Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
1,751
datasets available to search
ShareScore release 0.7.1
Dataset results
1,751 results for “molecular phylogenetics”
FIGURE 2. A. Bayesian 50 in Molecular phylogenetics of Sorocea (Moraceae)
FIGURE 2. A. Bayesian 50% majority rule consensus phylogenetic tree for Sorocea based on the trnL-F marker. B. Bayesian tree for Sorocea based on combined nuclear markers (ITS 4-5 and FA16180b). The numbers above the branches indicate support (maximum parsimony bootstrap, maximum likelihood bootstrap and Bayesian posterior probability). The initials of the collector's name and number are next to each species name.
FIGURE 2 in Molecular phylogenetic analysis of spiny eels (Mastacembelidae: Mastacembelus) from the Rokel River basin and adjacent areas of Sierra Leone, West Africa
FIGURE 2. Phylogeny of species of Mastacembelus inferred from partial cytochrome b. Branch support for each node is shown from Bayesian Inference (BI)/maximum likelihood (ML), illustrating the M. liberiensis (1 & 2): LT (Lake Tanganyika); LCR/CB (Lower Congo Region/Congo Basin); UG (Upper Guinean Province); LG (Lower Guinean Province) taxa and Asia populations.
Figure 3. Phylogenetic interrelationships among 31 in Molecular phylogeny supports invalidation of Didelphodiplostomum and Pharyngostomoides (Digenea: Diplostomidae) and reveals a Tylodelphys from mammals
Figure 3. Phylogenetic interrelationships among 31 sequences from members of Alaria (syn. Pharyngostomoides) based on BI analysis of partial cox1 mtDNA gene sequences. BI posterior probability values lower than 80% are not shown. The new sequences generated in this study are indicated in bold. The scale bar indicates the number of substitutions per site. The information on biogeographical realms and families of definitive hosts is provided only for taxa confirmed with sequence data. Abbreviations of biogeographical realms: N, Nearctic; P, Palaearctic. Abbreviations of family of definitive host: Can, Canidae; Fel, Felidae; Mep, Mephitidae; Mus, Mustelidae; Pro, Procyonidae. ‡ All collected specimens are immature. § Previously identified as A. americana by Locke et al. (2018).
Figure 1. Phylogenetic interrelationships among 54 in Molecular phylogeny supports invalidation of Didelphodiplostomum and Pharyngostomoides (Digenea: Diplostomidae) and reveals a Tylodelphys from mammals
Figure 1. Phylogenetic interrelationships among 54 diplostomoidean taxa based on BI analysis of partial 28S rDNA gene sequences including Didelphodiplostomum and Pharyngostomoides spp. BI posterior probability values lower than 80% are not shown. The new sequences generated in this study are indicated in bold. The scale bar indicates the number of substitutions per site.
FIGURE 19 in Morphology, molecular phylogenetics, and DNA barcoding revealed a new unusual species of the aphid genus Pleotrichophorus from the USA (Insecta, Hemiptera Aphididae)
FIGURE 19. Maximum-likelihood bootstrap consensus tree of Macrosiphini taxa. Pleotrichophorus samples new to this study are highlighted by the peach-colored box. Capitophorus species are highlighted by the blue box. The misidentified specimen of Pleotrichophorus glandulosus specimen reported by Choi et al. (2018) was recovered in a clade along with members of the genus Capitophorus. Support values from left to right are ML ultrafast bootstrap (>95; blue dot), standard non-parametric ML bootstrap (>75; red dot), and MP ultrafast bootstrap (>95; green dot). Nodes without labeled support values indicate that the support value was not significant for that analysis or was not recovered by that analysis.
FIGURE 18. K2P in Morphology, molecular phylogenetics, and DNA barcoding revealed a new unusual species of the aphid genus Pleotrichophorus from the USA (Insecta, Hemiptera Aphididae)
FIGURE 18. K2P neighbor-joining tree of Capitophorus and Pleotrichophorus COI barcodes with auto-collapsed clades with 0.005> average branch length. Collapsed terminal clusters are indicated by red, green, blue, or orange circles. Bootstrap values higher than 80% are indicated on branches with gray circles. Capitophorus species are indicated by blue branches. Pleotrichophorus glandulosus sensu Choi et al. 2018 and Capitophorus sp. from South Korea, China, and California are indicated in orange. Pleotrichophorus species are indicated by red branches. Pleotrichophorus blackmani sp. n., is indicated in green. COI barcodes identified as Pleotrichophorus glandulosus, P. pseudoglandulosus, and P. sp. from France, Russian Far East, and Eastern Canada are indicated in purple.
FIGURE 15 in Morphology, molecular phylogenetics, and DNA barcoding revealed a new unusual species of the aphid genus Pleotrichophorus from the USA (Insecta, Hemiptera Aphididae)
FIGURE 15. SEM of Pleotrichophorus glandulosus (Kaltenbach, 1846): head and body surface: (a) head and pronotum; (b) head trichoid sensilla; (c) trichoid sensilla of abdomen; (d) structure of the sensillum; (e) ultrastructure of the trichoid sensillum socket; (f, g) ultrastructure of the apices of trichoid sensilla; (h) abdominal cuticle surface; (i) ultrastructure of the cuticle surface.
FIGURE 17 in Morphology, molecular phylogenetics, and DNA barcoding revealed a new unusual species of the aphid genus Pleotrichophorus from the USA (Insecta, Hemiptera Aphididae)
FIGURE 17. SEM of Pleotrichophorus glandulosus (Kaltenbach, 1846): apterous viviparous female. mouthparts and legs sensilla: (a, b) URS with trichoid sensilla of two lengths (arrows) and very short type III basiconic sensilla (asterisk); (c) seven pairs of type III basiconic sensilla on the very apical end of URS; (d, e) trichoid sensilla on III FEMUR; (f) trichoid sensilla on the proximal part of III TIBIA; (g) trichoid sensilla on the distal part of III TIBIA; (h) HT I with three ventral setae setae and basal part of HT II with campaniform on the dorsal side (arrow); (i) distal end of HT II with long empodial setae (arrow).
FIGURE 16 in Morphology, molecular phylogenetics, and DNA barcoding revealed a new unusual species of the aphid genus Pleotrichophorus from the USA (Insecta, Hemiptera Aphididae)
FIGURE 16. SEM of Pleotrichophorus glandulosus (Kaltenbach, 1846): apterous viviparous female. antennal sensilla: (a) small multiporous placoid sensilla (red) and type I trichoid sensilla (blue) on ANT III; (b) structure of the type I trichoid sensillum; (c, d, e) structure of small multiporous placoid sensilla; (f) large multiporous placoid sensillum (yellow) on ANT V general view; (g) ultrastructure of the large multiporous placoid sensillum; (h) large multiporous placoid sensillum (yellow), small multiporous placoid sensilla (green) and sunken coeloconic sensilla (pink) on ANT VI BASE; (i) type II trichoid sensilla on the PT.
FIGURE 12 in Morphology, molecular phylogenetics, and DNA barcoding revealed a new unusual species of the aphid genus Pleotrichophorus from the USA (Insecta, Hemiptera Aphididae)
FIGURE 12. SEM of general characters of the alate viviparous female of Pleotrichophorus blackmani sp. n.: (a) head and pronotum; (b) compound eye and ocellus; (c) frontal ocellus and trichoid sensilla; (d) cuticle surface; (e) ultrastructure of the cuticle surface; (f) fore wing; (g) distal end of pterostigma and radial sector; (h) ultrastructure of wing surface and the scale-like element; (i) hind wing with hamuli enlarged; (j) abdomen; (k) SIPH; (l) cauda, s-siphunculi, c-cauda.
FIGURE 13 in Morphology, molecular phylogenetics, and DNA barcoding revealed a new unusual species of the aphid genus Pleotrichophorus from the USA (Insecta, Hemiptera Aphididae)
FIGURE 13. SEM of Pleotrichophorus blackmani sp. n. alate viviparous female. head and antennal sensilla: (a) frontal ocellus and trichoid sensilla; (b, c) structure of trichoid sensilla of different lengths; (d) small multiporous placoid sensilla (red) and type I trichoid sensilla (blue) on ANT III; (e) structure of type I trichoid sensillum; (f) structure of the small multiporous placoid sensilla; (g-i) ultrastructure of small multiporous placoid sensillum and the secretion; (j) large multiporous placoid sensillum (yellow) on ANT V; (k) ultrastructure of the large multiporous placoid sensillum; (l) large multiporous placoid sensillum (yellow), small multiporous placoid sensilla (green) and sunken coeloconic sensilla (pink) on ANT VI BASE; (m) ultrastructure of the small multiporous placoid sensillum; (n, o) ultrastructure of sunken coeloconic sensilla.
FIGURE 14 in Morphology, molecular phylogenetics, and DNA barcoding revealed a new unusual species of the aphid genus Pleotrichophorus from the USA (Insecta, Hemiptera Aphididae)
FIGURE 14. SEM of apterous viviparous female of Pleotrichophorus glandulosus (Kaltenbach, 1846): (a) dorsal habitus; (b) head and pronotum; (c) end of dorsal side of abdomen; (d) surface of SIPH; (e) distal tip of SIPH; (f) lateral side of the end of abdomen; (g) cauda, H-head, Pr-pronotum, MS-mesonotum, Mt-metanotum, I-VIII-abd. tergites I-VIII, s-siphunculi, c-cauda, ap-anal plate, gp-genital plate.
FIGURE 11 in Morphology, molecular phylogenetics, and DNA barcoding revealed a new unusual species of the aphid genus Pleotrichophorus from the USA (Insecta, Hemiptera Aphididae)
FIGURE 11. SEM of Pleotrichophorus blackmani sp. n. apterous viviparous female. sensilla on legs: (a) III FEMUR with very short trichoid sensilla; (b) structure of femoral trichoid sensillum; (c) proximal part of III TIBIA with trichoid sensilla; (d) structure of trichoid sensillum with visible molting pore (star); (e) ultrastructure of the molting pore; (f) trichoid sensilla on the middle part of III TIBIA; (g) structure of trichoid sensillum from the middle part; (h) trichoid sensilla on the proximal part of III TIBIA; (i, j) structure of the sensilla from the distal part; (k) hind tarsus with visible campaniform sensillum (arrow); (l) HT I with three ventral setae; (m) structure of the campaniform sensillum; (n) distal end of HT II with short empodial seta; (o) structure of an empodial seta.
FIGURE 4 in Morphology, molecular phylogenetics, and DNA barcoding revealed a new unusual species of the aphid genus Pleotrichophorus from the USA (Insecta, Hemiptera Aphididae)
FIGURE 4. Pleotrichophorus blackmani sp. n. slide-mounted specimen of oviparous female: (a) habitus; (b) arrangement of pseudosensoria on hind tibiae; (c) shape of pseudosensoria.
FIGURE 10 in Morphology, molecular phylogenetics, and DNA barcoding revealed a new unusual species of the aphid genus Pleotrichophorus from the USA (Insecta, Hemiptera Aphididae)
FIGURE 10. SEM of Pleotrichophorus blackmani sp. n. apterous viviparous female. mouthparts sensilla: (a) ventral view of URS with well-visible trichoid sensilla (arrows); (b) lateral view of URS with well-visible trichoid sensilla (arrow); (c) distal end of URS with long trichoid sensilla and very short type III basiconic sensilla (asterisk); (d) structure of type I trichoid sensillum; (e) structure of type II basiconic sensillum; (f) ultrastructure of the socket of trichoid sensillum; (g, h) ventral and lateral view of the apical tip of URS with six pairs of type III basiconic sensilla; (i) ultrastructure of the basiconic sensillum with molting pore (star) on the base.
FIGURE 5 in Morphology, molecular phylogenetics, and DNA barcoding revealed a new unusual species of the aphid genus Pleotrichophorus from the USA (Insecta, Hemiptera Aphididae)
FIGURE 5. Scanning electron microscopy (SEM) of apterous viviparous female of Pleotrichophorus blackmani sp. n.: (a) dorsal habitus; (b) head and pronotum; (c) posterior part of abdomen dorsally; (d) surface of SIPH; (e) distal tip of SIPH; (f) lateral side of the end of abdomen; (g) cauda, H—head, Pr—pronotum, MS—mesonotum, Mt—metanotum, I-VIII-abd. tergites I-VIII, s—siphunculi, c—cauda, ap—anal plate, gp—genital plate.
FIGURE 9 in Morphology, molecular phylogenetics, and DNA barcoding revealed a new unusual species of the aphid genus Pleotrichophorus from the USA (Insecta, Hemiptera Aphididae)
FIGURE 9. SEM of Pleotrichophorus blackmani sp. n. apterous viviparous female. antennal sensilla: (a) small multiporous placoid sensilla (red) and type I trichoid sensilla (blue) on ANT III; (b, c) structure of small multiporous placoid sensilla with secretion; (d) ultrastructure of the sensillum membrane; (e-g) large multiporous placoid sensillum (yellow) and type I trichoid sensilla (blue) on ANT V general view; (h-i) ultrastructure of the large multiporous placoid sensillum; (j) ANT VI BASE with sensilla on the distal end; (k) large multiporous placoid sensillum (yellow); (l) small multiporous placoid sensilla (green) and sunken coeloconic sensilla (pink); (m) ultrastructure of the secretion on sensilla surface; (n) ultrastructure of large multiporous placoid sensillum; (o) ultrastructure of sunken coeloconic sensillum.
FIGURE 3 in Morphology, molecular phylogenetics, and DNA barcoding revealed a new unusual species of the aphid genus Pleotrichophorus from the USA (Insecta, Hemiptera Aphididae)
FIGURE 3. Detailed morphological characters of Pleotrichophorus blackmani sp. n. Apterous viviparous female: (a) head setae; (b) secondary rhinaria on ANT III; (c) ANT III chaetotaxy; (d) posterior part of abdomen; (e) SIPH; (f) cauda; alate viviparous female: (g) secondary rhinaria on ANT III; (h) URS; (i) fore wing.
FIGURE 7 in Morphology, molecular phylogenetics, and DNA barcoding revealed a new unusual species of the aphid genus Pleotrichophorus from the USA (Insecta, Hemiptera Aphididae)
FIGURE 7. SEM of Pleotrichophorus blackmani sp. n. apterous viviparous female, thorax and abdomen surface: (a) thorax surface with trichoid sensillum (arrow); (b) abdomen general surface structure with trichoid sensilla (arrows); (c) abdomen surface with wax layer; (d) ultrastructure of the wax secretion; (e) structure of the surface of cuticle without wax (f) ultrastructure of the surface without wax.
FIGURE 8 in Morphology, molecular phylogenetics, and DNA barcoding revealed a new unusual species of the aphid genus Pleotrichophorus from the USA (Insecta, Hemiptera Aphididae)
FIGURE 8. SEM of Pleotrichophorus blackmani sp. n. apterous viviparous female. antennal sensilla: (a) dorsal side of the pedicel with campaniform sensillum (star); (b, c) ventral side of the pedicel with rhinariolum (arrow); (d) structure of trichoid sensillum on the pedicel; (e, f) ultrastructure of the rhinariola; (g) ultrastructure campaniform sensillum; (h) type I trichoid sensilla on ANT III; (i) ultrastructure of type I trichoid sensillum; (j-l) structure and ultrastructure of type II trichoid sensilla on PT.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.