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515
datasets available to search
ShareScore release 0.9.0
Dataset results
515 results for “CoL”
miRNA-seq analysis using Arabidopsis Col-0 WT and hasty KO mutant
GEO Series GSE266624. Arabidopsis thaliana. 12 samples. Type: Non-coding RNA profiling by high throughput sequencing.
h3k4me2_colxc24_chr4-Analysis of epigenomic changes in hybrids Arabidopsis thaliana Col-0, C24 and Cvi accessions
GEO Series GSE25060. Arabidopsis thaliana. 8 samples. Type: Genome variation profiling by genome tiling array; Genome binding/occupancy profiling by genome tiling array.
Expression data from Arabidopsis Col, C24 and their F1 hybrid at 15 DAS
GEO Series GSE160630. Arabidopsis thaliana. 9 samples. Type: Expression profiling by array.
Submergence-responsive genes in Col-0
GEO Series GSE182724. Arabidopsis thaliana. 6 samples. Type: Expression profiling by high throughput sequencing.
RNA-seq of floe1-1 vs Col-0 seeds
GEO Series GSE167280. Arabidopsis thaliana. 18 samples. Type: Expression profiling by high throughput sequencing.
Next Generation Sequencing of Wild Type (Col-0), fio1-1 and fio1-2 methylated RNA immunoprecipitation sequencing in Arabidopsis thaliana
GEO Series GSE171924. Arabidopsis thaliana. 3 samples. Type: Other.
ChIP-seq of histone modifications in Arabidopsis thaliana Col-0, clf-29, elf6-126,ino80-5 and elf6-126/ino80-5 using H2AZ, H3, H3K4me3 and H3K27me3 antibodies as well as input DNA control
GEO Series GSE283110. Arabidopsis thaliana. 44 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Allele specific mRNA-seq expression profiling in Arabidopsis thaliana Col and Ler reciprocal F1 hybrid embryo and endosperm
GEO Series GSE30511. Arabidopsis thaliana. 4 samples. Type: Expression profiling by high throughput sequencing.
Arabidopsis thaliana ecotype Col-0 versus T-DNA mutant sir1-1
GEO Series GSE20670. Arabidopsis thaliana. 6 samples. Type: Expression profiling by array.
RNAseq of Arabidopsis thaliana Col-0 inflorescences
GEO Series GSE74717. Arabidopsis thaliana. 2 samples. Type: Expression profiling by high throughput sequencing.
Expression data from Col, brm-1, clf-29 and brm-1 clf-29 14-d-old seedlings
GEO Series GSE53621. Arabidopsis thaliana. 12 samples. Type: Expression profiling by array.
h3k27me3_c24-Analysis of epigenomic changes in hybrids Arabidopsis thaliana Col-0, C24 and Cvi accessions
GEO Series GSE25058. Arabidopsis thaliana. 7 samples. Type: Genome variation profiling by genome tiling array; Genome binding/occupancy profiling by genome tiling array.
During development, the Sku6 mutant roots engage different genes than wild type Col-0 roots, either on the ground or in spaceflight.
The wild type Col-0 plants and the Sku-6 mutant plants of the Col-0 background were germinated on ISS or on the ground and the gene expression profiles in roots at 4 days or 8 days were established. The Sku6 gene (At2g03680) codes for a protein that localizes to microtubule within the cortical array and putatively acting as an intramolecular linker. The development of Col-0 and Sku-6 plants on orbit differs from that on the ground as demonstrated by the comparison of the gene expression profiles between 4 days old to 8 days old plant in the two environments. However the development of Sku-6 mutant plants also differs from Col-0 at either age and in either environment, suggesting the role of the genetic background in these developmental decisions. The 4 days old Sku-6 roots in orbit engaged more genes than the 4 days old Col-0 roots in orbit but also more than the 4 days old Sku-6 roots on the ground. Overall the 4 days old roots differentially expressed more genes in spaceflight relative to ground than the 8 days old roots of either genotype.
Transcriptome profiling of ozone responses of Arabidopsis thaliana natural accessions Col-0 and Cvi-0, and a near-isogenig line Col-S with Cvi-0's ozone sensitivity introgressed into Col-0
GEO Series GSE102363. Arabidopsis thaliana. 18 samples. Type: Expression profiling by high throughput sequencing.
Comparative expression analysis of the Arabidopsis CK-signaling ahp4-1 mutant and wild type (WT) plants (Col-0) under dehydration conditions
GEO Series GSE95614. Arabidopsis thaliana. 18 samples. Type: Expression profiling by array.
Transcriptomic analysis of Col and arf7 responding to auxin in hypocotyl
GEO Series GSE136635. Arabidopsis thaliana. 4 samples. Type: Expression profiling by high throughput sequencing.
Transcriptomic profile of bpm2,3,5 triple mutant and Col-0
GEO Series GSE131024. Arabidopsis thaliana. 8 samples. Type: Expression profiling by array.
Transcriptomic characterization of spl7 and Col-0 ecotypes of Arabidopsis reveals new aspects of Fe-Cu crosstalk
GEO Series GSE104916. Arabidopsis thaliana. 54 samples. Type: Expression profiling by high throughput sequencing.
Transcriptome-wide analysis of gene expression using detached first-pair rosette leaves before culture (time 0) and 1 day after culture (DAC) from 9-day-old, 12-day-old and 15-day-old Col-0 seedlings
GEO Series GSE108253. Arabidopsis thaliana. 18 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide RNA-Seq of rRNA depleted total RNA from Arabidopsis thaliana WT (Col-0) and pumpkin mutant
GEO Series GSE121776. Arabidopsis thaliana. 4 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.