by 11β-hydroxysteroid dehydrogenase type 1 and 2

Data of figure 3 from Enzymatic interconversion of the oxysterols 7β,25 dihydroxycholesterol and 7-keto,25-hydroxycholesterol by 11β-hydroxysteroid dehydrogenase type 1 and 2 Dataset (doi:<a href="https://doi.org/10.1016/j.jsbmb.2019.03.011">10.1016/j.jsbmb.2019.03.011</a>) contains the original figure and text passage 3.3 as two files as PNG format (<a href="https://doi.org/10.1016/j.jsbmb.2019.03.011">10.1016/j.jsbmb.2019.03.011</a>_Fig. 3). Corresponding raw data obtained from LC-MS/MS analysis provided as six files in CSV format (31003A-179400_Date_Name_25Oxysterol_4_Dataset_1-3). All further experiment related information and subsequent data analysis provided as four meta-data-files (31003A-179400_ Date_Name_25Oxysterol_4_Dataset_M_1-2) as TXT format and PDF format.

Data_supplemental figure 3_Enzymatic interconversion of the oxysterols 7β,25 dihydroxycholesterol and 7-keto,25-hydroxycholesterol by 11β-hydroxysteroid dehydrogenase type 1 and 2

Data of supplemental figure 3 from Enzymatic interconversion of the oxysterols 7β,25 dihydroxycholesterol and 7-keto,25-hydroxycholesterol by 11β-hydroxysteroid dehydrogenase type 1 and 2 Dataset (doi:<a href="https://doi.org/10.1016/j.jsbmb.2019.03.011">10.1016/j.jsbmb.2019.03.011</a>) contains the original figure as PNG format (<a href="https://doi.org/10.1016/j.jsbmb.2019.03.011">10.1016/j.jsbmb.2019.03.011</a>_FigS3). Corresponding raw data obtained from liquid scintillation analysis provided as three files in CSV format (31003A-179400_date_name_27Oxysterol_11_7_1-3). All further experiment related information and subsequent data analysis provided as meta-data-file (31003A-179400_date_name_25Oxysterol_11_7_M) as TXT format.

Data_Figure 5_Enzymatic interconversion of the oxysterols 7β,25 dihydroxycholesterol and 7-keto,25-hydroxycholesterol by 11β-hydroxysteroid dehydrogenase type 1 and 2

Data of figure 5 from Enzymatic interconversion of the oxysterols 7β,25 dihydroxycholesterol and 7-keto,25-hydroxycholesterol by 11β-hydroxysteroid dehydrogenase type 1 and 2 Dataset ((doi:<a href="https://doi.org/10.1016/j.jsbmb.2019.03.011">10.1016/j.jsbmb.2019.03.011</a>) contains the original figure as PNG format (<a href="https://doi.org/10.1016/j.jsbmb.2019.03.011">10.1016/j.jsbmb.2019.03.011</a>_Fig. 5). Corresponding raw data obtained from liquid scintillation analysis provided as six files in CSV format (31003A-179400_date_KB_25Oxysterol_11_dataset_1-4). All further experiment related information and subsequent data analysis provided as two meta-data-file: (31003A-179400_date_name_27Oxysterol_11_dataset_M_1,) as TXT format.