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FIGURE 2 in Species clarification of the most important and cultivated Auricularia mushroom "Heimuer": evidence from morphological and molecular data
FIGURE 2. Maximum parsimony strict consensus tree illustrating the phylogeny of Auricularia based on ITS+nLSU sequences. Branches are labeled with parsimony bootstrap proportions (before slanting line) higher than 50% and Bayesian posterior probabilities (after slanting line) more than 0.95.
FIGURE 1 in Species clarification of the most important and cultivated Auricularia mushroom "Heimuer": evidence from morphological and molecular data
FIGURE 1. Maximum parsimony strict consensus tree illustrating the phylogeny of Auricularia based on ITS sequences. Branches are labeled with parsimony bootstrap proportions (before slanting line) higher than 50% and Bayesian posterior probabilities (after slanting line) more than 0.95.
FIGURE 4 in Species clarification of the most important and cultivated Auricularia mushroom "Heimuer": evidence from morphological and molecular data
FIGURE 4. Microscopic structures of Auricularia heimuer (photographed from the holotype). A Cross-section displaying medulla. B abhymenial hairs. C–D Basidia (indicated by a). E–F Basidiospores. Bars: A = 100 μm; B = 10 µm; C = 20 µm; D–E = 10 μm; F = 5 µm.
FIGURE 2. Bothriochloa ewartiana under cultivation. A. Habit. B. Inflorescence. C. Leaf sheath. D. Channeled internode. E. Bearded node. F in Synopsis of the genus Bothriochloa (Poaceae: Andropogoneae) in India
FIGURE 2. Bothriochloa ewartiana under cultivation. A. Habit. B. Inflorescence. C. Leaf sheath. D. Channeled internode. E. Bearded node. F. Keeled sheath.
Fig. 5 in Changes in Assemblages and Diversity Patterns of Carabidae (Coleoptera) from 1997 to 2014 in a Desalinized, Intensively Cultivated Agricultural Landscape in Northern China
Fig. 5. Canonical correspondence analysis of carabid beetles and environmental parameters at field margins of three experimental districts in 1997. Species with encircled codes were not present in 2014. For species names, see Appendix A.
Fig. 4 in Changes in Assemblages and Diversity Patterns of Carabidae (Coleoptera) from 1997 to 2014 in a Desalinized, Intensively Cultivated Agricultural Landscape in Northern China
Fig. 4. Non-linear, two-dimensional scaling of pooled carabid samples at field margins of three experimental districts in 1997 and 2014 based on the chord-normalized expected species shared (CNESS)-index of dissimilarity. a) m = 1, b) m =17 (3 samples at the same experimental district randomly pooled).
Fig. 3 in Changes in Assemblages and Diversity Patterns of Carabidae (Coleoptera) from 1997 to 2014 in a Desalinized, Intensively Cultivated Agricultural Landscape in Northern China
Fig. 3. Non-linear, two-dimensional scaling of pooled carabid samples in the 3rd experimental district in 1997 and 2014 based on the chord-normalized expected species shared (CNESS)-index of dissimilarity. a) m = 1, b) m = 25. FM = field margin; NFM = sites 10 m inside the field; FFM = sites 30 m (in 1997) / 20 m (in 2014) inside the field (3 samples of equal treatments randomly pooled).
Fig. 2 in Changes in Assemblages and Diversity Patterns of Carabidae (Coleoptera) from 1997 to 2014 in a Desalinized, Intensively Cultivated Agricultural Landscape in Northern China
Fig. 2. Rarefaction and extrapolation (R/E) curves of carabid assemblages in an agricultural landscape. a) Comparing carabid samples from all plots in Quzhou in 1997 and 2014, b) Comparing carabid samples from field margin plots and in-field plots at the 3rd experimental district (Situan village) in 1997, c) Comparing carabid samples from all field margin plots and in-field plots at the 3rd experimental district in 2014, d) Comparing carabid samples from all field margin plots at the 3rd experimental district between 1997 and 2014, e) Comparing carabid samples from all in-field plots at the 3rd experimental district between 1997 and 2014, f) Comparing carabid samples from all field margin plots across all three experimental districts between 1997 and 2014.
FIGURE 2. Xanthosoma isabellanum. A. Cultivated plant. B. Inflorescence and two leaves. C in Anthurium gallardoae and Xanthosoma isabellanum (Araceae), two new species from coastal Ecuador
FIGURE 2. Xanthosoma isabellanum. A. Cultivated plant. B. Inflorescence and two leaves. C. Inflorescence at anthesis. D. Longitudinally sectioned inflorescence displaying the purple interior of lower spathe, pistillate flowers, and sterile portion fully covered by staminodia.
FIGURE. Habit of Hylaeaicum. A–C. H. pendulum (Leme 1979). D. H. pendulum var. brevifolium from Pastaza, Ecuador, in cultivation in Selby Botanical Gardens (SEL 82-419). E–F. H. tarapotoense from San Martin, Peru (Leme 1977). E. Habit. F. Detail of the inflorescence. in Re-evaluation of the Amazonian Hylaeaicum (Bromeliaceae: Bromelioideae) based on neglected morphological traits and molecular evidence
FIGURE. Habit of Hylaeaicum. A–C. H. pendulum (Leme 1979). D. H. pendulum var. brevifolium from Pastaza, Ecuador, in cultivation in Selby Botanical Gardens (SEL 82-419). E–F. H. tarapotoense from San Martin, Peru (Leme 1977). E. Habit. F. Detail of the inflorescence.
FIGURE. Habit of Hylaeaicum. A–B. H. myrmecophilum from Brazil, which flowered in cultivation (Leme 2555). C. H. aff. myrmecophilum from Venezuela (Leme 3487). D. H. margaretae from Amazonas state, Brazil, cultivated in Burle Marx collection (Leme 2331). E. H. levianum from Venezuela (Leme 2777). F. H. levianum (Leme 5639A). in Re-evaluation of the Amazonian Hylaeaicum (Bromeliaceae: Bromelioideae) based on neglected morphological traits and molecular evidence
FIGURE. Habit of Hylaeaicum. A–B. H. myrmecophilum from Brazil, which flowered in cultivation (Leme 2555). C. H. aff. myrmecophilum from Venezuela (Leme 3487). D. H. margaretae from Amazonas state, Brazil, cultivated in Burle Marx collection (Leme 2331). E. H. levianum from Venezuela (Leme 2777). F. H. levianum (Leme 5639A).
FIGURE. Habit of Hylaeaicum. A–B. H. wurdackii from Napo, Ecuador (Leme 2567). C. H. aff. myrmecophilum from Iquitos, Peru (Leme 2553). D. H. stoloniferum from Peru, near Letícia, Colombia (photo by D. Cathcart). E–F. H. peruvianum in cultivation in Selby Botanical Gardens (SEL 90-821). E. Details of the stolons. F. Habit. in Re-evaluation of the Amazonian Hylaeaicum (Bromeliaceae: Bromelioideae) based on neglected morphological traits and molecular evidence
FIGURE. Habit of Hylaeaicum. A–B. H. wurdackii from Napo, Ecuador (Leme 2567). C. H. aff. myrmecophilum from Iquitos, Peru (Leme 2553). D. H. stoloniferum from Peru, near Letícia, Colombia (photo by D. Cathcart). E–F. H. peruvianum in cultivation in Selby Botanical Gardens (SEL 90-821). E. Details of the stolons. F. Habit.
FIGURE. Euphorbia hyssopifolia (individuals cultivated at Giardino dei Semplici of Florence, Tuscany): A) detail of leaves, B) detail of cymes (scale bar = 1 cm), C) detail of cyathium and capsule (scale bar = 1 mm), D) detail of stipule (scale bar = 1 mm). in Synopsis of Euphorbia section Anisophyllum (Euphorbiaceae) in Italy, with an insight on variation of distribution over time in Tuscany
FIGURE. Euphorbia hyssopifolia (individuals cultivated at Giardino dei Semplici of Florence, Tuscany): A) detail of leaves, B) detail of cymes (scale bar = 1 cm), C) detail of cyathium and capsule (scale bar = 1 mm), D) detail of stipule (scale bar = 1 mm).
FIGURE. Euphorbia hirta (individuals cultivated at Giardino dei Semplici of Florence, Tuscany): A) detail of leaves and position of glomerules, B) detail of stem hairiness, C) detail of glomerule. in Synopsis of Euphorbia section Anisophyllum (Euphorbiaceae) in Italy, with an insight on variation of distribution over time in Tuscany
FIGURE. Euphorbia hirta (individuals cultivated at Giardino dei Semplici of Florence, Tuscany): A) detail of leaves and position of glomerules, B) detail of stem hairiness, C) detail of glomerule.
FIGURE. Euphorbia glyptosperma (individuals cultivated at Giardino dei Semplici of Florence, Tuscany): A) detail of leaves, B) detail of cyathium. in Synopsis of Euphorbia section Anisophyllum (Euphorbiaceae) in Italy, with an insight on variation of distribution over time in Tuscany
FIGURE. Euphorbia glyptosperma (individuals cultivated at Giardino dei Semplici of Florence, Tuscany): A) detail of leaves, B) detail of cyathium.
FIGURE. Euphorbia ophthalmica (individuals cultivated at Giardino dei Semplici of Florence, Tuscany): A) detail of leaves, B) detail of glomerule, C) detail of cyathia and capsule. in Synopsis of Euphorbia section Anisophyllum (Euphorbiaceae) in Italy, with an insight on variation of distribution over time in Tuscany
FIGURE. Euphorbia ophthalmica (individuals cultivated at Giardino dei Semplici of Florence, Tuscany): A) detail of leaves, B) detail of glomerule, C) detail of cyathia and capsule.
FIGURE 1. Mahonia lancasteri. A. Habit. B. Leaf underside. C, D in Mahonia lancasteri (Berberidaceae), a new species originating from Sichuan (China) described from cultivation
FIGURE 1. Mahonia lancasteri. A. Habit. B. Leaf underside. C, D. Leaves of three different cultivated forms of M. bealei (left) and M. lancasteri (extreme right), adaxial (C) and abaxial views (D). E. Top of a main raceme showing bifurcations. F. Flower with some sepals removed. G. Stamen. H. Pistil. I. Infructescence. J. Young fruit showing immature seeds. K. Young plant with three simple racemes. L. Flowering raceme. M. Flowering raceme showing conspicuous bracts. N. O. Mature plant and inflorescences. P. Mature plant with inflorescences at bud stage. Q. Mahonia lancasteri, with Roy Lancaster (left) and Mikinori Ogisu in Lezhi county, Sichuan, China (2012). Scale bars represent 10 cm (A, B, C, D, K, N, O, P), 10 mm (A, B, C, D, M) or 5 mm (G, J, H). All photos by O. Colin except Q by John Massey.
Effects of Chlorella vulgaris on P release from ferric phosphate sediment by consecutive cultivation
Iron phosphate (Fe-P), the active compound is part of the main storage paths of phosphorus, especially in P-pollution environment. The re-release of Fe-P is a danger sign during microalgae remediation. In this work, pre-incubated Chlorella vulgaris is cultured in BG-11 culture medium with different amounts of quantifying Fe-P. The effects of Fe-P re-release on biomass, flocculation and removal of PO43- are investigated. The results indicated that Chlorella vulgaris can promote the dissolution and release of Fe-P when the pH is 7, the release amount of Fe-P (Q) in 200mL water reaches 0.055-0.45mg d-1 under the Chlorella vulgaris concentration of 5.6×105-8×105cell mL-1. Meanwhile, the growth of Chlorella vulgaris will be inhibited due to flocculation behavior of Fe3+ in the release stage, this goes hand in hand with the specific growth rate of 0.3-0.4d-1 and below 30% phosphorus removal rate. However, this process in the long run means a favorable transformation that Fe-P becomes a bioavailable phosphorus as a resource under the action of Chlorella vulgaris. Microalgae outbreaks may also be triggered by persistent interactions between Fe-P and Chlorella vulgaris. The study provides an important reference for the application of Chlorella vulgaris in a Fe-P rich environment.
Does experimental seaweed cultivation affect benthic communities and shorebirds? Applications for extensive aquaculture
<p>Extensive seaweed aquaculture is a growing industry expected to expand globally due to its relatively low impact and benefits in the form of ecosystem services. However, seaweeds are ecosystem engineers that may alter coastal environments by creating complex habitats on previously bare mudflats. These changes may scale up to top-consumers, particularly migratory shorebirds, species of conservation concern that regulate trophic webs at these habitats. Understanding how habitats are transformed and how this affects different species is critical to direct ecological applications for commercial seaweed management. We experimentally assessed through a Before-After Control-Impact (BACI) design the potential changes exerted by Gracilaria chilensis farming on bare mudflats on the abundance, biomass, and assemblage structure of benthic macroinvertebrates, and their scaled-up effects on shorebirds' habitat use and prey consumption. Experimental cultivation of G. chilensis significantly affects different components of biodiversity that scale-up from lower to upper trophic levels. The total biomass of benthic macroinvertebrates increased with seaweed cultivation and remained high for at least two months after harvest, boosted by an increase in the median size of polychaetes, particularly Nereids. Tactile-foraging shorebirds tracked these changes at the patch level increasing their abundance and spending more time foraging at seaweed cultivated plots. These results suggest that seaweed farming has the potential to impact shorebird populations by favouring tactile-foraging species which could lead to a competitive disadvantage to species that rely on visual cues. Therefore, the establishment of new seaweed farms in bare mudflats at key sites for shorebirds must be planned warranting habitat heterogeneity (i.e., cultivated and non-cultivated areas) at the landscape level and based on an experimental approach to account for local characteristics. Fostering properly designed extensive seaweed farming over other aquaculture industries with greater negative environmental impacts would provide benefits for human well-being and for ecosystem functions.</p>
Supporting Information: High-throughput Saccharomyces cerevisiae cultivation method for credentialing-based untargeted metabolomics
<p>F1: Physiological Constraints: Growth rate, glucose uptake, and intracellular 13C succinate concentration</p> <p>F2: PAVE input and adduct list</p> <p>F3: Credentialing results, HILIC data</p> <p>F4: Credentialing results, RP lipids data</p> <p>F5: HILIC Level 2A annotation with MS-DIAL and manual mass shift quality control</p> <p>F6: R script for the MetFrag/PCLite-based annotation</p> <p>F7: HILIC annotation with MetFrag/PCLite</p> <p>F8: RP-lipids annotation with MS-DIAL</p> <p>F9: Level 1 compounds identification</p> <p>F10: InChKey-based YMDB and HMDB recovery analysis </p> <p>F11: InChKey-based comparison with PAVE publication</p> <p>F12: Statistic Results</p> <p>F13: Supernatant measurements</p>
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
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DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.