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opennotspecifiedNov 2022View details →

FIGURE 5 in Morphology of developing larvae and a dichotomous key for five bubble-nesting Betta species (Teleostei: Osphronemidae)

FIGURE 5. Morphological and pigmentation features of immature stages of Betta mahachaiensis (KUMF 7067). (a) Newly hatched larva (NL = 2.58 mm); (b) day 1 yolk sac larva (NL = 2.70 mm); (c) day 3 pre-flexion larva (NL = 2.78 mm); (d) day 9 pre-flexion larva (NL = 3.20 mm); (e) day 15 flexion larva (NL = 3.22 mm); (f) day 18 post-flexion larva (SL = 3.82 mm); (g) day 31 post-flexion larva (SL = 6.24 mm); (h) day 40 juvenile (SL = 7.57 mm).

opennotspecifiedNov 2022View details →

FIGURE 7 in Morphology of developing larvae and a dichotomous key for five bubble-nesting Betta species (Teleostei: Osphronemidae)

FIGURE 7. Morphological and pigmentation features of immature stages of Betta smaragdina (KUMF 7069); (a) Newly hatched larva (NL = 2.47 mm); (b) day 1 yolk sac larva (NL = 2.79 mm); (c) day 3 pre-flexion larva (NL = 3.24 mm); (d) day 7 pre-flexion larva (NL = 4.06 mm); (e) day 9 flexion larva (NL = 4.9 mm); (f) day 15 post-flexion larva (SL = 6.50 mm); (g) day 23 post-flexion larva (SL = 7.72 mm); (h) day 40 juvenile (SL = 10.40 mm).

opencc-zeroDec 2022View details →

Histological stacks for: Vestigial structures and variation in the evolution of the marsupial mammal dental development: A study of the Woolly Opossum Caluromys philander

The pattern of dental replacement in marsupial mammals has received much attention for its derived nature and potential relationship to the life history of the group. However, few species have been studied thoroughly and little is known about the embryonic structures and their use in addressing issues of homology and dental evolution in general. We studied a developmental series of ten individuals of pouch young Caluromys philander to thoroughly document dental development with histological sections and 3D models of dental series. This dataset contains the raw TIFF stacks for the above histological sections. These may be used for direct histological analysis, or to generate 3D-reconstructions using software such as Fiji and TrakEM2.

opencc-by-4.0Dec 2022View details →

Negative leader side of lightning development

The video captures an invisible positive leader, only blurred recoil leaders are visible. From T=+0.07 s (1:26) a negative side of the leader is visible. Negative leader branches abundantly, its propagation is faster than the positive leader and contains hot luminous ends. The second visible negative leader starts at T=+0.25 s (1:41). The negative leaders do not generate recoil leaders.

opencc-by-4.0Dec 2021View details →

Positive leader side of lightning development and recoil leaders

This video captures (from T=+0.27 s (1:02) to T=+0.40 s (1:12)) a positive side of the lightning leader. When the current flowing through the leader begins to weaken, recoil leaders start to appear at its end (T=+0.38 s (1:10)).

opencc-by-4.0Dec 2022View details →

Extraction Forms about Challenges and Problems of Software Processes in the Context of Global Software Development: A Systematic Mapping Study

Extraction Forms of the Systematic Mapping Study about Challenges and Problems of Software Processes in the Context of Global Software Development. 50 papers were analized.

opencc-by-4.0Nov 2022View details →

Raw data for: Cell-free biosynthesis combined with deep learning accelerates de novo-development of antimicrobial peptides

This repository contains data related to "Cell-free biosynthesis combined with deep learning accelerates de novo-development of antimicrobial peptides" by Pandi et al. Included are molecular dynamics parameter files, initial structures after system equilibration and production trajectories. For simulations of AMPs with membranes, trajectories are subsampled with 1 frame every 5 ns and final structures after 1 μs of production simulation are included. Contact information: Name: Stefan L. Schaefer Institution: Department of Theoretical Biophysics, Max Planck Institute of Biophysics Address: Max-von-Laue-Str. 3, 60438 Frankfurt am Main, Germany Email: stefan.schaefer@biophys.mpg.de

opencc-zeroJan 2023View details →

Development and validation of an eDNA protocol for monitoring endemic Asian Spiny Frogs in the Himalayan region of Pakistan

Wildlife monitoring programs are instrumental for the assessment of species, habitat status, and for the management of factors affecting them. This is particularly important for species found in freshwater ecosystems, such as amphibians, as they have higher estimated extinction rates than terrestrial species. We developed and validated two species-specific environmental DNA (eDNA) protocols and applied them in the field to detect the Hazara Torrent Frog (Allopaa hazarensis) and Murree Hills Frog (Nanorana vicina). Additionally, we compared eDNA surveys with visual encounter surveys and estimated site occupancy. eDNA surveys resulted in higher occurrence probabilities for both A. hazarensis and N. vicina than for visual encounter surveys. Detection probability using eDNA was greater for both species, particularly for A. hazarensis. The top-ranked detection model for visual encounter surveys included effects of both year and temperature on both species, and the top-ranked occupancy model included effects of elevation and year. The top-ranked detection model for eDNA data was the null model, and the top-ranked occupancy model included effects of elevation, year, and wetland type. To our knowledge, this is the first time an eDNA survey has been used to monitor amphibian species in the Himalayan region.

Somitic mesoderm morphogenesis is necessary for neural tube closure during Xenopus development

Data generated during the implementation of the MSCA infividual fellowship project 101038073.

opencc-zeroJan 2023View details →

Larval development and poor food availability: Local adaptations and plasticity in a widespread amphibian species

Data of fire salamander larvae reared under rich and poor food conditions. Data include also length, growth rate and number of prey attacked by the same larvae for 30 days after metamorphosis. In this study, we considered two extrinsic factors such as food availability and altitude and we examined their effects on larval growth, timing of metamorphosis and survival in fire salamander larvae. We also investigated whether larval diet has repercussions on growth rate of juvenile salamanders in the month following metamorphosis. Our experimental study was conducted on 150 newborn fire salamander larvae from 15 epigean sites at different altitudes (ranging between 250 and 1491 m a.s.l.). The larvae of each site were divided into two treatment groups: "poor" and "rich" food conditions.

Table S1. Clinical failure rates in drug development: data sources.

Supplementary table comprising the data sources used in the manuscript “No Improvement in 60 Years: Drug Failure Rates from the 1960s to the 2010s”.

(11)-Strobl2023A-DS0001--0010 – Ten Tribolium castaneum long-term live imaging datasets of embryonic development acquired with light sheet fluorescence microscopy

(11)-Strobl2023A-DS0001--0010 – Ten Tribolium castaneum long-term live imaging datasets of embryonic development acquired with light sheet fluorescence microscopy

Supplemental materials for: Current pubertal development in Chinese children and the impact of overnutrition, lifestyle and perinatal factors

Context: Pubertal onset has been decreasing in many countries but there has been no data on pubertal development in Chinese children over the last decade. Objective: The primary objective of the study was to evaluate the current status of sexual maturation in Chinese children and adolescents. Secondary objectives were to examine socio-economic, lifestyle and auxological associations with pubertal onset. Design: A national, cross-sectional health survey. Setting: The community-based setting. Participants: A multistage, stratified cluster random sampling method was used to select a nationally representative sample, consisting of 231,575 children and adolescents(123,232 boys and 108,343 girls) between 2017 and 2019. Main Outcome Measure: Growth parameters and pubertal staging were assessed by physical examination. Results: Compared to 10 years previously the median age of Tanner 2 breast development and menarche were similar at 9.65 years and 12.39 years respectively. However, male puberty occurred earlier with a median age of testicular volume ≥4 ml of 10.65 years. Pubertal onset did occur earlier at the extremes with 3.3% of the girls with breast development between 6.5-6.99 years old increasing to 5.8% by 7.5-7.99 years old. Early pubertal onset was also noted in boys, with a testicular volume ≥ 4 ml noted in 1.5% between 7.5-7.99 years increasing to 3.5% between 8.5-8.99 years old. Obesity and overweight increased the risk of developing earlier puberty compared to the normal weight in both boys and girls. Conclusions: Over the past decade, pubertal development is occurring earlier in Chinese children. While the cause is multifactorial, overweight and obesity are associated with earlier puberty onset. The currently-used normative pubertal data of precocious puberty may not be applicable to diagnose precocious puberty.

E-cadherin in developing murine T cells controls spindle alignment and progression through β-selection

Timelapse images of DN3a cells from E-cadherinflox/flox mice transfected with GFP (E-cad+) or GFP-cre (E-cad-) and cherry-ap2a2   Extracted time points from additional movies which included dividing DN3a cells and analysed for asymmetric distribution of cherry-ap2a2 (alpha-adaptin)

E-cadherin in developing murine T cells controls spindle alignment and progression through β-selection

Confocal images of fixed DN3a cells  Timelapse images of DN3a cells from E-cadherinflox/flox mice transfected with GFP (E-cad+) or GFP-cre (E-cad-) and cherry-tubulin

opencc-by-4.0Feb 2023View details →

tweets from Twitter developer API

Dataset used in several JsonPath engines.

opencc-by-4.0Aug 2021View details →

KI Process Model Developed for SIAM Project

Process Model Diagram for KI Development Process improved with practices from SCRUM, XP, Design Thinking, and UX Methods by using the Method Engineering Tools Developed in the SIAM Project.  Updated with the source XMI file for Ki Process Specification (KiProcess.mprocesos) and the corresponding ecore metamodel (mprocesos.ecore)   *The names of the elements in the process are in Spanish.

opencc-by-4.0Feb 2023View details →

Open source and open hardware: developing tools that are accessible and customisable

The following video describes how ROMI uses open source hardware to support communities through customisation and adaptation. Funded by EU Grant 773875. Videos are available in: <ul> <li>Hi-res (1080p Apple ProRes)</li> <li>Mid-res (1080p H265)</li> </ul> Video script: (MINCHIN) A key aspect and component of the ROMI project is that it should be open source so there is no proprietary software there's no ownership over the designs in fact it's created to be hacked customised and adapted to any farm. (HANAPPE) One of the aspects of the ROMI project is open hardware and we started from scratch like buying a motor buying a motor-controller programming the motor controller and which is maybe different than many of the projects you might see more industrial projects who might rely more on say high-end standard components from from the industry but i think there's a real advantage in trying to build everything up is that first you understand everything you can explain everything you can fix anything you can you know document anything for you know DIY farmers that they you know if they want to replace one motor with another and understanding that all allows you to quickly experiment stuff without having to depend on someone else who's working with say a closed source component and it allows you to be quite reactive and of course in the end allows you to be fairly cost effective. (BAORI) One of the things we set out to do with this project was to make it accessible and the idea is that at the end of the project everything will be open source so from the frame to the software the designs the cad everything will be open source so if you're a maker if you're somebody who is an engineer and wants to build one of these robots yourself you'll be able to download everything including the software to be able to make it run and because we wanted it to be accessible we started out with one thought that was everything that we put into this rover should also be accessible. (CAMPRODON) So we are trying to bring that philosophy that is embedded within Fab Labs slash (/) maker movement at large the open hardware movement, of how you design for distributed manufacturing. Which means that you take design decisions on the way that you build things which are meant for others replicated in new laboratories using new machines and you do that on top of a network such as a Fab Lab network which is a robust yet heterogeneous. (BARBERAN) It seems like someone tinkered with it. The idea when we design this is to constrain ourselves to do it in a way that anyone else can build it easily. So we try to keep the type and the complexity of the tools we use as small and simple as we can, so we use 3d printers that today are really accessible, we use CNC machines that's maybe the the most complex machine we use but it was it was needed because we need to build something that can stand the weather in a harsh environment in a farm. So we use aluminium and plastic and the rest of the components are mostly commercial components so the the process of designing it is a common go between the computer and the farm and the fab lab we tried here with the cable on the office to hang the first versions of the of the cable bot then we come back to redesign the pieces and then we adjust the sizes of the pulleys and the springs and then we do another model. And so this ability to reiterate so fast is also provided by the simplicity of the tools we use. Using a really simple 3d printer to build a robot is allows you to do in one month several versions and iterations of the same robot. (HANAPPE) In the end our goal is sustainability it's not technology, and what is the best way for whatever we build to have an impact on on say farmers in Europe or wider, and if if what we do is good then we would like them to have access to these tools, and there's some sort of a confidence that then there will be some financing flowing back to us. (MINCHIN) When we open source this knowledge and these tools it allows for an abundance of researchers of practitioners to come together to find the solutions, we don't have to depend on a small development team so the the library of tools that are developed are really a public library for others to to use and to adapt. (BARBERAN) At the end I think the the most important part that we don't even realise because we just do it because we are on the on the inertia of doing it is that we are setting rocks for the future. At the end we are not making right now the the the best robot the best tool what we are doing is setting ground to build on the future the best robot and the best thing built by people not by us because we don't we are not farmers we are not going to design the best robot and we are not a big company with resources as crazy to to make the ultra high-tech thing. But we are able to do something to share with people and a lot of heads think better than a couple of heads you know. The the model that that linux a lot of people in the linux community use is we are dumber than them but we are hundreds of thousands. Hundreds of thousands of heads think better than 10 heads so being able to share that knowledge and to include people in in the development of their own tools i think is the best part on a mid and long term way of seeing this.

opencc-zeroFeb 2023View details →

Effect of temperature on the post-diapause development rate, survival, and body mass of the solitary wasp Isodontia elegans

We examined the relationship of post-diapause rearing temperature to developmental rate, survival, and adult body mass of the solitary wasp Isodontia elegans using prepupae from trap-nests. Isodontia elegans is a member of a genus often found in trap-nests in North America and Europe. Trap-nests are commonly used tools for studying cavity-nesting solitary wasps and bees. In temperate zones, progeny in nests usually overwinter as fully prepupae before pupating and emerging as adults. An important aspect of properly using trap-nests is determining temperatures that affect survival and health of developing offspring. After overwintering >600 cocoons containing prepupae after the summers of 2015 and 2016, we placed cocoons on a laboratory thermal gradient where offspring experienced one of 19 constant temperatures from 643°C; emergence of adults was monitored for 100 days. Our conservative estimate for the critical thermal minimum for development is 14°C, whereas that for the critical maximum is ~33°C. Prepupae transitioned to adults most rapidly at 29–33°C, but developmental rate was lower for some progeny exposed to temperatures ≥30°C. Offspring successfully reached the adult stage in <100 days at of temperatures of ~19–33°C. Adults from cocoons reared at lower temperatures weighed on average 6-10% more than expected based on their head widths, whereas those reared at higher temperatures weighed 4–10% less than expected. The difference may be due to greater rates of water loss and lipid metabolism during development at higher temperatures. Pre-overwintering cocoon mass was a significant predictor of relative adult body mass, indicating that adult health is partly related to their condition before overwintering. The trends we observed were similar to those for the bee Megachile rotundata, which we previously studied on the same gradient apparatus. However, data are needed on many other species of wasps and bees from a diversity of environments.