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Dataset results
608 results for “ensembles”
dm6 (ensembl release 94) indices needed by snakePipes 2.2.0 and later versions
<p>Fruit fly indices for snakePipes from Ensembl release 94.</p>
A large ensemble of spatially and annually averaged CESM CAM 100-year data
This repository contains data from an ensemble of 100-year runs on the Cheyenne computer at NCAR. The purpose of this data set is to allow an investigation of how different variables are affected by software and hardware modifications at different time scales. The data was produced by a CESM 1.3 series tag using the CAM5 model version described in Kay et al. (2015). The simulations are CESM startup runs using a present-day F compset (active atmosphere and land, data ocean, and prescribed ice concentration), CAM5 physics at approximately 1 degree latitude/longitude resolution, and the spectral element dynamical core. The output contains CAM data from 147 simulations each with a 100-year time series (100 time points) of 134 variables. Of the 147 runs, 139 are control runs that differ only by an order double precision perturbation to the initial temperature, where 114 were from an Intel compilation and 25 from a GNU compilation. The remaining 8 runs are so-called test runs, each with a single modification (e.g., single parameter, compiler, minor code change) changed relative to the control runs. The simulations originally output monthly data. The modestly sized dataset released here is a result of annually averaging the monthly files, and then spatially averaging the annual averages over the grid. Each of the 147 NetCDF files corresponding to a single simulation contains the variable names and a matrix of 100 years of annual averages for each variable.
Data and Codes for Kim et al. "Discovering the Multisectoral Impacts of the Global Energy Sector Outcomes through Diverse Cross-ensemble Aggregation Measures"
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GP ensemble of neutron star equations of state
<p>GP ensemble of neutron star equations of state used in arXiv:2303.11356</p>
Data for Development and Evaluation of a North America Ensemble Wildfire Air Quality Forecast: Initial Application to the 2020 Western United States "Gigafire"
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Dataset for manuscript: Boosting ensemble refinement with transferable force field corrections: synergistic optimization for molecular simulations
<p>See https://github.com/bussilab/force-field-ensemble-refinement for analysis scripts</p>
Dispersal patterns and potential distribution prediction of three rice planthopper species in China based on the ensemble model
<p>Emergence of three rice planthopper species in China from 1993 to 2022.</p>
Exploring Conformational Landscapes and Binding Mechanisms of Convergent Evolition for the SARS-CoV-2 Spike Omicron Variant Complexes with the ACE2 Receptor Using AlphaFold2-Based Structural Ensembles and Molecular Dynamics Simulations
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Supplementary Data for "Predicting Thermodynamic Stability of Inorganic Compounds Using Ensemble Machine Learning Based on Electron Configuration"
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WACCM-X Constant Solar Simulations - Ensemble Mean
<p>Output from free-running Whole Atmosphere Community Climate Model with thermosphere-ionosphere eXtension (WACCM-X) simulations. Results are based on the mean of a 10-member ensemble of simulations performed using fixed solar and geomagnetic activity values of F10.7=70 solar flux units and Kp=0+.</p>
Data for the manuscript: Estimating aerosol emission from SPEXone on the NASA PACE mission using an ensemble Kalman Smoother: Observing System Simulation Experiments (OSSEs)
<p>Data for the manuscript: "Estimating aerosol emission from SPEXone on the NASA PACE mission using an ensemble Kalman Smoother: Observing System Simulation Experiments (OSSEs)" at Geoscientific Model Development.</p> <p>The file "Experiments.tar" contains all the ECHAM-HAM simulations. Each experiment has an ensemble mean (ensmean) and an ensemble standard deviation (ensstd) file. The "NatureRuns.tar" contains the Nature Runs used in this study. The file "SPEXone.tar" contains all the SPEXone related data used in this study.</p>
Output data and namelist - README file of "Evolution of squall line variability and error growth in an ensemble of LES'
<p>See README.txt</p>
Ensembl r88 Solanum Lycopersicum LinkSets
<p>Ensembl Solanum Lycopersicum LinkSets</p> <p>Gene - Transcript - Protein</p>
Ensembl r88 Sus Scrofa LinkSets
<p>Ensembl Sus Scrofa LinkSets</p> <p>Gene - Transcript - Protein</p>
Ensembl r88 Saccharomyces Cerevisia LinkSets
<p>Ensembl Saccharomyces Cerevisia LinkSets</p> <p>Gene - Transcript - Protein</p>
Atomistic Predictions and Network-Based Allosteric Analysis of Conformational Ensembles for the State-Switching ABL Kinase Mutants Using Combination of Alanine Sequence Scanning and Shallow Subsampling in AlphaFold2
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HadOM3 flux anomaly ensemble
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Enhancing Streamflow Prediction through Multi-model Ensemble Framework and Machine Learning Techniques
<p>This file contains python code used in this study and data used to plot figures. </p>
Dentate gyrus ensembles gate context-dependent neural states and memory retrieval
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AlphaFold2 Modeling and Molecular Dynamics Simulations of the Conformational Ensembles for the SARS-CoV-2 Spike Omicron JN.1, KP.2 and KP.3 Variants : Mutational Profiling of Binding Energetics Reveals Epistatic Drivers of the ACE2 Affinity and Escape Hotspots of Antibody Resistance
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ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.