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3,761 results for “phylogenetic relationships”
Linked collectors and determiners for: A new inquiline ant (Hymenoptera: Formicidae) in Cataglyphis and its phylogenetic relationship.
Natural history specimen data linked to collectors and determiners held within, "A new inquiline ant (Hymenoptera: Formicidae) in Cataglyphis and its phylogenetic relationship". Claims or attributions were made on Bionomia by volunteer Scribes, <a href="https://bionomia.net/dataset/54b2150d-e662-450d-b3c2-73b51ac32041">https://bionomia.net/dataset/54b2150d-e662-450d-b3c2-73b51ac32041</a> using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, <a href="https://gbif.org/dataset/54b2150d-e662-450d-b3c2-73b51ac32041">https://gbif.org/dataset/54b2150d-e662-450d-b3c2-73b51ac32041</a>. Formatted as a Frictionless Data package.
Linked collectors and determiners for: New species and phylogenetic relationships of the spider genus Coptoprepes using morphological and sequence data (Araneae: Anyphaenidae).
Natural history specimen data linked to collectors and determiners held within, "New species and phylogenetic relationships of the spider genus Coptoprepes using morphological and sequence data (Araneae: Anyphaenidae)". Claims or attributions were made on Bionomia by volunteer Scribes, <a href="https://bionomia.net/dataset/8ceb6188-a9e2-4687-b929-47e5f380ed70">https://bionomia.net/dataset/8ceb6188-a9e2-4687-b929-47e5f380ed70</a> using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, <a href="https://gbif.org/dataset/8ceb6188-a9e2-4687-b929-47e5f380ed70">https://gbif.org/dataset/8ceb6188-a9e2-4687-b929-47e5f380ed70</a>. Formatted as a Frictionless Data package.
Linked collectors and determiners for: Phylogenetic relationships of the comb-footed spider subfamily Spintharinae (Araneae, Araneoidea, Theridiidae), with generic diagnoses and a key to the genera.
Natural history specimen data linked to collectors and determiners held within, "Phylogenetic relationships of the comb-footed spider subfamily Spintharinae (Araneae, Araneoidea, Theridiidae), with generic diagnoses and a key to the genera". Claims or attributions were made on Bionomia by volunteer Scribes, <a href="https://bionomia.net/dataset/62307f4a-1073-4e79-9aa0-276c454e5264">https://bionomia.net/dataset/62307f4a-1073-4e79-9aa0-276c454e5264</a> using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, <a href="https://gbif.org/dataset/62307f4a-1073-4e79-9aa0-276c454e5264">https://gbif.org/dataset/62307f4a-1073-4e79-9aa0-276c454e5264</a>. Formatted as a Frictionless Data package.
Linked collectors and determiners for: Phylogenetic relationships based on morphological data and taxonomy of the genus Salvadora Baird & Girard, 1853 (Reptilia, Colubridae).
Natural history specimen data linked to collectors and determiners held within, "Phylogenetic relationships based on morphological data and taxonomy of the genus Salvadora Baird & Girard, 1853 (Reptilia, Colubridae)". Claims or attributions were made on Bionomia by volunteer Scribes, <a href="https://bionomia.net/dataset/d2a76db8-6bb1-4183-86ad-e1e2d792fc53">https://bionomia.net/dataset/d2a76db8-6bb1-4183-86ad-e1e2d792fc53</a> using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, <a href="https://gbif.org/dataset/d2a76db8-6bb1-4183-86ad-e1e2d792fc53">https://gbif.org/dataset/d2a76db8-6bb1-4183-86ad-e1e2d792fc53</a>. Formatted as a Frictionless Data package.
Fig. 3. Phylogenetic relationships among Euphorbia flavicoma, E. montenegrina, E. serpentini and E in High genetic and morphological diversification of the Euphorbia verrucosa alliance (Euphorbiaceae) in the Balkan and Iberian peninsulas
Fig. 3. Phylogenetic relationships among Euphorbia flavicoma, E. montenegrina, E. serpentini and E. verrucosa inferred by neighbour-joining analysis based on AFLP fingerprinting and presented in detail in supplementary Fig. S3. Terminals belonging to the same taxa/ploidy levels were collapsed; the heights of the triangles correspond to the number of individuals analysed. Numbers above branches are bootstrap values, and 2x and 4x indicate diploid and tetraploid ploidy levels, respectively. Within E. montenegrina, both ploidy levels appeared in several clusters.
Fig. 3 in Phylogenetic relationships and sectional delineation within Gentiana (Gentianaceae)
Fig. 3. Distribution of morphological traits relevant for the identification of sections in Gentiana, in the light of phylogenetic relationships among these sections. The phylogenetic tree is identical to the one shown in Fig. 1.
Fig. 2 in Phylogenetic relationships and sectional delineation within Gentiana (Gentianaceae)
Fig. 2. Simplified phylogenetic trees of 254 nuclear anchored loci, plastid genomes and ITS region (rDNA cistron) produced via anchored hybrid enrichment. The upper two phylograms are based upon anchored loci either with tips collapsed according to the sectional delineation presented in this study (left), or with tips collapsed according to the sectional delineation by Ho & Liu (2001, right). Colour coding corresponds to Fig. 1. All nodes are fully supported (BI: 1.00 PP, ML: 100% BS) unless otherwise stated. Arrows in blue (anchored loci) and red (ITS region) show incongruences in phylogenetic relationships among sections, in comparison to the plastid phylogeny. Asterisks indicate nodes that are not supported by any analysis. Corresponding phylograms without collapsed tips are available for the rDNA cistron and the plastid phylogenies as supplementary Fig. S1 and S2.
Fig. 1 in Phylogenetic relationships and sectional delineation within Gentiana (Gentianaceae)
Fig. 1. Phylogram of ingroup species (outgroup removed) derived from 254 nuclear anchored loci produced via anchored hybrid enrichment. Phylogenetic support values for both Bayesian inference and maximum likelihood are shown at nodes only when they differ from 1.00 posterior probability and 100% bootstrap support. The double slash (//) symbolises an artificial shortening of this branch, as sect. Chondrophyllae produced a very long branch. The figure is colour-coded, with each colour referring to a clade in the phylogeny, a section corresponding to our new taxonomic treatment, and a picture illustrating each section. The species displayed are: A, Gentiana hexaphylla; B, G. tongolensis; C, G. frigida; D, G. verna; E, G. harrowiana; F, G. phyllocalyx; G, G. lutea; H, G. acaulis; I, G. aperta; J, G. praeclara; K, G. stipitata; L, G. officinalis; M, G. sceptrum. – Photographs: Adrien Favre.
Figure 19. A in New gammaroid family, genera and species from subterranean waters of Japan, and their phylogenetic relationships (Crustacea: Amphipoda)
Figure 19. A, strict consensus tree obtained by maximum parsimony analysis; B, neighbour-joining tree. Numbers near branches indicate bootstrap values> 50%. Trees rooted by the outgroup taxon Melita sp.
Figure 9 in Phylogenetic relationships within Amphiglena Claparède, 1864 (Polychaeta: Sabellidae), description of five new species from Australia, a new species from Japan, and comments on previously described species
Figure 9. Amphiglena nishii sp. nov. SEM preparation, paratype, AM W30485. (A) Whole specimen, ventral view; (B) anterior segments and base of crown, ventral view; (C) crown and anterior segments, dorsal view; (D) first and second thoracic chaetigers, ventral view; (E) uncini and companion chaetae second thoracic chaetiger; (F) parapodia, mid-abdominal segment; (G) uncini, mid-abdominal segment.
Figure 8 in Phylogenetic relationships within Amphiglena Claparède, 1864 (Polychaeta: Sabellidae), description of five new species from Australia, a new species from Japan, and comments on previously described species
Figure 8. Amphiglena maiteae sp. nov. SEM preparation, paratypes, AM W30399, AM W30400. (A) Whole specimen, ventral view; (B) anterior segments and base of crown, ventral view; (C) same, dorsal view; (D) second thoracic chaetigers, ventral view; (E) notochaetae, second thoracic chaetiger; (F) uncini and companion chaetae, second thoracic segment; (G) mid-abdominal segment, dorsal view; (H) mid abdominal uncini.
Figure 5 in Phylogenetic relationships within Amphiglena Claparède, 1864 (Polychaeta: Sabellidae), description of five new species from Australia, a new species from Japan, and comments on previously described species
Figure 5. Amphiglena bondi sp. nov. SEM preparation, paratypes, AM W30480. (A) Whole specimen, ventral view; (B) anterior segments and base of crown, ventral view; (C) anterior segments, dorsal view; (D) first and second thoracic chaetigers, ventral view; (E) uncini and companion chaetae second thoracic chaetiger; (F) parapodia, first abdominal segment; (G) uncini, first abdominal segment.
Figure 4 in Phylogenetic relationships within Amphiglena Claparède, 1864 (Polychaeta: Sabellidae), description of five new species from Australia, a new species from Japan, and comments on previously described species
Figure 4. Line drawings of uncini. (A, B) A. gracilis sp. nov.: (A) thoracic uncini, seventh chaetiger; (B) midabdominal chaetiger. (C, D) A. bondi sp. nov.: (C) thoracic uncini, seventh chaetiger; (D) mid-abdominal chaetiger. (E, F) A. lenae sp. nov.: (E) thoracic uncini, seventh chaetiger; (F) mid-abdominal chaetiger. (G, H) A. magna sp. nov.: (G) thoracic uncini, seventh chaetiger; (H) mid-abdominal chaetiger. (I, J) A. maiteae sp. nov.: (I) seventh chaetiger; (J) mid-abdominal chaetiger. (K–N) A. nishii sp. nov.: (K, L) seventh chaetiger; (M, N) midabdominal chaetiger. Scale bar: 10 Mm.
Figure 1 in Phylogenetic relationships within Amphiglena Claparède, 1864 (Polychaeta: Sabellidae), description of five new species from Australia, a new species from Japan, and comments on previously described species
Figure 1. (A) One of the most parsimonious cladograms (L 95, CI 0.62, RI 0.73) from the matrix in Appendix 3. Black circles indicate synapomorphies and white circles homoplasies showing unambiguous changes only. (B) Strict consensus of five most parsimonious trees.
Figure 3 in Phylogenetic relationships within Amphiglena Claparède, 1864 (Polychaeta: Sabellidae), description of five new species from Australia, a new species from Japan, and comments on previously described species
Figure 3. Amphiglena gracilis sp. nov. Micrographs. (A) Whole specimen ventral view; (B) detail of anterior segments, ventral view; (C) pygidium and posterior segment, ventral view; (D) last thoracic and abdominal segments, ventral view.
Figure 11 in Phylogenetic relationships within Amphiglena Claparède, 1864 (Polychaeta: Sabellidae), description of five new species from Australia, a new species from Japan, and comments on previously described species
Figure 11. Amphiglena terebro. SEM preparation, AM W30482. (A) Anterior segments and crown, ventral view; (B) detail of anterior segments and base of crown; (C) anterior and posterior peristomial rings; (D) anterior segments and base of crown, dorsal view.
Figure 10 in Phylogenetic relationships within Amphiglena Claparède, 1864 (Polychaeta: Sabellidae), description of five new species from Australia, a new species from Japan, and comments on previously described species
Figure 10. Amphiglena jimenezi. SEM preparation, paratypes, AM W30487. (A) Anterior segments and base of crown, ventral view; (B) second and third thoracic chaetigers, ventral view; (C) uncini and companion chaetae, seventh thoracic segment; (D) mid-abdominal segment, lateral view.
Figure 2 in Phylogenetic relationships within Amphiglena Claparède, 1864 (Polychaeta: Sabellidae), description of five new species from Australia, a new species from Japan, and comments on previously described species
Figure 2. Amphiglena gracilis sp. nov. SEM preparation, paratypes, AM W30402–AM W30404, AM W30483, AM W30484. (A) Whole specimen, lateral view; (B) anterior end, ventral view; (C) anterior end, dorsal view; (D) detail of base of crown and peristomium, ventral view; (E) base of crown and dorsal radiolar appendages; (F) notochaetae of fourth thoracic chaetiger; (G) mid-abdominal neurochaetae; (H) uncini, second thoracic chaetiger; (I) uncini and companion chaetae seventh thoracic chaetiger; (J) mid-abdominal uncini.
Figure 7 in Phylogenetic relationships within Amphiglena Claparède, 1864 (Polychaeta: Sabellidae), description of five new species from Australia, a new species from Japan, and comments on previously described species
Figure 7. Amphiglena magna sp. nov. SEM preparation, paratype, AM W30486. (A) Whole specimens, dorsolateral view; (B) anterior segments and base of crown, ventral view; (C) same, dorsal view; (D) notochaetae, first thoracic chaetiger, ventral view; (E) uncini and companion chaetae second thoracic chaetiger; (F) six and seventh thoracic chaetigers, ventral view; (G) neurochaetae, anterior abdominal segment; (H) uncini, anterior abdominal chaetiger.
Figure 6 in Phylogenetic relationships within Amphiglena Claparède, 1864 (Polychaeta: Sabellidae), description of five new species from Australia, a new species from Japan, and comments on previously described species
Figure 6. Amphiglena lenae sp. nov. SEM preparation, paratype, AM W30479. (A) Whole specimen, ventral view; (B) anterior segments and base of crown, ventral view; (C) base of crown and peristomium, lateral view; (D) first and second thoracic chaetigers, ventral view; (E) uncini and companion chaetae, seventh thoracic chaetiger; (F) neurochaetae and uncini, ventral view, mid-abdominal segment; (G) uncini, same segment.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.