Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
1,411
datasets available to search
ShareScore release 0.9.0
Dataset results
1,411 results for “Cell States”
Single-cell analysis of bidirectional reprogramming between early embryonic states reveals mechanisms of differential lineage plasticities [scATAC-seq]
GEO Series GSE276702. Mus musculus. 12 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Two Distinct Sertoli Cell States are Regulated via Germ Cell Crosstalk [scRNA-seq]
GEO Series GSE166563. Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.
Critical role for a high-plasticity cell state in lung cancer
GEO Series GSE277777. Mus musculus. 32 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide expression microarray analysis of seminoma-like TCam-2 cells during transition into an embryonal carcinoma-like state
GEO Series GSE60698. Homo sapiens. 12 samples. Type: Expression profiling by array.
SetDB1 Contributes to Repression of Genes Encoding Developmental Regulators and Maintenance of ES Cell State
GEO Series GSE18371. Mus musculus. 11 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Protein Kinase Cι dictates tumor trajectory, cell state plasticity and immune surveillance in lung adenocarcinoma
GEO Series GSE300862. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Transcription factor TCF1 binds Rorgt and orchestrates a regulatory network that determines homeostatic Th17 cell state [RNA-seq]
GEO Series GSE233907. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Role of Mcam in breast cancer cell state using a model cell line (Py230) [bulk RNA-Seq]
GEO Series GSE233090. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Transcriptome analysis of Bcl11b-deficient MAIT cells at steady state and infection
GEO Series GSE145778. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
PD-1 defines a distinct, functional, tissue-adapted state in Vδ1+ T cells with implications for cancer immunotherapy
GEO Series GSE232529. Homo sapiens. 31 samples. Type: Other.
Multi-omic analysis by single-cell sequencing of epigenomic state in pediatric H3K27M gliomas
GEO Series GSE210568. Homo sapiens. 61 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Single-nuclear transcriptomics reveals a diversity of proximal tubule cell states in a dynamic response to acute kidney injury.
GEO Series GSE171417. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing.
KAP1/TRIM28 maintains the transcriptional state of cancer cells
GEO Series GSE132705. Homo sapiens. 67 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
RISC-mediated control of selected chromatin regulators stabilizes ground state pluripotency of mouse embryonic stem cells (RNAi)
GEO Series GSE79652. Mus musculus. 5 samples. Type: Expression profiling by array.
Oncogenic MAPK signalling induces epithelial cell state change and therapeutic resistance in vivo [scRNA-Seq]
GEO Series GSE307774. Mus musculus. 29 samples. Type: Expression profiling by high throughput sequencing.
TET-deficient knockout cells transit between pluripotent states and exhibit precocious germ cell differentiation
GEO Series GSE273732. Mus musculus. 18 samples. Type: Expression profiling by high throughput sequencing.
Enhancer grammar of liver cell types and hepatocyte zonation states [FACS_ATAC]
GEO Series GSE218469. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
OTX2 inhibits human pluripotent stem cell reprogramming toward 8-cell-like and morula-like states
GEO Series GSE299199. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Single-cell epigenetic, transcriptional, protein, and TCR states of HIV-1-infected cells in gut
GEO Series GSE299348. Homo sapiens. 117 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Deletion of a state-specific PD-1 enhancer modulates exhausted T cell fate and function [ATAC-seq]
GEO Series GSE212506. Mus musculus. 12 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.