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1,840 results for “Representative”
Fig. 2 in The first fossil representative of the water strider subfamily Ptilomerinae (Heteroptera: Gerromorpha: Gerridae) in the Oligocene paleolake of Murs (southern France) with some palaeoecological considerations
Fig. 2. Oligoptilomera luberonensis gen. et sp. nov., holotype (PNRL 2715), part, photographed under normal light. Scale bar = 5 mm.
Fig. 1 in The first fossil representative of the water strider subfamily Ptilomerinae (Heteroptera: Gerromorpha: Gerridae) in the Oligocene paleolake of Murs (southern France) with some palaeoecological considerations
Fig. 1. Location map and geological context of the 'Les Vergiers' fossiliferous locality in Murs (Vaucluse, France). A. Geographical position of Murs in France and within the National Natural Reserve of Luberon. B. Stratigraphic log of the 'Les Vergiers' from the 'Sables et grès verts de la Valette-dePernes' to the 'Marnes et grès verts de Murs'.
Mycobacterium representative kraken2 database
<p>A kraken2 database built from the a representative <em>Mycobacterium</em> set of genomes. This archive contains the three files required by kraken2, hash.k2d, opts.k2d, and taxo.k2d, along with inspect.txt, which is obtained by running kraken2-inspect on the database.</p> <p>The genomes for this database were downloaded wiuth genome_updater.sh (v0.6.3; https://github.com/pirovc/genome_updater) with one RefSeq genome from each species in the Mycobacteriaceae family, plus one RefSeq genome from each species in the following genera: <em>Klebsiella, Escherichia, Salmonella, Enterobacter, Streptococcus, Staphylococcus, Pseudomonas, Xanthomonas</em>, and <em>Bifidobacterium</em>.</p> <pre><code>genome_updater.sh -A "species:1" -m -a -M "gtdb" -f "genomic.fna.gz" -g "bacteria" -d "refseq" -T "f__Mycobacteriaceae,g__Klebsiella,g__Escherichia,g__Enterobacter,g__Salmonella,g__Streptococcus,g__Staphylococcus,g__Pseudomonas,g__Xanthomonas,g__Bifidobacterium" -o GTDB_Mycobacterium/ </code></pre> <p>The python script prepare_kraken_fasta.py was then used to prepare the assemblies for use in kraken with the following command</p> <pre><code>python prepare_kraken_fasta.py -r -x GCF_932530395.1,GCF_017190695.1,GCF_020735285.1,GCA_014701265.1,GCF_000013925.1,GCF_016756075.1,GCF_010727125.1,GCF_001307545.1 -o Mycobacterium.fna -s assembly_summary.txt GTDB_Mycobacterium/</code></pre> <p>The database was then built with kraken2 using the following commands</p> <pre><code>kraken2-build --download-taxonomy --db db/ kraken2-build --add-to-library Mycobacterium.fna --db db/ kraken2-build --build --db db/ --threads 16</code></pre>
Deconstruction of rheumatoid arthritis synovium defines inflammatory subtypes - Supplementary Figure 4 representative histology images
<p>This includes the original full-size representative histology images presented in Supplementary Fig. 4 for the paper "Zhang*, Jonsson*, Nathan*, Millard*, et al, Deconstruction of rheumatoid arthritis synovium defines inflammatory subtypes, Nature, 2023<strong>"</strong>.</p> <p>Representative fragments from patients in each CTAP, showing composite and individual staining of each marker in the lymphocyte panel or stromal cell panel. A total of 150 fragments from 36 individuals (mean 4.2 fragments per individual, range 2-9 fragments per individual) were stained in batches and analyzed as a single cohort.</p>
FIGURE 3 Bayesian consensus tree representing the known Bathynellidae taxa constructed using COI, 16S, 28S, ITS2 and 18S in The role of allopatric speciation and ancient origins of Bathynellidae (Crustacea) in the Pilbara (Western Australia): two new genera from the De Grey River catchment
FIGURE 3 Bayesian consensus tree representing the known Bathynellidae taxa constructed using COI, 16S, 28S, ITS2 and 18S alignments and model partitioning implemented in MrBayes. Numbers on branches represent Bayesian posterior probabilities followed by maximum likelihood bootstrap percentage. Bathynellinae and Gallobathynellinae clades are collapsed for easier interpretation.
Fig. 17. Diagram representing a in Bumblebees with big teeth: revising the subgenus Alpigenobombus with the good, the bad and the ugly of numts (Hymenoptera: Apidae)
Fig. 17. Diagram representing a corridor-dispersal model, encompassing a set of short-distance dispersal events permitted (in either direction) between the proposed areas of endemism, based on unique taxa, the geographical proximity of these areas, and the likely disposition of corridors with suitable habitat and favourable climates in the past.
Figure 8 Relationship between host parasitism rate and mean parasitoid load per host. Each data point represents 1 in Infection behavior, life history, and host parasitism rates of Emblemasoma erro (Diptera: Sarcophagidae), an acoustically hunting parasitoid of the cicada Tibicen dorsatus (Hemiptera: Cicadidae)
Figure 8 Relationship between host parasitism rate and mean parasitoid load per host. Each data point represents 1 year of host population sampling data for a single study site. The solid line (blue in the color figure) represents the linear regression model for the data.
WhiteRoadLines: Dataset of 27,025 images (256x256 pixeles at 0.15 m/ pixel) containing representative road lines and markings labelled for multi-class semantic segmentation
<p>The dataset consists of 27,025 PNG images (256x256 pixels) of high resolution aerial orthoimages at 0,15 m/pixel of resolution. The images contain information related to representative road lines and markings found on highway pavement and is labelled for multi-class semantic segmentation with tree classes of white road<br>lines and markings: (1) continuous line (black color), (2) dashed line (dark gray color) and (3) separation of entry and exit lanes (light gray color), together with (4) the background (white color). <br> </p><p>The dataset has been created in the framework of the SROADEX project to train a multiclass semantic segmentation process based on Deep Learning.<br>The data have been generated using scripts developed in Python using Open Source libraries (GDAL/OGR and MapScript) for rasterization of vector cartography representing the three different types of white road lines. This cartography has been obtained from Spanish official sources (National Geographic Institute) that we have<br>revised and edited in a meticulous and systematic way to verify that the road lines are represented on the cartography according to the orthoimages, available on January 1, 2022 in the download center of the National Center of Geographic Information (CNIG). </p><p>In the digitisation process, 46 homogeneously distributed areas of Spain have been selected. The orthoimages used have been resampled from the original resolution of 0,25m/pixel to 0,15m/pixel, as this is closer to the width of two of the three classes of white lines in the dataset. It resulted in 80% of the images for training (21622), 10% for validation (2702) and 10% for testing (2701). The following table summarises the number of pixels of each category included in each of the three sub-datasets</p><p> </p><p>Set Nº images Class_1 (continuous line) Class_2 (discontinuous line) Class_3 (line defining highway entrance or exit) Class_4 (background)</p><p>Train 21,622 27,633,537 4,543,552 3,284,380 1,381,557,923</p><p>Validation 2,702 3,433,103 570,741 395,646 172,678,782</p><p>Test 2,701 3,435,072 536,838 429,527 172,611,299</p><p>Total 27,025 34,501,712 5,651,131 4,109,553 1,726,848,004</p>
Fig. 6 in The Early Eocene bird Gallinuloides wyomingensis -a stem group representative of Galliformes
Fig. 6. Gallinuloides wyomingensis, left wing (WDC CGR−012). Note the slender, "anseriform" carpometacarpus. Scale bar 20 mm.
Fig. 5 in The Early Eocene bird Gallinuloides wyomingensis -a stem group representative of Galliformes
Fig. 5. Left coracoid (A1, B1, C1) and carpometacarpus (A2, B2, C2) of anseriform and galliform birds in comparison. A. Anas crecca (Anatidae, Anseriformes; SMF 851). B. Gallinuloides wyomingensis (Gallinuloididae, stem group Galliformes; WDC CGR−012). C. Lophortyx gambelii (Phasianidae, crown group Galliformes; SMF 1604). The arrows indicate the facies articularis scapularis of the coracoid which is shallow in crown group Galliformes. Scale bars 5 mm.
Fig. 4 in The Early Eocene bird Gallinuloides wyomingensis -a stem group representative of Galliformes
Fig. 4. Gallinuloides wyomingensis furcula and coracoids (WDC CGR−012). The arrow at the left coracoid indicates the cup−like cotyla scapularis which distinguishes Gallinuloides from crown group Galliformes. Scale bar 20 mm.
Exploring the use of the South African Nest Record Scheme to detect changes in phenology: A case study using four well represented species
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Fine-grain predictions are key to accurately represent continental-scale biodiversity patterns
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Data from: Hippocampal sequences represent working memory and implicit timing
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Data from: A de novo chromosome-level genome assembly of Coregonus sp. “Balchen”: one representative of the Swiss Alpine whitefish radiation
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Synthetic bulk RNA-Seq transcriptomic profiles representing 10 Cancer hallmarks
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Hippocampal ensembles represent sequential relationships among an extended sequence of nonspatial events
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Fig. 6 in Thoridae (Crustacea: Decapoda) can penetrate the Abyss: a new species of Lebbeus from the Sea of Okhotsk, representing the deepest record of the family
Fig. 6. Lebbeus sokhobio sp. nov., ♂ from st. 4-9 (paratype, SMF 51579), live coloration.
GenBank + BOLD CO1 Eukaryotic representative sequence set
<p>This is a representative sequence set for cytochrome oxidase subunit 1 (CO1 or COI) combining all available eukaryotic CO1 sequences from GenBank and BOLD, clustered at 99% similarity.</p> <p> </p> <p>TODO:</p> <p>generate and add 7-level taxonomies for each sequence in this rep set.</p>
Fig. 3 in A new species of Copionodon representing a relictual occurrence of the Copionodontinae (Siluriformes: Trichomycteridae), with a CT-scan imaging survey of key subfamilial features
Fig. 3. Copionodon exotatos, holotype, MZUSP 120631, 45.0 mm SL. Lateral view of head.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.