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5,031
datasets available to search
ShareScore release 0.9.0
Dataset results
5,031 results for “MiRNA”
Differential expression of miRNAs in Retinoblastoma cells (Y79) in response to anti-HMGA2 siRNA treatment
GEO Series GSE51696. Homo sapiens. 4 samples. Type: Non-coding RNA profiling by array.
Plasma exosomal miRNA profiles in pediatric fulminant myocarditis patients and healthy controls
GEO Series GSE221090. Homo sapiens. 6 samples. Type: Non-coding RNA profiling by array.
miRNAs in RPE cells treated by clusterin
GEO Series GSE87115. Homo sapiens. 2 samples. Type: Non-coding RNA profiling by high throughput sequencing.
MiRNA Expression Profiling and Clinical Implications in Prostate Cancer Across Various Stages
GEO Series GSE290219. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide identification of eggplant (Solanum melongena L.) miRNAs and their targets reveals differential regulation of heterostyly
GEO Series GSE81188. Macrobrachium nipponense; Solanum virginianum. 8 samples. Type: Non-coding RNA profiling by array; Non-coding RNA profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
RNA sequencing of miRNA in plasma from myocardial ischemia and reperfusion mice and sham mice
GEO Series GSE148864. Mus musculus. 14 samples. Type: Non-coding RNA profiling by high throughput sequencing.
miRNA expression profiles of EVs from healthy control and MDS patients
GEO Series GSE199980. Homo sapiens. 46 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Analysis of the effect of exogenous auxin on the regulatory relationship between miRNA and its target genes in rose using high-throughput sequencing [RNA-seq]
GEO Series GSE225991. Rosa hybrid cultivar. 10 samples. Type: Expression profiling by high throughput sequencing.
miRNA genes in HMEC and HMF
GEO Series GSE28380. Homo sapiens. 30 samples. Type: Genome binding/occupancy profiling by genome tiling array.
AGO HITS-CLIP Reveals Distinct Patterns of miRNA Regulation of Visceral and Brown Adipose Tissue Identity
GEO Series GSE142677. Mus musculus. 35 samples. Type: Other; Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing.
T cell dysfunction in ARDS based on miRNA and mRNA integration analysis (RNA-Seq)
GEO Series GSE243066. Homo sapiens. 49 samples. Type: Expression profiling by high throughput sequencing.
Bioinformatic Analysis of mRNA and miRNA Expression Patterns In p53 Knock-out C666-1 cells [mRNA]
GEO Series GSE138258. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
miRNA expression in healthy carriers of heterozygous BRCA1 mutation and healthy WT controls
GEO Series GSE60444. Homo sapiens; Mus musculus; Rattus norvegicus. 21 samples. Type: Non-coding RNA profiling by array.
MicroRNA Profiling in Ischemia-Reperfusion Injury of the Gracilis Muscle in Rats (miRNA data)
GEO Series GSE21405. Rattus norvegicus. 4 samples. Type: Non-coding RNA profiling by array.
Lung miRNA expression profiling in a mouse model of chronic obstructive pulmonary disease
GEO Series GSE186955. Mus musculus. 31 samples. Type: Non-coding RNA profiling by array.
Liver macrophages inhibit the endogenous antioxidant response in obesity-associated insulin resistance [miRNA-Seq]
GEO Series GSE132795. Mus musculus. 15 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Analyzing the interactions of mRNAs, miRNAs, lncRNAs and circRNAs to predict competing endogenous RNA networks in glioblastoma
GEO Series GSE86202. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing; Other.
miRNA expression profiles of Platelet microparticles (PMPs)
GEO Series GSE76789. Homo sapiens. 10 samples. Type: Non-coding RNA profiling by array.
Data sets for Perspective: SARS-CoV-2's potential mechanism of regulating cellular responses through depletion of specific host miRNAs
<p>Using a bioinformatic analysis of human miRNA potential interactions with the SARS-CoV-2’s genome, we examined the potential miRNA target sites in 7 coronavirus genomes that include SARS-CoV-2, MERS-CoV, SARS-CoV, and 4 non-pathogenic coronaviruses. (<strong>Data Set 1</strong>).</p> <p><em>Our approach was to examine and compare 3 pathogenic and 4 non-pathogenic strains of HCoVs. The HCoVs' RNA genomes of pathogenic strains were SARS-CoV-2 (NC_045512.2), SARS-CoV (NC_004718.3), MERS-CoV (NC_019843.3). The non-pathogenic strains were HCoV-OC43 (KU131570.1), HCoV-229E (NC_002645.1), HCoV-HKU1 (KF686346.1), and HCoV-NL63 (NC_005831.2). These coronaviruses were tested against the set of 896 confident mature human miRNA sequences that were obtained from the miRBbase v2.21 using the RNA22 v2 microRNA target discovery tool web-server. In order to reduce the false discovery rate of the MTS predictions, the most strict parameters were applied to the default computation workflow using a specificity of 92% versus a sensitivity of 22%.</em></p> <p><em>In <strong>Data set 2</strong>, using the miRDIP database with only top 1% of the most probable targets considered, we analyzed the potential targets of miRNA that could be bound to either the pathogenic, the non-pathogenic or both groups of HCoVs. </em></p> <p>In <strong>Data set 3</strong>, using miRNAFold webserver we identified 10 pre-miRNA sequences in the <em>SARS-CoV-2</em> RNA sequence that could potentially enter the human RNAi pathway.</p> <p>The graphical summary of our working hypothesis is provided in the<strong> graphical abstract</strong>.</p> <p> </p> <p> </p>
miRNA sequencing from BM-MSC and iMSC
<p>miRNA sequencing of Bone Marrow Mesenchymal stromal cells and Induce pluripotent stem cell derived mesenchymal stromal cells apoptotic bodies untreated and licensing with TNF-a + INF-y</p>
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.