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2,063
datasets available to search
ShareScore release 0.9.0
Dataset results
2,063 results for “single cell transcriptomics”
Single cell RNA-sequencing reveal a murine gallbladder cell transcriptome atlas during the process of cholesterol gallstone formation
GEO Series GSE179524. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomic analysis reveals increased regeneration in diseased human inner ears
GEO Series GSE207817. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
Single-cell Transcriptome of Human Choroidal Endothelial Cells and Macrophages in Health and Atrophic Macular Degeneration
GEO Series GSE183320. Homo sapiens. 21 samples. Type: Expression profiling by high throughput sequencing.
A single cell transcriptome atlas of the developing zebrafish hindbrain [scRNA-Seq]
GEO Series GSE141427. Danio rerio. 3 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell Analysis of Transcriptome and TCR Sequencing Reveals Immune Cell Atlas and Functional Heterogeneity of T Cell Repertoire in Murine Heart Transplantation
GEO Series GSE249989. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Integrative Analysis of Spatial Transcriptome with Single-cell Transcriptome and Single-cell Epigenome in Mouse Lungs after Immunization
GEO Series GSE190225. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Single-cell transcriptomic analysis of allergen-specific T cells in allergy and asthma [RNA-Seq]
GEO Series GSE146046. Homo sapiens. 95 samples. Type: Expression profiling by high throughput sequencing.
Bone marrow single cell transcriptome profile 3 months after transplantation in blood cancer patients who received hematopoietic stem cell transplantation
GEO Series GSE292910. Homo sapiens. 5 samples. Type: Expression profiling by high throughput sequencing.
Quantitative single-cell transcriptome-based ranking of engineered AAVs in human retinal explants
GEO Series GSE199840. Homo sapiens. 16 samples. Type: Expression profiling by high throughput sequencing.
Identification of genomic enhancers through spatial integration of single-cell transcriptomics and epigenomics [10X_scATACseq]
GEO Series GSE141586. Drosophila melanogaster. 1 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Single-cell RNA-Seq transcriptome analysis of circular RNAs in mouse embryos
GEO Series GSE53386. Mus musculus; Homo sapiens. 118 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomics of human organoid-derived enteroendocrine cell populations from the small intestine.
GEO Series GSE284419. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptome Atlas reveals embryonic endothelial heterogeneity
GEO Series GSE216970. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Single cell transcriptomics of human abdominal aortic aneurysm [scRNA-seq]
GEO Series GSE237230. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
High throughput single-cell whole transcriptome analysis of induced cardiomyocytes during direct cardiac reprogramming [Bulk-seq]
GEO Series GSE98569. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
Transcriptomics, Regulatory Syntax, and Enhancer Identification in Heterogenous Populations of Mesoderm-Induced ESCs at Single-Cell Resolution
GEO Series GSE198730. Mus musculus. 39 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Single-cell transcriptomics reveals gene signatures and alterations associated with aging in distinct neural stem cell subpopulations
GEO Series GSE100389. Mus musculus. 28 samples. Type: Expression profiling by high throughput sequencing.
Reduced somatosensory innervation alters the skeletal transcriptome at a single cell level in a mouse model of type 2 diabetes
GEO Series GSE272612. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomic and epigenetic analyses in the embryonic mouse cerebellum
GEO Series GSE178546. Mus musculus. 5 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Single-cell transcriptomics identifies altered neutrophil dynamics and accentuated T-cell cytotoxicity in tobacco -flavored e-cigarette -exposed mouse lungs
GEO Series GSE263903. Mus musculus. 10 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.