Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
4,753
datasets available to search
ShareScore release 0.9.0
Dataset results
4,753 results for “SHAPE”
Ehmt2 Inactivation in Pancreatic Epithelial Cells Shapes the Transcriptional Landscape and Inflammation Response of the Whole Pancreas [RNA-seq]
GEO Series GSE269251. Mus musculus. 22 samples. Type: Expression profiling by high throughput sequencing.
Epigenetic silencing of Th1 chemokines shapes tumor immunity, immunotherapy and patient outcome [shEZH2]
GEO Series GSE71870. Homo sapiens. 4 samples. Type: Expression profiling by array.
An alternative transcriptome shapes cell fate transitions in yeast (TES-seq)
GEO Series GSE137708. Saccharomyces cerevisiae. 81 samples. Type: Expression profiling by high throughput sequencing.
A temperature-responsive network links cell shape and virulence traits in a primary fungal pathogen -- RNAi mutants (1)
GEO Series GSE46938. Histoplasma capsulatum. 36 samples. Type: Expression profiling by array.
Characterisation of the regulatory landscape in Crohn’s disease reveals miRNA-associated alterations that shape anti-TNF response
GEO Series GSE270663. Homo sapiens. 238 samples. Type: Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing.
Spermidine restricts neonatal inflammation via metabolic shaping of PMN-MDSCs [CUT&Tag]
GEO Series GSE287179. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Enhancer invasion shapes MYCN dependent transcriptional amplification in neuroblastoma [ARRAY]
GEO Series GSE80149. Homo sapiens. 15 samples. Type: Expression profiling by array.
Epigenetic silencing of Th1 chemokines shapes tumor immunity, immunotherapy and patient outcome
GEO Series GSE71871. Homo sapiens. 8 samples. Type: Expression profiling by array.
ARID1A loss shapes immunosuppression tumor microenvironment via NF-kB induced MDSC chemotaxis to promote prostate Cancer metastasis [ATAC-seq]
GEO Series GSE197687. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
The pluripotent genome in three dimensions is shaped around pluripotency factors
GEO Series GSE37275. Mus musculus. 50 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Enhancer invasion shapes MYCN dependent transcriptional amplification in neuroblastoma [ATAC-seq]
GEO Series GSE80152. Homo sapiens. 5 samples. Type: Other.
Tcf1-CTCF cooperativity shapes genomic architecture to promote CD8+ T cell homeostasis [Hi-C]
GEO Series GSE179773. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
The lncRNA RUS shapes gene expression program towards neurogenesis [ChIRP-seq]
GEO Series GSE196527. Mus musculus. 9 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Cell environment shapes TDP-43 function: implications in neuronal and muscle disease
GEO Series GSE171714. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
Transcription and splicing regulation by NLRC5 shape the interferon response in human pancreatic β-cells [iPSC scRNAseq]
GEO Series GSE203384. Homo sapiens. 10 samples. Type: Expression profiling by high throughput sequencing.
Transcription and splicing regulation by NLRC5 shape the interferon response in human pancreatic β-cells
GEO Series GSE203385. Homo sapiens. 68 samples. Type: Expression profiling by high throughput sequencing.
Tissue-resident macrophage enhancer landscapes are shaped by the local microenvironment
GEO Series GSE63341. Mus musculus. 106 samples. Type: Other; Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Enzyme promiscuity shapes evolutionary innovation and optimization
GEO Series GSE114358. Escherichia coli str. K-12 substr. MG1655. 22 samples. Type: Expression profiling by high throughput sequencing.
Diverse Non-Genetic Allele Specific Expression Effects Shape Genetic Architecture at the Cellular Level in the Mammalian Brain
GEO Series GSE93788. Macaca fascicularis; Mus musculus. 71 samples. Type: Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing.
Temporal constraints on enhancer usage and enhancer-promoter connectivity shape the regulation of limb gene transcription [ChIP-seq]
GEO Series GSE262005. Mus musculus. 22 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.