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1,574 results for “genome sequencing”
indicate branches. above MrBayes numbers by inferred The . supports Ixodes of probability subgenera 22 posterior the of Inference 16 from Bayesian ticks of indicate genomes mitochondrial branches below 40 numbers of The sequences. RAxML nucleotide by the inferred from support inferred bootstrap Phylogenies Likelihood . 2 FIGURE Maximum in A new subgenus, Australixodes n. subgen. (Acari: Ixodidae), for the kiwi tick, Ixodes anatis Chilton, 1904, and validation of the subgenus Coxixodes Schulze, 1941 with a phylogeny of 16 of the 22 subgenera of Ixodes Latreille, 1795 from entire mitochondrial genome sequences
indicate branches. above MrBayes numbers by inferred The . supports Ixodes of probability subgenera 22 posterior the of Inference 16 from Bayesian ticks of indicate genomes mitochondrial branches below 40 numbers of The sequences. RAxML nucleotide by the inferred from support inferred bootstrap Phylogenies Likelihood . 2 FIGURE Maximum
Osmanthus plastid genome sequence for: Plastid genomes reveal evolutionary shifts in elevational range and flowering time of Osmanthus (Oleaceae)
<p><span>Species of <em>Osmanthus</em> are economically important ornamental trees, yet information regarding their plastid genomes (plastomes) has rarely been reported, thus hindering taxonomic and evolutionary studies of this small but enigmatic genus. Here, we performed comparative genomics and evolutionary analyses on plastomes of 16 of the 28 currently accepted species, with 11 plastomes newly sequenced. Phylogenetic studies identified four main lineages within the genus that are here designated: 'Caucasian <em>Osmanthus</em>' (corresponding to <em>O</em>. <em>decorus</em>), '<em>Siphosmanthus</em>' (corresponding to <em>O</em>. sect. <em>Siphosmanthus</em>), '<em>O</em>. <em>serrulatus</em> + <em>O</em>. <em>yunnanensis</em>', and 'Core <em>Osmanthus</em>' (corresponding to <em>O</em>. sect. <em>Osmanthus</em> + <em>O</em>. sect. <em>Linocieroides</em>). Molecular clock analysis suggested that <em>Osmanthus</em> split from its sister clade c. 15.83 Ma. The estimated crown ages of the lineages were the following: genus <em>Osmanthus</em> at 12.66 Ma; '<em>Siphosmanthus</em>' clade at 5.85 Ma; '<em>O. serrulatus </em>+<em> O. yunnanensis</em>' at 4.89 Ma; 'Core <em>Osmanthus</em>' clade at 6.2 Ma. Ancestral state reconstructions and trait mapping showed that ancestors of <em>Osmanthus</em> were spring-flowering and originated at lower elevations. Phylogenetic principal component analysis clearly distinguished spring-flowering species from autumn-flowering species, suggesting that flowering time differentiation is related to the difference in ecological niches. Nucleotide substitution rates of 80 common genes showed a slow evolutionary pace and low nucleotide variations, all genes being subjected to purifying selection.</span></p>
Estimating the rates of adaptive evolution in fungal species using whole-genome sequences - v0.1
<p>GitHub script version v0.1</p>
Public Perception and Policy for SARS-CoV-2 Whole Genome Sequencing and Genomics for All
ClinicalTrials.gov study NCT06441981. IPD Sharing: NO. Countries: 1. Publications: 2.
Rapid Whole Genome Sequencing Study
ClinicalTrials.gov study NCT03385876. IPD Sharing: NO. Countries: 1. Publications: 13.
Engagement of American Indians of Southwestern Tribal Nations in Cancer Genome Sequencing
ClinicalTrials.gov study NCT06207864. IPD Sharing: UNDECIDED. Countries: 1. Publications: 9.
COVID-19 Genomic Sequencing for Nosocomial Outbreak Investigations
ClinicalTrials.gov study NCT05411562. IPD Sharing: YES. Countries: 1. Publications: 1.
Precision Medicine for Liver Tumours With Quantitative Magnetic Resonance Imaging and Whole Genome Sequencing
ClinicalTrials.gov study NCT04597710. IPD Sharing: NO. Countries: 1. Publications: 1.
Genome Sequencing Strategies for Genetics Diagnosis of Patients With Intellectual Disability
ClinicalTrials.gov study NCT04154891. IPD Sharing: Not stated. Countries: 1. Publications: 5.
An Ancillary Pilot Trial Using Whole Genome Sequencing In Patients With Advance Refractory Cancer
ClinicalTrials.gov study NCT01443390. IPD Sharing: Not stated. Countries: 1. Publications: 1.
Diagnostic Odyssey: Whole Genome Sequencing (WGS)
ClinicalTrials.gov study NCT03458962. IPD Sharing: NO. Countries: 1. Publications: 2.
A Study of Consent Forms for Whole Exome and Whole Genome Sequencing
ClinicalTrials.gov study NCT01927770. IPD Sharing: Not stated. Countries: 1. Publications: 4.
Diagnostic Significance of Single Center, Open and Prospective Evaluation of <Sup>18<Sup>F-FDG PET/CT Dynamic Imaging and Genomic Sequencing in Detecting Metastatic Lesions and Differentiating Multipl
ClinicalTrials.gov study NCT03679936. IPD Sharing: UNDECIDED. Countries: 1. Publications: 1.
Integrating Whole Genome Sequencing and Digital Twins Into the Management of Hypercholesterolemia in Emiratis
ClinicalTrials.gov study NCT06535542. IPD Sharing: YES. Countries: 1. Publications: 6.
Genome Transplant Dynamics: Non-invasive Sequencing-based Diagnosis of Rejection
ClinicalTrials.gov study NCT01985412. IPD Sharing: Not stated. Countries: 1. Publications: 6.
Mechanisms of Inherited Retinal Dystrophies Using Whole Genome Sequencing and in Vitro and in Vivo Models
ClinicalTrials.gov study NCT05793515. IPD Sharing: UNDECIDED. Countries: 1. Publications: 1.
The Breast Duct: Pilot Study of Genomic Sequencing of Exfoliated Ductal Cells Obtained Through Endoscopy and Lavage
ClinicalTrials.gov study NCT02121873. IPD Sharing: Not stated. Countries: 1. Publications: 5.
Cancer Predisposition Testing by Family-based Whole-genome Sequencing (WGS) in Every Child With Newly Diagnosed Cancer
ClinicalTrials.gov study NCT04903782. IPD Sharing: NO. Countries: 1. Publications: 1.
Whole Genome Sequencing in the Detection of Rare Undiagnosed Genetic Diseases in Children in China
ClinicalTrials.gov study NCT03424772. IPD Sharing: UNDECIDED. Countries: 1. Publications: 1.
NICUSeq: A Trial to Evaluate the Clinical Utility of Human Whole Genome Sequencing (WGS) Compared to Standard of Care in Acute Care Neonates and Infants
ClinicalTrials.gov study NCT03290469. IPD Sharing: NO. Countries: 1. Publications: 1.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.