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9,671 results for “Leaf”
Data from: Soil microbial communities alter leaf chemistry and influence allelopathic potential among coexisting plant species
While both plant–soil feedbacks and allelochemical interactions are key drivers of plant community dynamics, the potential for these two drivers to interact with each other remains largely unexplored. If soil microbes influence allelochemical production, this would represent a novel dimension of heterogeneity in plant–soil feedbacks. To explore the linkage between soil microbial communities and plant chemistry, we experimentally generated soil microbial communities and evaluated their impact on leaf chemical composition and allelopathic potential. Four native perennial old-field species (two each of Aster and Solidago) were grown in pairwise combination with each species' soil microbial community as well as a sterilized inoculum. We demonstrated unequivocally that variation in soil microbial communities altered leaf chemical fingerprints for all focal plant species and also changed their allelopathic potential. Soil microbes reduced allelopathic potential in bioassays by increasing germination 25–54% relative to sterile control soils in all four species. Plants grown with their own microbial communities had the lowest allelopathic potential, suggesting that allelochemical production may be lessened when growing with microbes from conspecifics. The allelopathic potential of plants grown in congener and confamilial soils was indistinguishable from each other, indicating an equivalent response to all non-conspecific microbial communities within these closely related genera. Our results clearly demonstrated that soil microbial communities cause changes in leaf tissue chemistry that altered their allelopathic properties. These findings represent a new mechanism of plant–soil feedbacks that may structure perennial plant communities over very small spatial scales that must be explored in much more detail.
Data from: Leaf trait variability between and within subalpine grassland species differs depending on site conditions and herbivory
Plant traits are commonly used to predict ecosystem-level processes, but the validity of such predictions is dependent on the assumption that trait variability between species is greater than trait variability within a speciesthe robustness assumption. Here, we compare leaf trait intraspecific and interspecific variability depending on: geographical differences between sites, and five years of experimental herbivore exclusion in two vegetation types of subalpine grasslands in Switzerland. Four-leaf traits were measured from eight herbaceous species common to all 18 sites. Intraspecific trait variability differed significantly depending on site and herbivory. However, the amount and structure of variability depended on the trait measured and whether considering leaf traits separately or multiple leaf traits simultaneously. Leaf phosphorus (P) concentration showed the highest intraspecific variability, while specific leaf area (SLA) showed the highest interspecific variability and displayed intraspecific variability only in response to herbivore exclusion. Species identity based on multiple traits was not predictable. We find intraspecific variability is an essential consideration when using plant functional traits as a common currency not just species mean traits. This is particularly true for leaf nutrient concentrations, which showed high intraspecific variability in response to site differences and herbivore exclusion; a finding which suggests that the robustness assumption does not always hold.
Data from: Macroevolution of leaf defenses and secondary metabolites across the genus Helianthus
Leaf defenses are widely recognized as key adaptations and drivers of plant evolution. Across environmentally diverse habitats, the macroevolution of leaf defenses can be predicted by the univariate trade-off model, which predicts that defenses are functionally redundant and thus trade off, and the resource availability hypothesis, which predicts that defense investment is determined by inherent growth rate and that higher defense will evolve in lower resource environments. Here, we examined the evolution of leaf physical and chemical defenses and secondary metabolites in relation to environmental characteristics and leaf economic strategy across 28 species of Helianthus (the sunflowers). Using a phylogenetic comparative approach, we found few evolutionary trade-offs among defenses and no evidence for defense syndromes. We also found that leaf defenses are strongly related to leaf economic strategy, with higher defense in more resource-conservative species, although there is little support for the evolution of higher defense in low-resource habitats. A wide variety of physical and chemical defenses predict resistance to different insect herbivores, fungal pathogens, and a parasitic plant, suggesting that most sunflower defenses are not redundant in function and that wild Helianthus represents a rich source of variation for the improvement of crop sunflower.
Data from: Herbivore resistance in congeneric and sympatric Nothofagus species is not related to leaf habit
Premise of the study Two fundamental hypotheses on herbivore resistance and leaf habit are the resource availability hypothesis (RAH) and the carbon-nutrient balance hypothesis (CNBH). The RAH predicts higher constitutive resistance by evergreens and the CNBH predicts higher induced resistance by deciduous species. Although support for these hypotheses is mixed, they have rarely been examined in congeneric species. Methods We compared leaf constitutive and induced resistance (as leaf polyphenols and tannin concentrations, and damage level in non-choice experiments) and leaf traits associated with herbivory of coexisting Nothofagus species using 1) a defoliation experiment, and 2) a natural defoliation caused by an outbreak of a common defoliator of Nothofagus species. Key Results In the defoliation experiment, polyphenol and tannin concentrations were similar between deciduous and evergreen species; regardless of leaf habit, polyphenols increased in response to defoliation. In the natural defoliation survey, N. pumilio (deciduous) had significantly higher herbivory, lower C/N ratio and leaf mass per area, and higher nitrogen and phosphorous concentrations than N. betuloides (evergreen); N. antarctica (deciduous) had intermediate values. Polyphenol concentrations and herbivore resistance indicated by the non-choice experiment were lower in N. pumilio than in N. antarctica and N. betuloides, which had similar values. Conclusions Higher herbivory in N. pumilio was associated with a higher nutritional value and a lower level of leaf C-based defenses compared to both the evergreen and the other deciduous species, indicating that herbivore resistance in Nothofagus species cannot be attributed to only leaf habit as predicted by the RAH or CNBH. Please be aware that if you ask to have your user record removed, we will retain your name in the records concerning manuscripts for which you were an author, reviewer, or editor. In compliance with data protection regulations, you may request that we remove your personal registration details at any time. (Use the following URL: https://www.editorialmanager.com/ajb/login.asp?a=r) Please contact the publication office if you have any questions.
Data from: Biotic-drivers of seedling establishment in Neotropical savannas: selective granivory and seedling herbivory by leaf-cutter ants as an ecological filter
Herbivory has been shown to have prominent top-down effects on vegetation in Paleotropical savannas, where consumers of early stages of life history act as demographic bottlenecks. Such impact has been largely ignored in Neotropical savannas, however, despite insect consumption being linked to reduced recruitment of woody species. We hypothesize that Atta leaf-cutter ants – the prevalent herbivores in the Neotropics – alter the establishment of woody plant seedlings in the Brazilian Cerrado by reducing seed availability and seedling survival. We also hypothesize that the demographic effects will be species-specific. To test these hypotheses, we experimentally (i) compared seed removal in areas with and without Atta foraging and (ii) compared the survivorship of seedlings exposed to or protected from Atta foraging. Both experiments were performed with the same common Cerrado species which allowed us to evaluate the potential net effects of consumers at the population and community levels. Overall seed removal rates in sites with Atta foraging were greater than those where ants were absent (59.2% and 39.2% of seeds removed, respectively). There were differences in removal for 10 of the 12 tested species, with per species removal 1.1- to 3.8-fold greater in areas with Atta foraging. On transplanted plants, 45% of seedlings exposed to Atta were attacked, resulting in a survival 7.6% lower than that of protected seedlings. Seedling survival was 11.8–31.5% lower in five species, with the largest differences in survival between treatments during the dry season. Taken together, these results support the hypothesis that consumers can lead to demographic bottlenecks in Neotropical savanna plant species, with effects varying among life-history stages and between species. Synthesis. Granivory by ants has been linked to reduced seedling recruitment of woody species in the Brazilian Cerrado. Our results show that leaf-cutter ants may largely limit early seedling establishment of woody species by reducing seed availability and seedling survival with differential species-specific effects. Atta ants may therefore be acting as an ecological filter, which coupled with potential selectivity in foraging on reproductive life-history stages, may ultimately influence the relative abundance of different species and hence the structure and composition of Cerrado vegetation.
Data from: Leaf size in three generations of a dioecious tropical tree, Ocotea tenera (Lauraceae): sexual dimorphism and changes with age
PREMISE OF THE STUDY: In dioecious species, selection should favor different leaf sizes in males and females whenever the sexes experience distinct environments or constraints, such as different costs of reproduction. We took advantage of a long-term experimental study of Ocotea tenera (Lauraceae), a dioecious understory tree in Monteverde, Costa Rica, to explore leaf size differences between genders and age classes across generations. METHODS: We measured leaf size in adult trees in a natural population, in their adult F1 offspring in two experimental populations, and in their F2 offspring at the seedling stage. Individual trees were measured at various times over a 20-year period. RESULTS: Leaves of female trees averaged 8% longer and 12% greater in area than those of males. Leaves were sexually dimorphic at reproductive maturity. Leaf size declined over the course of most trees' lifetimes. Heritability estimates for leaf length were positive although not statistically significant (h2 = 0.63, SE = 0.48, P= 0.095). CONCLUSIONS: We ruled out the "ecological causation" hypothesis for sexual dimorphism in leaf size because male and female trees co-occurred in the same habitats. Sexual dimorphism appeared not to result from genetic or phenotypic correlations with other traits such as height or flower size. Rather, females appear to compensate for higher costs of reproduction and diminished photosynthetic capacity by producing larger leaves. Additive genetic variance in leaf size, a prerequisite for an evolutionary response to selection for sexual dimorphism, was suggested by positive (although only marginally significant) heritability estimates.
Data from: Weak coordination between leaf structure and function among closely related tomato species
Theory predicts that natural selection should favor coordination between leaf physiology, biochemistry and anatomical structure along a functional trait spectrum from fast, resource-acquisitive syndromes to slow, resource-conservative syndromes. However, the coordination hypothesis has rarely been tested at a phylogenetic scale most relevant for understanding rapid adaptation in the recent past or for the prediction of evolutionary trajectories in response to climate change. We used a common garden to examine genetically based coordination between leaf traits across 19 wild and cultivated tomato taxa. We found weak integration between leaf structure (e.g. leaf mass per area) and physiological function (photosynthetic rate, biochemical capacity and CO2 diffusion), even though all were arrayed in the predicted direction along a 'fast–slow' spectrum. This suggests considerable scope for unique trait combinations to evolve in response to new environments or in crop breeding. In particular, we found that partially independent variation in stomatal and mesophyll conductance may allow a plant to improve water-use efficiency without necessarily sacrificing maximum photosynthetic rates. Our study does not imply that functional trait spectra, such as the leaf economics spectrum, are unimportant, but that many important axes of variation within a taxonomic group may be unique and not generalizable to other taxa.
Data from: Leaf-litter decomposition and macroinvertebrate assemblages along an urban stream gradient in Puerto Rico
Urbanization is a major land use form that has large impacts on ecosystems. Urban development in the watershed impacts stream ecosystems by increasing nutrient and organic matter loads, altering hydrology, and reducing biodiversity. Puerto Rico is an ideal location to assess and monitor the effects of urbanization on streams, because it is increasingly urbanized and streams do not receive inputs of untreated sewage, characteristic of many other tropical urban areas. The objective of this study was to determine how leaf-litter decomposition and aquatic macroinvertebrate assemblages varied along a tropical urban gradient. We conducted the study in the Río Piedras watershed, San Juan Metropolitan Area, in six low order streams that formed an urban gradient ranging from 10 to 70% urban land cover. At each stream, we placed six 5g leaf bags of Ficus longifolia in three different pools and collected one bag on each sampling date. Decomposition rates were fast in forested streams (range 0.021 – 0.039 day-1) and decreased with increasing urbanization (range 0.007 – 0.008 day-1). Rates were strongly and negatively correlated with percent impervious surface cover (R= 0.81, p=0.01). Functional feeding group diversity was higher in forested streams, with the presence of shredders. Decomposition rates were significantly and positively correlated with functional feeding group diversity and abundance (R= 0.66, p= 0.04). Overall, our results show that urbanization affected the environment and macroinvertebrate diversity resulting in large negative effects on stream ecosystem function.
Data from: Regular or covert sex defines two lineages and worldwide superclones within the leaf-curl plum aphid (Brachycaudus helichrysi, Kaltenbach)
Asexual reproduction occurs widely in plants and animals, particularly in insects. Aphid species usually reproduce by cyclic parthenogenesis, but many species include obligate asexual lineages. We recently showed that the leaf-curl plum aphid, Brachycaudus helichrysi, actually encompasses two lineages, B. helichrysi H1 and H2. Ecological data suggest that these lineages have different life cycles. We conducted a large population genetic study, based on 14 microsatellite loci, to infer their respective life cycles and investigate their population structure and geographic distribution. Brachycaudus helichrysi H1 displayed the genetic signature of cyclical parthenogenesis, using plum trees as primary hosts for sexual reproduction, as classically described for B. helichrysi. This global survey showed that the Central Asian population of H1 was clearly differentiated from American - European populations. By contrast, B. helichrysi H2 displayed the typical signature of obligate asexual reproduction. H2 encompassed at least eight highly successful genotypes or superclones. This lack of ability to undergo sexual reproduction was confirmed for one of the superclones by sex induction experiments. We found only one B. helichrysi H2 population that underwent sexual reproduction, which was collected from peach trees, in Northern India. Our results confirm that H1 and H2 have different life cycles. Brachycaudus helichrysi H1 is clearly heteroecious using plum trees as primary hosts while B. helichrysi H2 encompasses several anholocyclic lineages and some heteroecious populations that until now have only been found associated with peach trees as primary hosts. We discuss implications of these findings for the pest status of B. helichrysi lineages.
Data from: Males, but not females, perform strategic mate searching movements between host plants in a leaf beetle with scramble competition polygyny
1. Mate searching is assumed to be performed mostly by males, but when females benefit from multiple mating or are under risk of failing to mate, they may also perform mate searching. This is especially important in scramble competition polygynies, in which mate searching is the main mechanism of mate competition. Typically, more mobile individuals are expected to achieve higher mating success because mobility increases their probability of finding mates. 2. If we assume individual movements are mainly explained by mate searching in scramble competition polygynies, we can investigate searching strategies by asking when individuals should leave their location and where they should go. We hypothesize that individuals will leave their locations when mating opportunities are scarce and will seek spatially close sites with better mating opportunities. 3. We tested these hypotheses for males and females of Leptinotarsa undecimlineata, a leaf beetle with scramble competition polygyny in which both sexes are promiscuous. Individuals mate and feed exclusively on Solanum plants, thus individual movements can be described as switches between plants. 4. Females were less likely than males to leave isolated plants, and both males and females moved preferentially to neighbouring plants. Males were more likely to leave when the local number of females was low, and the number of males was high. They moved to plants with more females, a behaviour consistent with a mate searching strategy. Females were more likely to move to plants with fewer males and many females, a behaviour consistent with male harassment avoidance. 5. Strategic movement is widely considered in foraging context, but seldom in a mate searching context. Considering that selection to minimize searching costs, maximize mating success, and minimize harassment may be ubiquitous in nature, we argue that strategic movements by mate searching individuals are likely to occur in many species.
Data from: Leaf carbon and oxygen isotopes are coordinated with the leaf economics spectrum in Mediterranean rangeland species
The leaf economics spectrum (LES) describes covariation of traits relevant to carbon and nutrient economics across plant species, but much less is known about the relationship between the LES and leaf water economy. We propose an approach combining the measurement of two leaf traits related to water use economy, leaf carbon (δ13C) and oxygen (δ18O) isotopic composition, and the measurement of leaf morphological and nutrient traits to investigate the link between leaf carbon and nutrient economics and water use. We tested the relationships between leaf traits linked to carbon and nutrient use within the LES and water use traits using leaf δ18O as a proxy of stomatal conductance (gs) and δ13C as a proxy of intrinsic water use efficiency (WUEi) across 15 Mediterranean rangeland species grown in an irrigated common garden and in a natural grassland in Southern France. The target species spanned a wide range of variation in leaf morphological and nutrient trait values and a wide range of leaf δ18O and δ13C values. PCA analysis revealed multiple associations among leaf morphology, nutrients and isotopic composition, with the first axis alone explaining 56.0% of the total variation across species. Leaf δ18O and δ13C covaried with leaf morphology and leaf nutrient concentrations along a single resource use axis. Species with high leaf δ18O and δ13C (low gs and high WUEi) exhibited a resource-conservative strategy (high LDMC, low leaf N, P and K) whereas species with low leaf δ18O and δ13C (high gs and low WUEi) showed a more resource-acquisitive strategy (high SLA and leaf N, P and K). These leaf trait syndromes and resource use strategies were strongly conserved across sites with contrasting environmental conditions, indicating that foliar δ18O and δ13C can be included as an integral part of the LES for this set of rangeland species. Overall, the data suggest a tight coupling and coordination between water, carbon and nutrient use strategies across herbaceous plant species. A dual δ18O and δ13C isotope approach combined with LES trait measurements is a promising tool to more comprehensively assess the diversity of resource use strategies among coexisting plant species.
Data from: A modern ampelography: a genetic basis for leaf shape and venation patterning in Vitis vinifera
Terroir, the unique interaction between genotype, environment, and culture, is highly refined in domesticated grape, Vitis vinifera. Towards cultivating terroir, the science of ampelography tried to distinguish thousands of grape cultivars, without the aid of genetics. This led to sophisticated phenotypic analyses of natural variation in grape leaves, which within a palmate-lobed framework exhibit diverse patterns of blade outgrowth, hirsuteness, and venation patterning. Here, we provide a morphometric analysis of >1,200 V. vinifera accessions. Elliptical Fourier Descriptors provide a global analysis of leaf outlines and lobe positioning, while a Procrustes analysis quantitatively describes venation patterning. Correlation with previous ampelography suggests an important genetic component, which we confirm with estimates of heritability. We further use RNA-Seq of mutant varieties and perform a Genome-Wide Association Study (GWAS) to explore the genetic basis of leaf shape. Meta-analysis reveals a relationship between leaf morphology and hirsuteness, traits known to correlate with climate in the fossil record and extant species. Together, our data demonstrate a genetic basis for the intricate diversity present in grape leaves. We discuss the possibility of using grape leaves as a breeding target to preserve terroir in the face of anticipated climate change, a major problem facing viticulture.
Data from: Intraspecific trait variation across multiple scales: the leaf economics spectrum in coffee
Understanding species differences in plant functional traits has been critical in developing a mechanistic understanding of terrestrial ecological processes. Greater attention is now being placed on understanding the extent, causes and consequences of intraspecific trait variation (ITV). ITV is especially important in governing ecological processes in cropping systems, where only a small number of species or genotypes exist in high abundances. However, it remains unclear if key principles of trait-based ecology – namely the leaf economics spectrum (LES) – also describe intraspecific variation in crop functional biology. There also remains a need to understand whether ITV within crops is random, or structured across environmental, management-related or biological levels of organization in agroecosystems. We employed a nested design field survey to evaluate ITV in leaf traits in coffee (Coffea arabica), one of the world's most widespread tropical crops. We evaluated ITV in eight physiological, morphological and chemical leaf traits, across five nested categorical levels (sites, management systems, spatial location, plant identity, branch identity). We compared patterns of LES trait covariation in coffee, to interspecific patterns observed across over 700 wild plant species. Patterns of bivariate and multivariate ITV in coffee were broadly consistent with, but considerably weaker than, interspecific patterns associated with the LES, indicating that crops may systematically diverge from global patterns of trait trade-offs observed in wild plants. Physiological traits varied most widely (coefficient of variation (cv) 42–107%), followed by morphological traits (cv = 15–38%) and chemical traits (cv = 3–11%). Physiological ITV was best explained by the site in which a coffee plant was growing (17–55% explained), while ITV for chemical traits was best explained by management treatments within sites (25–36%); morphological ITV was higher even at the individual tree level or branch level and remained largely unexplained. Our results support the hypothesis that artificial selection and high-resource agricultural environments lead crops to systematically deviate from patterns of leaf trait covariation observed across wild plants species. Coupled with an understanding of how different traits vary systematically across multiple levels of biological organization, these findings help integrate ITV into future analyses of agroecosystem structure and function.
Data from: Decoupled evolution of foliar freezing resistance, temperature-niche and morphological leaf traits in Chilean Myrceugenia
1. Phylogenetic conservatism of tolerance to freezing temperatures has been cited to explain the tendency of plant lineages to grow in similar climates. However there is little information about whether or not freezing resistance is conserved across phylogenies, and whether conservatism of physiological traits could explain conservatism of realized climatic niches. Here we compared the phylogenetical lability of realized climatic niche, foliar freezing resistance, and four morphological leaf traits that are generally considered adaptations to frost resistance in Chilean species of Myrceugenia, which grow in a wide range of habitats. 2. We estimated the predicted niche occupancy profiles with respect to minimum temperature (minT) of all species. We measured foliar freezing resistance (using chlorophyll fluorescence), leaf size, leaf mass per area (LMA), stomatal and trichome densities of ten individuals per species. Finally, we estimated phylogenetic signal and we performed independent contrast analyses among all variables. 3. We found that both foliar freezing resistance and minT were subject to a significant phylogenetic signal, but the former had a stronger signal. We also detected a significant but weak correlation between them (r=0.49, pone tail= 0.04). Morphological traits evolved independent of any phylogenetic effect. Synthesis. Our results show that freezing resistance evolved in association with temperature niche, but with some delay that could result from phylogenetic inertia. Our results also show that morphological leaf traits are more labile than realized climatic niche and frost tolerance and the former probably evolved associated to microhabitat preferences.
Data from: Altered leaf litter quality exacerbates the negative impact of climate change on decomposition
1.Leaf litter decomposition is a key component of global biogeochemical cycles that influences soil carbon storage, nutrient availability and plant productivity. Ongoing climate change will lead to warmer and drier conditions in many dryland regions, potentially affecting litter decomposition and nutrient dynamics. Climate change effects can be direct and/or indirect, e.g. through changes in litter quality, yet their relative importance on litter decomposition remains unclear. 2. We conducted a manipulative study in a semiarid shrubland to assess the effects of leaf litter quality, forecasted climate change, i.e. +2.5°C warming (W), 30% rainfall reduction (RR), as well as their interaction (W+RR) to elucidate their relative effects on litter decomposition. 3. Climatic effects alone reduced decomposition of a homogeneous control leaf litter collected from Helianthemum squamatum shrubs growing in unmanipulated plots by 23.4%, 18.1%, and 29.8% in the W, RR and W+RR treatments, respectively. Leaf litter quality was lower in shrubs that had been growing in warmed plots (W and W+RR), as they had lower nutrient concentrations (P, Fe) and higher C:N and C:P ratios than leaf litter produced under ambient (control) conditions. Lignin concentration was significantly lower in litter from W+RR plots, yet when both climate and litter quality were considered simultaneously, decomposition rates were 32.0%, 26.3% and 39.9% lower in W, RR and W+RR plots compared to controls. In addition, we found greater microbial N immobilization in leaf litter incubated within warmed (W and W+RR) than within non‐warmed plots (Control and RR). Structural equation modelling showed that higher litter moisture and microbial biomass contents stimulated decomposition. Simulated climate change (W, RR and W+RR) reduced decomposition indirectly by negatively affecting litter moisture contents and litter microbial biomass. Microbial nitrogen immobilization was stimulated by the lower quality (i.e. high C:N ratios) of the leaf litter collected in shrubs from warmed plots (W and W+RR). 4. Synthesis Our findings indicate that forecasted climate change conditions slow down C and N cycling in a dryland ecosystem, an effect that is further exacerbated by climate change‐induced reductions in litter quality and related reductions in bacterial and fungal biomass in litter.
Data from: Dry-season decline in tree sapflux is correlated with leaf turgor loss point in a tropical rainforest
1. Water availability is a key determinant of forest ecosystem function and tree species distributions. While droughts are increasing in frequency in many ecosystems, including in the tropics, plant responses to water supply vary with species and drought intensity, and are therefore difficult to model. Based on physiological first principles, we hypothesized that trees with a lower turgor loss point (πtlp), i.e., a more negative leaf water potential at wilting, would maintain water transport for longer into a dry season. 2. We measured sapflux density of 22 mature trees of 10 species during a dry season in an Amazonian rainforest, quantified sapflux decline as soil water content decreased, and tested its relationship to tree πtlp, size, and leaf predawn and midday water potentials measured after the onset of the dry season. 3. The measured trees varied strongly in the response of water use to the seasonal drought, with sapflux at the end of the dry season ranging from 37 to 117% (on average 83 ± 5 %) of that at the beginning of the dry season. The decline of water transport as soil dried was correlated with tree πtlp (Spearman ρ≥0.63), but not with tree size or predawn and midday water potentials. Thus, trees with more drought-tolerant leaves better maintained water transport during the seasonal drought. 4. Our study provides an explicit correlation between a trait, measurable at the leaf level, and whole-plant performance under drying conditions. Physiological traits such as πtlp can be used to assess and model higher-scale processes in response to drying conditions.
Data from: Leaf litter nutrient uptake in an intermittent blackwater river: influence of tree species and associated biotic and abiotic drivers
1. Organic matter may sequester nutrients as it decomposes, increasing in total N and P mass via multiple uptake pathways. During leaf litter decomposition, microbial biomass and accumulated inorganic materials immobilize and retain nutrients, and therefore, both biotic and abiotic drivers may influence detrital nutrient content. We examined the relative importance of these types of nutrient immobilization and compared patterns of nutrient retention in recalcitrant and labile leaf litter. 2. Leaf packs of water oak (Quercus nigra), red maple (Acer rubrum) and Ogeechee tupelo (Nyssa ogeche) were incubated for 431 days in an intermittent blackwater stream and periodically analysed for mass loss, nutrient and metal content, and microbial biomass. These data informed regression models explaining temporal changes in detrital nutrient content. Informal exploratory models compared estimated biologically associated nutrient stocks (fungal, bacterial, leaf tissue) to observed total detrital nutrient stocks. We predicted that (i) labile and recalcitrant leaf litter would act as sinks at different points in the breakdown process, (ii) plant and microbial biomass would not account for the entire mass of retained nutrients, and (iii) total N content would be more closely approximated than total P content solely from nutrients stored in leaf tissue and microbial biomass, due to stronger binding of P to inorganic matter. 3. Labile litter had higher nutrient concentrations throughout the study. However, lower mass loss of recalcitrant litter facilitated greater nutrient retention over longer incubations, suggesting that it may be an important long-term sink. N and P content were significantly related to both microbial biomass and metal content, with slightly stronger correlation with metal content over longer incubations. 4. Exploratory models demonstrated that a substantial portion of detrital nutrients was not accounted for by living or dead plant and microbial biomass, especially in the case of N. This suggests increased importance of both N and P sorption to inorganic matter over time, with possible additional storage of N complexed with lignin. A better understanding of the influence of these mechanisms may improve our understanding of detrital nutrient uptake, basal resource quality and retention and transport of nutrients in aquatic ecosystems.
Data from: Leafing intensity and the fruit size/number trade-off in woody angiosperms
A sample of woody angiosperm species was used to test a central prediction of the 'leafing intensity premium' hypothesis: higher leafing intensity (number of leaves produced per unit dry mass of shoot vegetative tissue produced in the same growing season) confers a larger bud bank (i.e. number of axillary meristems per unit shoot tissue) that can be deployed for reproduction, and thus confers generally greater fruit numbers, and hence higher potential fecundity allocation (i.e. fecundity per unit size of the supporting shoot tissue that is produced in the same growing season. Current-year shoots (i.e. bearing leaves) were collected to record: shoot dry mass, total number of leaves, total number of fruits or fruit clusters (if derived from inflorescences), mean individual leaf dry mass and mean individual fruit dry mass. Sampled individuals (shrubs and trees) were also measured for body size (main stem height and circumference). Species with larger individual fruit (or fruit cluster) mass have generally larger leaves, but they also have a negative trade-off relationship with 'fruiting intensity' – that is the total number of reproductive meristems producing fruits (or fruit clusters) per unit dry mass of shoot vegetative tissue produced in the same growing season. Variation in fruiting intensity, however, is better predicted by a positive relationship with variation in bud bank size. Species with smaller leaf size (dry mass) have generally higher leafing intensity; species with higher leafing intensity in turn have generally higher fruiting intensity; and species with higher fruiting intensity in turn have generally higher potential fecundity allocation (based on the typical species maximum number of seeds per fruit, obtained from published floras). Species with smaller body size have generally higher potential fecundity allocation, but body size had no significant relationships with other measured traits when controlling for phylogeny (using phylogenetically independent contrasts). Synthesis. Our results indicate that bud bank size is an important functional trait for defining adaptive strategy in woody angiosperms. A larger bud bank is generated by higher leafing intensity, which in turn generates higher fruiting intensity, thus generating greater potential fecundity allocation. These traits will be important for maximizing reproductive economy – that is capacity to produce offspring despite growth or body size limitation (e.g. due to crowding/competition, or because of limited time available for growth, flowering, pollination or fruit/seed maturation).
Data from: No evidence for larger leaf trait plasticity in ecological generalists compared to specialists
Aim: Phenotypic plasticity is hypothesized to contribute to a species' capacity to occupy broader ranges of conditions and to optimally exploit resource-rich environments. Although this is supported by case studies of individual species, we do not know whether larger plasticity in functional traits is generally associated with ecological characteristics of species such as their niche breadth or niche position. Here, we test whether there is such a relationship for plasticity in leaf functional traits. Location: Central Europe. Methods: We surveyed 110–132 grassland plant species for plasticity in five leaf traits [leaf thickness, leaf greenness, specific leaf area, leaf dry matter content (LDMC) and plant height] and for biomass changes in response to experimental fertilization, shading and waterlogging. Trait plasticity and changes in biomass were compared with species niche characteristics along three environmental axes (light, nutrient and soil moisture) derived from a vegetation-plot database. Results: Although response of several traits to experimental treatments correlated with niche position and breadth (change in leaf thickness, greenness and biomass in response to fertilization; change in LDMC due to shading; and change in plant height and biomass due to waterlogging), we did not find evidence that species with broader niches or species from resource-rich environments are more plastic. Ecological generalists even turned out to be less plastic in some traits, including leaf thickness after fertilization and waterlogging. Generalists also displayed smaller plastic response averaged across all five traits ('composite plasticity'), though the relationship was not statistically significant. This composite plasticity was positively related to absolute change in biomass in all experimental treatments. Main conclusions: Our results suggest that larger species-level plasticity in leaf traits is not necessarily associated with a capacity to occupy a broader range of environments or with growth in resource-rich habitats; rather, it may indicate species' sensitivity to environmental changes.
Data from: A molecular phylogeny and revised higher-level classification for the leaf-mining moth family Gracillariidae and its implications for larval host-use evolution
Gracillariidae are one of the most diverse families of internally feeding insects, and many species are economically important. Study of this family has been hampered by lack of a robust and comprehensive phylogeny. In the present paper, we sequenced up to 22 genes in 96 gracillariid species, representing all previously recognized subfamilies and genus groups, plus 20 outgroups representing other families and superfamilies. Following objective identification and removal of two rogue taxa, two datasets were constructed: dataset 1, which included 12 loci totalling 9927 bp for 94 taxa, and dataset 2, which supplemented dataset 1 with 10 additional loci for 10 taxa, for a total of 22 loci and 16 167 bp. Maximum likelihood analyses strongly supported the monophyly of Gracillariidae and most previously recognized subfamilies and genus groups. On this basis, we propose a new classification consisting of eight subfamilies, four of which are newly recognized or resurrected: Acrocercopinae Kawahara & Ohshima subfam. n.; Gracillariinae Stainton; Lithocolletinae Stainton; Marmarinae Kawahara & Ohshima subfam. n.; Oecophyllembiinae Réal & Balachowsky; Parornichinae Kawahara & Ohshima subfam. n.; Ornixolinae Kuznetzov & Baryshnikova stat. rev.; and Phyllocnistinae Zeller. The subfamily Gracillariinae is restricted to the monophyletic group comprising Gracillaria Haworth and closely related genera. We also formally transfer Acrocercops scriptulata Meyrick to Ornixolinae and use the name Diphtheroptila Vári, creating Diphtheroptila scriptulata comb. n. An exploratory mapping of larval host-use traits on the phylogeny shows strong conservation of modes of leaf mining but much higher lability of associations with host plant orders and families, suggesting that host shifts could play a significant role in gracillariid diversification.
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.