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Fig. 5 in Isolation and identification of 18 unrecorded prokaryotic species from the intestinal tracts of aquatic animals in Korea
Fig. 5. The phylogenetic tree based on 16S rRNA gene sequence showing the phylogenetic relatedness between the three isolated strains belonging to the phylum Firmicutes and the type species from each genus. The tree was mainly reconstructed using the NJ, ML, and MP algorithms. The filled diamonds indicate the branches present in the phylogenetic trees reconstructed using three different tree reconstruction methods. Numbers on the nodes represent bootstrap values with 1000 replicates(NJ/ML/MP). E. coli ATCC 11775T was used as an outgroup. The bar indicates 0.05 accumulated substitutions per nucleotide.
An axisymmetric impinging jet under two-frequency external forcing: animations of low-order reconstruction from DMD modes of PIV data
<p>Animations of the low-order reconstruction of vortex structures dynamics in an impinging turbulent jet under external periodic forcing. The reconstruction is obtained from DMD modes of time-resolved PIV data. The flow cases correspond to the unmodulated (main case) and modulated amplitude of the forcing frequency. The modulation frequencies are set to as 1/2, 1/3, 1/4, 1/5 and 1/8 of the main one, respectively.</p>
Fig. 1 in Isolation and identification of 18 unrecorded prokaryotic species from the intestinal tracts of aquatic animals in Korea
Fig. 1. The energy-filtering transmission electron micrographs of the isolated strains. Strains: 1, K33R8; 2, K33T6; 3, G12R3; 4, R13S1; 5, R23R4; 6, R33M6-1; 7, R33M4; 8, K11M4; 9, O13M9; 10, 719; 11, 176; 12, 775; 13, 765; 14, 684; 15, A52; 16, 771; 17, A79; 18, 772.
Between a rock and a hard place: Comparing rock-dwelling animal prevalence across abandoned paddy, orchards, and rock outcrops in a biodiversity hotspot
<p>Rock outcrops are geologically and ecologically unique ecosystems that harbour threatened and endemic biodiversity. These underappreciated, open ecosystems are undergoing rapid land-use changes, and the impacts of these changes on the threatened and endemic biodiversity are poorly understood, compared to the forested ecosystems. The unprotected, low-elevation lateritic plateaus of the northern Western Ghats of India are a case in point; they have high levels of endemism but are experiencing agricultural land-use change to orchards on the one hand and abandonment of traditional paddy cultivation on the other. We compared 1) the availability of loose rocks, a critical microhabitat for saxicolous animals, 2) the prevalence of an endemic caecilian (<em>Gegeneophis seschachari),</em> an endemic gecko (<em>Hemidactylus albofasciatus),</em> and a widespread snake (<em>Echis carinatus),</em> and 3) the composition and abundance of other rock-dwelling animals across 12 less-disturbed natural rock outcrop sites and 10 sites each in agroforestry plantations and abandoned paddies using time-constrained searches. By surveying 7179 surface rocks, we encountered 5738 individuals from 38 animal taxa. We found that the abundance of large rocks, which were the most-preferred size class of rocks by animals, was higher in abandoned paddy compared to plateaus and orchards. However, the prevalence of the reptiles <em>H. albofasciatus</em> and <em>E. carinatus</em> was highest on undisturbed plateaus. Contrastingly, the prevalence of <em>G. seshachari,</em> a caecilian, was significantly higher under rocks in abandoned paddy than in less-disturbed plateaus or orchards. We also found significant differences between the rock-dwelling faunal assemblages across the three agricultural land-use types. Despite being adapted to persist in extremely variable climates on lateritic plateaus, multiple species/groups are vulnerable to land-use changes. However, <em>G. seshachari</em> and a few other taxa appear to benefit from certain kinds of agricultural land-use change, highlighting the context-specificity in species responses. This is one of the first studies to determine the impacts of the agricultural conversion of rock outcrops, thereby highlighting the conservation value of habitats that are often classified as wastelands.</p>
Data and codes from "How does dispersal shape the genetic structure of animal populations in European cities? A simulation approach"
<p>Codes and data used for "Savary et al. How does dispersal shape the genetic structure of animal populations in European cities? A simulation approach".</p> <p> </p>
Data from: Biological clocks as age estimation markers in animals: a review and meta-analysis
<p>Complete dataset of Methylation and Telomere studies searched, retrieved, analysed, extracted and compared in the review and meta-analysis "<strong>Biological clocks as age estimation markers in animals: a review and meta-analysis".</strong></p>
Animal Traceability Dataset
<p>This is the first version of the dataset for animal traceability ontologies. I created dataset for animal traceability using OWL Ontologies to guide in developments of animal traceability technology.</p>
Fig. 1 in The earliest record of terrestrial animals in Gondwana: A scorpion from the Famennian (Late Devonian) Witpoort Formation of South Africa
Fig. 1. Gondwanan reconstruction with position of the South Pole (star), main latitudes reconstructed for Late Devonian/Early Carboniferous (modified after Scotese & Barrett 1990), and the position of the Waterloo Farm (WF).
"I made the recording because Iam an amateur recording engineer and also work for a radio station. At the time, Iwas researching for a religious programme, for the radio and by pure chance and good luck, Iwas in the centre of York at the time the street preacher was there. Iam building up a personal library of 'ambient sounds' to use on various radio shows as 'sound effects'. The recording was taken outside St Helen's Church in St Helen's Square, in the centre of York. There was a fairly large crowd walking about, shopping. It was a Saturday. Some people were standing and listening to the man, some were mocking him, others didn't even notice. It was a sunny day, with a slight wind. St Helen's square is a large 'meeting place' for people with seats, flowers and usually musicians. I live in the centre of York and hear a lot of very interesting sounds there, everything from busking musicians, to many foreign languages, church bells, animals and much more. Ireally liked the recording of the preacher as it is quite clear that he passionately believes what he is saying. He was unaware that Iwas recording him. Iwish Ihad captured his whole sermon. He, and other members of his church visit the centre of York quite often, and preach there. Idon't know the name of his church." [Jools/vedas]19 in Collecting Sounds. Online Sharing of Field Recordings as Cultural Practice
"I made the recording because Iam an amateur recording engineer and also work for a radio station. At the time, Iwas researching for a religious programme, for the radio and by pure chance and good luck, Iwas in the centre of York at the time the street preacher was there. Iam building up a personal library of 'ambient sounds' to use on various radio shows as 'sound effects'. The recording was taken outside St Helen's Church in St Helen's Square, in the centre of York. There was a fairly large crowd walking about, shopping. It was a Saturday. Some people were standing and listening to the man, some were mocking him, others didn't even notice. It was a sunny day, with a slight wind. St Helen's square is a large 'meeting place' for people with seats, flowers and usually musicians. I live in the centre of York and hear a lot of very interesting sounds there, everything from busking musicians, to many foreign languages, church bells, animals and much more. Ireally liked the recording of the preacher as it is quite clear that he passionately believes what he is saying. He was unaware that Iwas recording him. Iwish Ihad captured his whole sermon. He, and other members of his church visit the centre of York quite often, and preach there. Idon't know the name of his church." [Jools/vedas]19
Animated DTS temperature profiles Speulderbos forest
<p><strong><em><a href="https://www.youtube.com/playlist?list=PL0Ojbg2cPwM8u4ZaGC9WWMtCGCQ5GUTiJ">These videos are also on YouTube for easier viewing</a>.</em></strong></p> <p>Vertical temperature profiles of the air temperature (red) and the wet-bulb temperature (blue) are animated through time. The measurement tower and an example tree is shown on the right. The time shown is in UTC+1</p> <p>Different radiation shielding above canopy was available (or absent), which is shown on the right hand side of the video. From 2017/08/03 onwards, a coiled fiber measures the temperature profile in the bottom 1.0 meters.</p> <p>The measurement method is described in <a href="http://doi.org/10.5194/hess-22-819-2018">doi.org/10.5194/hess-22-819-2018</a></p> <p>Part of the raw data (2016) is available on <a href="https://doi.org/10.4121/uuid:5c81f10a-1249-4b85-8dec-2b029dd88b99">doi.org/10.4121/uuid:5c81f10a-1249-4b85-8dec-2b029dd88b99</a></p>
Animal Assisted Therapy in Dentistry
ClinicalTrials.gov study NCT04708028. IPD Sharing: YES. Countries: 1. Publications: 1.
Integrating Animal-Assisted Therapy Into Trauma-Focused Cognitive-Behavioral Therapy for Maltreated Youth
ClinicalTrials.gov study NCT03135119. IPD Sharing: YES. Countries: 1. Publications: 1.
The supplementary animations, results and the codes of the green-beard simulation study
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Data from: Fungal energy channeling sustains soil animal communities across forest types and regions
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Geomorphology shapes relationships between animal communities and ecosystem function in large rivers
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Tracking small animals in complex landscapes: a comparison of localisation workflows for automated radio telemetry systems
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StoichLife: A global dataset of plant and animal elemental content
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Predation and parasitism as determinants of animal personalities
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Data from: Longitudinal gut microbiome dynamics in relation to age and senescence in a wild animal population
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Data from: Genetic effects of anthropogenic habitat fragmentation on remnant animal and plant populations: a meta-analysis
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ScienceDex guides
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.