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641
datasets available to search
ShareScore release 0.9.0
Dataset results
641 results for “Protein interaction”
Dual-mode modulation of Smad signaling by Smad-interacting protein Sip1 is required for myelination in the central nervous system
GEO Series GSE40431. Mus musculus; Rattus norvegicus. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by array.
Oligonucleotide-directed proximity-interactome mapping (O-MAP): A unified method for discovering RNA-interacting proteins, transcripts and genomic loci in situ [Xist OMAP ChIP]
GEO Series GSE217564. Mus musculus x Mus spretus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Post-transcriptional regulation of cell-cell interaction protein-encoding transcripts by Zfs1p in S. pombe
GEO Series GSE35009. Schizosaccharomyces pombe; Saccharomyces cerevisiae. 28 samples. Type: Expression profiling by array.
An interaction with Ewing's sarcoma breakpoint protein EWS defines the specific oncogenic mechanism of ETS factors rearranged in prostate cancer
GEO Series GSE81493. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
Temporal iCLIP captures co-transcriptional RNA-protein interactions
GEO Series GSE202980. Homo sapiens. 105 samples. Type: Expression profiling by high throughput sequencing.
Mediator binds to boundaries of chromosomally interacting domains and to proteins involved in DNA looping
GEO Series GSE95051. Saccharomyces cerevisiae. 16 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
APEX-seq Captures the Protein-RNA Interaction Patterns of DDX3X and DDX3Y
GEO Series GSE171792. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Viral-mediated ubiquitination impacts interactions of host proteins with viral RNA and promotes viral RNA processing
GEO Series GSE145411. Homo sapiens. 9 samples. Type: Other.
New Drosophila promoter-associated architectural protein Mzfp1 interacts with CP190 and is required for housekeeping gene expression and insulator activity [RNA-seq]
GEO Series GSE242679. Drosophila melanogaster. 5 samples. Type: Expression profiling by high throughput sequencing.
Transcriptome-wide mapping of RNA:protein interactions of Arid5a in mouse P19 cells.
GEO Series GSE254818. Mus musculus. 3 samples. Type: Other.
Protocol for Mapping Protein-DNA Interactions with Directed Methylation with Long-read Sequecing (DiMeLo-seq)
GEO Series GSE208125. Homo sapiens; Drosophila melanogaster. 4 samples. Type: Other.
NanoTag - an IgG-free method for mapping DNA-protein interactions
GEO Series GSE302691. Mus musculus. 14 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
The Global Protein-RNA Interaction map of Epithelial Splicing Regulatory Protein 1 defines a post-transcriptional program that is essential for epithelial cell function
GEO Series GSE212307. Mus musculus. 20 samples. Type: Expression profiling by high throughput sequencing; Other.
Transcriptome-wide mapping of RNA:protein interactions of three SR proteins in HeLa cells
GEO Series GSE113814. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing; Other; Non-coding RNA profiling by high throughput sequencing.
Next Generation Sequencing analysis of Functional Interactions among Insulator Proteins [CP190 ChIP-Seq]
GEO Series GSE52886. Drosophila melanogaster. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Next Generation Sequencing analysis of Functional Interactions among Insulator Proteins
GEO Series GSE52887. Drosophila melanogaster. 14 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Inactivation of the nuclear interacting SET domain protein 1 (NSD1) impairs GATA1-regulated erythroid differentiation and causes erythroleukemia.
GEO Series GSE136811. Mus musculus. 62 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
DMS-seq for in vivo genome-wide mapping of protein–DNA interactions and nucleosome centers
GEO Series GSE92973. Saccharomyces cerevisiae. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Next Generation Sequencing analysis of Functional Interactions among Insulator Proteins [Beaf-32 ChIP-seq]
GEO Series GSE52962. Drosophila melanogaster. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
A systematic analysis of Trypanosoma brucei chromatin factors identifies novel protein interaction networks associated with sites of transcription initiation and termination
GEO Series GSE150253. Trypanosoma brucei brucei. 288 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.