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Long term responses of first order streams to allochthonous and detrital manipulations at the Coweeta Hydrologic Laboratory, Otto, NC from 1984 to 2006
This dataset examines the long term effects of litter exclusion, small and large wood removal, and the addition of leaf species of varying detrital quality on organic matter standing crop, export of organic and inorganic particles, and invertebrate abundance and biomass in a high-gradient headwater stream. Pre-treatment and stream reference data are also included. This study was conducted at the Coweeta Hydrologic Laboratory watersheds 53, 54, and 55 from years 1988 through 2006.
Throw trap and electrofishing data collected during 1996–2022 from the Everglades, Florida, United States for the publication "Contrasting invasion histories and effects of three non-native fishes observed with long-term monitoring data"
This dataset was used to analyze the effects of three non-native fishes in the Florida Everglades for a publication in the journal Biological Invasions. The dataset incorporates plot-level mean densities (# of individuals per square meter) of common aquatic animals collected during 1996–2022 from 17 sites across three regions of the Everglades: Taylor Slough, Shark River Slough, and Water Conservation Area 3A. Prey species included are nine common small fishes and three common decapod species (two crayfish species and grass shrimp). The dataset includes throw trap data on three predator taxa: African Jewelfish (Hemichromis letourneuxi), Mayan Cichlids (Mayaheros uruphthalmus), and sunfishes (Lepomis spp.). Annual indices of mean wet season electrofishing catch-per-unit-effort of Asian Swamp Eels (Monopterus albus/javanesis), Mayan Cichlids, sunfishes, and the three other large 'top predator' fishes (Amia calva, Lepisosteus platyrhincus, Micropterus salmoides) are included for plots where electrofishing was performed from 1997-2021. Hydrologic measures used in analyses and R code used to conduct analyses are also included.
Long-Term Slough Crayfish (Procambarus fallax) Densities in the Florida Everglades from Throw Trap Sampling, Florida, USA, February 1996-December 2016
Densities of slough crayfish (Procambarus fallax) were collected throughout the Florida Everglades using 1-m2 throw-trapping samples from 1996–2016. Data were collected in four distinct regions within the Everglades (Shark River Slough, Taylor Slough, Water Conservation Area 3A and 3B) and during five seasonal periods each year. Each region consists of a series of sites, and each site consists of 3–5 sampling plots. The plot scale defines the unique sampling unit in the study, and 5–7 replicate throws were conducted at each plot. Corresponding hydrologic data were collected in conjunction with crayfish observations. These data describe antecedent average water depths, along with the duration of previous wet and dry conditions. Antecedent conditions were calculated by using both in situ measurements, as well as model output from the Everglades Depth Estimation Network (EDEN). Additional hydrologic data are provided in the LD_0 dataset, which describes daily depths measurements at sampling plots, as well as the length of antecedent complete drying events (LD_0). The length of antecedent dry conditions is assessed in R script FCE1267_01_LD_Depths, while the crayfish modeling code is described in FCE1267_02_Modeling_Code.
Vegetation cover data from line-intercept transects in the long-term Small Mammal Exclusion Study (SMES) at Jornada Basin LTER, 1995-2005
This package contains perennial vegetation cover data measured using the line-intercept method from plots with various levels of herbivore exclusion on Jornada Experimental Range (JER) and Chihuahuan Desert Rangeland Research Center (CDRRC) lands. Study sites were established in 1995; one in black grama grassland and the other in creosotebush shrubland to compare the impact of herbivores on ecosystem processes between these vegetation types. Parallel studies were established at the Sevilleta LTER site (New Mexico, USA) and Mapimi Biosphere Reserve (Durango, Mexico). Each study site is 1 km by 0.5 km in area. Four replicate experimental blocks were randomly located at the grassland study site to measure vegetation responses using exclusion treatments including a) all mammalian herbivores, including cattle, lagomorphs, and rodents, b) lagomorphs and cattle only, c) cattle only, and d) control accessible to all herbivores. Because grazing cattle are excluded from the entire creosote site, only three replicate experimental blocks were randomly located there including a) all mammalian herbivores, including lagomorphs, and rodents, b) lagomorphs only, and c) control accessible to all herbivores. Thirty-six sampling points were positioned at 5.8-meter intervals on a systematically located 6 by 6 point grid within each plot. A permanent one-meter by one-meter vegetation measurement quadrat is located at each of the 36 points. The vegetation line-intercept measurements in this data package were made in fall 1995 and fall 2005 to coincide with low-level aerial photography campaigns. Three 29-meter lines were measured along three out of six rows of permanent vegetation quadrats. Intercept locations for live, perennial plant cover and bare ground were measured along each line at 10cm resolution, which is comparable to the resolution of the aerial photos. Plants were identified to species level where possible. The resulting cover data can used to ground-truth cover estimates fro
Cryptogam crust data from the long-term Small Mammal Exclosure Study (SMES) at Jornada Basin LTER, 1995-2005
This data package contains cryptogam cover data from plots with various levels of herbivore exclusion on Jornada Experimental Range (JER) and Chihuahuan Desert Rangeland Research Center (CDRRC) lands. Study sites were established in 1995; one in black grama grassland and the other in creosotebush shrubland to compare the impact of herbivores on ecosystem processes between these vegetation types. Parallel studies were established at the Sevilleta LTER site (New Mexico, USA) and Mapimi Biosphere Reserve (Durango, Mexico). Each study site is 1 km by 0.5 km in area. Four replicate experimental blocks were randomly located at each study site to measure vegetation responses using exclusion treatments including a) all mammalian herbivores, including cattle, lagomorphs, and rodents, b) lagomorphs and cattle only, c) cattle only, and d) control accessible to all herbivores. Thirty-six sampling points were positioned at 5.8-meter intervals on a systematically located 6 by 6 point grid within each plot. A permanent one-meter by one-meter vegetation measurement quadrat is located at each of the 36 points. Each year in spring and fall from 1995-2005, the percent of a quadrat covered in cryptogams was estimated by summing the percent of each 10 cm square within a quadrat (including 100 10-cm squares) containing cryptogams (See methods for a detailed explanation). Cryptogams (biological soil crusts) include lichens, algae, cyanobacteria, and moss. This study is complete.
Termite casing data from the long-term Small Mammal Exclosure Study (SMES) at Jornada Basin LTER, 1995-2005
This data package contains termite activity data in plots with a range of herbivore exclusion treatments on Jornada Experimental Range (JER) and Chihuahuan Desert Rangeland Research Center (CDRRC) lands. Study sites were established in 1995; one in black grama grassland and the other in creosotebush shrubland to compare the impact of herbivores on ecosystem processes between these vegetation types. Parallel studies were established at the Sevilleta LTER site (New Mexico, USA) and Mapimi Biosphere Reserve (Durango, Mexico). Each study site is 1 km by 0.5 km in area. Four replicate experimental blocks were randomly located at each study site to measure vegetation responses using exclusion treatments including a) all mammalian herbivores, including cattle, lagomorphs, and rodents, b) lagomorphs and cattle only, c) cattle only, and d) control accessible to all herbivores. Thirty-six sampling points were positioned at 5.8-meter intervals on a systematically located 6 by 6 point grid within each plot. A permanent one-meter by one-meter vegetation measurement quadrat is located at each of the 36 points. Each spring and fall from 1995-2005, a tape measure was used to measure the length, diameter, and height in centimeters of each termite casing in these vegetation quadrats. This study is complete.
Rodent data from trapping webs in the long-term Small Mammal Exclusion Study (SMES) at Jornada Basin LTER, 1995-2007
This data package contains rodent trapping data from plots with various levels of herbivore exclusion on the Jornada Experimental Range (JER) and Chihuahuan Desert Rangeland Research Center (CDRRC) lands. Study sites were established in 1995; one in black grama grassland and the other in creosotebush shrubland to compare the impact of herbivores on ecosystem processes between these vegetation types. Parallel studies were established at the Sevilleta LTER site (New Mexico, USA) and Mapimi Biosphere Reserve (Durango, Mexico). Each study site is 1 km by 0.5 km in area. Three replicate rodent trapping webs and four replicate experimental blocks were randomly located at each study site. Rodent trapping webs were used to measure rodent population density and species diversity over time, while the experimental blocks measure vegetation responses to herbivore exclusion treatments including a) all mammalian herbivores, including cattle, lagomorphs, and rodents, b) lagomorphs and cattle only, c) cattle only, and d) control accessible to all herbivores. Rodent populations were sampled from each of the three webs at each study site during overnight trapping campaigns twice per year, in the early (April-May) and late (September-October) summer between 1995 and 2007 (trapping study terminated after October 2007). During each trapping campaign, live-traps were left open for three consecutive nights, and captured animals were recorded on the three subsequent mornings. Each animal caught was identified, measured, and released at the same location where it was captured. This study is complete.
WSI01 Long-term water (stream, groundwater, precipitation) stable isotope records at Konza Prairie
Long-term oxygen and hydrogen stable isotope (δ18O and δ2H) records for precipitation, stream water, and groundwater at Konza Prairie Biological Station.
Sonadora elevational plots: long-term monitoring of air temperature
This is a long term monitoring of air temperature at each elevation plot along the Sonadora gradient. At each plot a HOBO sensor is located close to the middle of the plot: at 1m above ground: and placed inside a radiation shield (a plastic cup). Sensors are programmed to sample and store air temperature every hour. A daily average is computed from hourly readings. Sensors are downloaded twice a year: thus blanks represent sensor malfunction: loss of battery: or memory full. Initial blanks were due to lack of enough sensors to cover the gradient. Support for this work was provided by grants BSR-8811902, DEB-9411973, DEB-9705814 , DEB-0080538, DEB-0218039 , DEB-0620910 , DEB-1239764, DEB-1546686, and DEB-1831952 from the National Science Foundation to the University of Puerto Rico as part of the Luquillo Long-Term Ecological Research Program. Additional support provided by the University of Puerto Rico and the International Institute of Tropical Forestry, USDA Forest Service.
Long-term Intersite Decomposition Experiment (LIDET)
LIDET is the LTER Longterm Intersite Decomposition Experiment Team. It is a leaf, wood, and root decomposition study carried out at 28 LTER and other sites including LUQ. The duration of the study is designed to be approximately 10 yrs at temperate zone sites and approximately 3 yrs at tropical zone sites because of higher decomposition rates there. The same decomposing materials, litter bags, and study design are used at all sites to facilitate intersite comparisons. Not all species were used at all sites. Six leaf litter species were used extensively at all sites that cover a range of leaf quality to permit a comparison of effects of litter quality and climate on decomposition. The others were present in the study as "wild cards", with at least one species contributed by each site. Three species of roots, and one species of wood were used. Support for this work was provided by grants BSR-8811902, DEB-9411973, DEB-9705814 , DEB-0080538, DEB-0218039 , DEB-0620910 , DEB-1239764, DEB-1546686, and DEB-1831952 from the National Science Foundation to the University of Puerto Rico as part of the Luquillo Long-Term Ecological Research Program. Additional support provided by the University of Puerto Rico and the International Institute of Tropical Forestry, USDA Forest Service.
Long-term fish abundance data for Wisconsin Lakes Department of Natural Resources and North Temperate Lakes LTER 1944 - 2012 (Reformatted to a Darwin Core Archive)
This data package is formatted as a Darwin Core Archive (DwC-A, event core). For more information on Darwin Core see https://www.tdwg.org/standards/dwc/. This Level 2 data package was derived from the Level 1 data package found here: https://pasta.lternet.edu/package/metadata/eml/knb-lter-ntl/346/6, which was derived from the Level 0 data package found here: https://pasta.lternet.edu/package/metadata/eml/knb-lter-ntl/356/3. The abstract below was extracted from the Level 0 data package and is included for context: This dataset describes long-term (1944-2012) variations in the relative abundance of fish populations representing nine species in Wisconsin lakes. Data were collected by Wisconsin Department of Natural Resource fisheries biologists as part of routine lake fisheries assessments. Individual survey methodologies varied over space and time and are described in more detail by Rypel, A. et al., 2016. Seventy-Year Retrospective on Size-Structure Changes in the Recreational Fisheries of Wisconsin. Fisheries, 41, pp.230-243. Available at: http://afs.tandfonline.com/doi/abs/10.1080/03632415.2016.1160894
Macroinfaunal counts, 2003-2020, from marsh cores along Rowley River tidal creeks associated with long term fertilization experiments, Rowley, MA.
Macroinfaunal counts, 2003-2006, 2007, 2009, 2012--2020 from marsh cores along Rowley River tidal creeks associated with long term fertilization experiments, Rowley, MA. The long term fertilization experiment, TIDE project, aims to simulate eutrophication on a large scale by the addition of NO3- aiming to reach 70μM concentrations from May to September every year during the growing season. This fertilization of the marsh has been going on at Sweeney Creek since the 2004 growing season and at Clubhead Creek in 2005 and then from 2009 till 2016. Fertilization stopped in 2016.
Snail, Melampus bidentatus, length and biomass measurements for Rowley River tidal creeks associated with long term fertilization experiments, Rowley and Ipswich, MA.
Melampus bidentatus (coffee bean snail) length and biomass measurements for Rowley River tidal creeks associated with long term fertilization experiments, Rowley and Ipswich, MA. The TIDE project aims to simulate eutrophication on a large scale by the addition of NO3- aiming to reach 70μM concentrations from May to September every year during the growing season. This fertilization of the marsh has been going on at Sweeney Creek since the 2004 growing season through 2016 and at Clubhead Creek in 2005 and from 2009 till 2016. Invertebrates were sampled after fertilization ended to look at recovery.
Marsh plant species percent cover for Rowley River tidal creeks associated with long term fertilization experiments, Rowley and Ipswich, MA.
Marsh plant species percent cover for Rowley River tidal creeks associated with long term fertilization experiments, Rowley and Ipswich, MA. The TIDE project aims to simulate eutrophication on a large scale by the addition of NO3- aiming to reach 70µM concentrations from May to September every year during the growing season. This fertilization of the marsh has been going on at Sweeney Creek since the 2004 growing season through 2011 and at Clubhead Creek in 2005 and from 2009 till 2011.
Marsh plant species C:H:N data for Rowley River tidal creeks associated with long term fertilization experiments, Rowley and Ipswich, MA.
Marsh plant species C:H:N data for Rowley River tidal creeks associated with long term fertilization experiments, Rowley and Ipswich, MA. The TIDE project aims to simulate eutrophication on a large scale by the addition of NO3- aiming to reach 70µM concentrations from May to September every year during the growing season. This fertilization of the marsh has been going on at Sweeney Creek since the 2004 growing season through 2011 and at Clubhead Creek in 2005 and from 2009 till 2011.
Marsh plant species frequency of occurrence along marsh transects for Rowley River tidal creeks associated with long term fertilization experiments, Rowley and Ipswich, MA.
Marsh plant species frequency of occurrence along marsh transects for Rowley River tidal creeks associated with long term fertilization experiments, Rowley and Ipswich, MA. The TIDE project aims to simulate eutrophication on a large scale by the addition of NO3- aiming to reach 70µM concentrations from May to September every year during the growing season. This fertilization of the marsh has been going on at Sweeney Creek since the 2004 growing season through 2011 and at Clubhead Creek in 2005 and from 2009 till 2011.
Marsh plant species stem counts for Rowley River tidal creeks associated with long term fertilization experiments, Rowley and Ipswich, MA.
Marsh plant species stem counts for Rowley River tidal creeks associated with long term fertilization experiments, Rowley and Ipswich, MA. The TIDE project aims to simulate eutrophication on a large scale by the addition of NO3- aiming to reach 70µM concentrations from May to September every year during the growing season. This fertilization of the marsh has been going on at Sweeney Creek since the 2004 growing season through 2012 and at Clubhead Creek in 2005 and from 2009 till 2012. The reference creeks, West and Nelson, have been sampled in pair with the nutrient enriched creeks.
Creek morphology in Rowley River tidal creeks associated with long term fertilization experiments, Rowley and Ipswich, MA.
The length and number of creek fractures in the high marsh turf near the low marsh/high marsh border were measured in Rowley River tidal creeks associated with long term fertilization experiments, Rowley and Ipswich, MA. The TIDE project aims to simulate eutrophication on a large scale by the addition of NO3- aiming to reach 70µM concentrations from May to September every year during the growing season. This fertilization of the marsh has been going on at Sweeney Creek since the 2004 growing season through 2012 and at Clubhead Creek in 2005 and from 2009 till 2012
High-marsh invertebrate densities for Rowley River tidal creeks associated with long term fertilization experiments, Rowley and Ipswich, MA.
Density (individuals per m2) of epibenthic invertebrate (on the surface such as snails and amphipods) for Rowley River tidal creeks associated with long term fertilization experiments, Rowley and Ipswich, MA. The TIDE project aims to simulate eutrophication on a large scale by the addition of NO3- aiming to reach 70μM concentrations from May to September every year during the growing season. Marsh fertilization from 2004 - 2016 at Sweeney Creek and 2005, and 2009-2016 at Clubhead Creek. Nutrient enrichment ended in 2016.
SBC LTER: Long-term experiment: Kelp Removal: Transect depth data
These data summarize depth information (mean, standard deviation and coefficient of variation) for all of the transects surveyed as part of the SBC LTER Long Term Kelp Removal Experiment. All data are expressed in meters, referenced to mean lower low water (MLLW). Each value is the result of 160 observations, four at each meter (n=160). The sampling locations in this dataset are 40 meter transects at four reef sites along the mainland coast of the Santa Barbara Channel, California, USA. These data were recorded in 2010.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.