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FIGURE. Entoloma argus: a. basidiospores; b, c. basidia; d. cheilocystidia (a, b, d, from LE F-312694, holotype; c, from LE F-315915). Scale bars 10 μm. Drawings by O. Morozova. in Four new species of Entoloma (Entolomataceae, Agaricomycetes) subgenera Cyanula and Claudopus from Vietnam and their phylogenetic position
FIGURE. Entoloma argus: a. basidiospores; b, c. basidia; d. cheilocystidia (a, b, d, from LE F-312694, holotype; c, from LE F-315915). Scale bars 10 μm. Drawings by O. Morozova.
FIGURE. Entoloma daphnis: a–b. basidiocarps, c. basidiospores; d. pileipellis (all from LE F-262915, holotype). Scale bars a–b 1 cm, c–d 10 μm. Photos a–b by A. Kovalenko, c–d by O. Morozova. in Four new species of Entoloma (Entolomataceae, Agaricomycetes) subgenera Cyanula and Claudopus from Vietnam and their phylogenetic position
FIGURE. Entoloma daphnis: a–b. basidiocarps, c. basidiospores; d. pileipellis (all from LE F-262915, holotype). Scale bars a–b 1 cm, c–d 10 μm. Photos a–b by A. Kovalenko, c–d by O. Morozova.
FIGURE. Entoloma icarus: a. basidiospores; b. basidium; c. cheilocystidia (all from LE F-312696, holotype). Scale bars 10 μm. Drawings by O. Morozova. in Four new species of Entoloma (Entolomataceae, Agaricomycetes) subgenera Cyanula and Claudopus from Vietnam and their phylogenetic position
FIGURE. Entoloma icarus: a. basidiospores; b. basidium; c. cheilocystidia (all from LE F-312696, holotype). Scale bars 10 μm. Drawings by O. Morozova.
FIGURE. Phylogenetic tree derived from Bayesian analysis, based on nrLSU data. Posterior probability (PP> 0.95) values from the Bayesian analysis are added at the nodes. The scale bar represents the number of nucleotide changes per site. (T) indicates the type specimen for this species. The new species are in bold. in Four new species of Entoloma (Entolomataceae, Agaricomycetes) subgenera Cyanula and Claudopus from Vietnam and their phylogenetic position
FIGURE. Phylogenetic tree derived from Bayesian analysis, based on nrLSU data. Posterior probability (PP> 0.95) values from the Bayesian analysis are added at the nodes. The scale bar represents the number of nucleotide changes per site. (T) indicates the type specimen for this species. The new species are in bold.
FIGURE. Entoloma argus: a–c. basidiocarps; d. basidiospores; e. cheilocystidia; f. pileipellis (a, d–f, from LE F-312694, holotype; b–c, from LE F-315915). Scale bars a–c 1 cm, d–f 10 μm. Photos by O. Morozova. in Four new species of Entoloma (Entolomataceae, Agaricomycetes) subgenera Cyanula and Claudopus from Vietnam and their phylogenetic position
FIGURE. Entoloma argus: a–c. basidiocarps; d. basidiospores; e. cheilocystidia; f. pileipellis (a, d–f, from LE F-312694, holotype; b–c, from LE F-315915). Scale bars a–c 1 cm, d–f 10 μm. Photos by O. Morozova.
FIGURE. Entoloma arion: a–c. basidiocarps; d. cheilocystidia; e. basidiospores; f. pileipellis; g. caulocystidia (all from LE F-312691, holotype). Scale bars a–c 1 cm, d–g 10 μm. Photos by O. Morozova. in Four new species of Entoloma (Entolomataceae, Agaricomycetes) subgenera Cyanula and Claudopus from Vietnam and their phylogenetic position
FIGURE. Entoloma arion: a–c. basidiocarps; d. cheilocystidia; e. basidiospores; f. pileipellis; g. caulocystidia (all from LE F-312691, holotype). Scale bars a–c 1 cm, d–g 10 μm. Photos by O. Morozova.
FIGURE. Entoloma icarus: a–c. basidiocarps; d. basidiospores; e. cheilocystidia; f. pileipellis (all from LE F-312696, holotype). Scale bars a–c 1 cm, d–f 10 μm. Photos a by E. Popov, b–f by O. Morozova. in Four new species of Entoloma (Entolomataceae, Agaricomycetes) subgenera Cyanula and Claudopus from Vietnam and their phylogenetic position
FIGURE. Entoloma icarus: a–c. basidiocarps; d. basidiospores; e. cheilocystidia; f. pileipellis (all from LE F-312696, holotype). Scale bars a–c 1 cm, d–f 10 μm. Photos a by E. Popov, b–f by O. Morozova.
Explaining the physics of transfer learning a data-driven subgrid-scale closure to a different turbulent flow
<p>Data for the six test cases of 2D turbulence explored in the paper, Explaining the physics of transfer learning a data-driven subgrid-scale closure to a different turbulent flow.</p>
FIGURE 1 in A new primitive genus of the family Psychidae having long-scaled female antennae from the Ryukyus, Japan (Lepidoptera, Tineoidea)
FIGURE 1. Lepidoceropsyche manoi gen. & sp. nov. (A, C–G) and Psychidae gen. sp.(B). A. holotype female; B. female from South Africa in the collection of the Natural History Museum, London (photo by T. Sobczyk); C. left antenna of the holotype; D. part of left antenna of the holotype; E. part of macerated antenna of a paratype, most of scales were lost; F. unscaled wings of a pratype; G. metathoracic sternum and apophyses from empimera of a paratype, right pleuron was cut and taken off, right lateral aspect (apep: apophysis from metepimeron; dbs: discrimen of basisternum; cx2: left hind coxa; fra: metafuracal arm; frs: metafurcisternum; st1; 1st abdominal sternum).
FIGURE. 2 in A new primitive genus of the family Psychidae having long-scaled female antennae from the Ryukyus, Japan (Lepidoptera, Tineoidea)
FIGURE. 2. Lepidoceropsyche manoi gen. & sp. nov. A. head of paratype, anterior aspect; B. ditto, left lateral spect; C. ditto, ventral aspect; D. legs; E. apical 1/2 of fore tibia with epiphysis; F. terminalia of a paratype, ventral aspect (apa: apophysis anterioris; app: apophysis posterioris; apv: ventral apophysis); G. part of terminalia, ventral aspect (bc: bursa copulatrix; db: ductus bursae; ds: ductus seminalis; lav: lamella antevaginalis); H. apical part of ovipositor (apv: ventral apophysis; pa: papilla analis).
Data related to "Near-bed sediment transport processes during onshore bar migration in large-scale experiments. Comparison with offshore bar migration."
<p>Abstract:</p> <p>This paper presents novel insights into nearshore sediment transport processes during bar migration on the basis of large-scale laboratory experiments with bichromatic wave groups on a relatively steep initial beach slope (1:15). Insights are based on detailed measurements of velocity and sand concentration near the bed from shoaling up to the outer breaking zone including suspended sediment and sheet flow transport. The analysis focuses on onshore migration under an accretive wave condition but comparison to an erosive condition highlights important differences. Decomposition shows that total net transport mainly results from a balance of short wave-related, bedload net onshore transport and current-related, suspended net offshore transport. When comparing the accretive to the more energetic erosive condition, the balance shifts towards net onshore transport, and onshore migration, because the short wave-related transport does not decrease as much as the current-related transport. This is related to the effects of skewness and asymmetry combined with larger sediment entrainment and undertow magnitude under the erosive condition. Net transports from streaming in the wave boundary layer and from infragravity waves are noticeable but only play a subordinate role. Identified priorities for numerical model development include parametrization of wave nonlinearity effects and better description of wave breaking and its influences on sediment suspension. The present data, unique in their combination of high measurement detail with fully-evolving accretive beach profiles, help to improve numerical modeling of long-term morphological evolution.</p> <p>About the data:</p> <p>The folder “Beach Profiles” contains the measurements from the mechanical profiler before and after each test. To save time, only the morphologically active section of the profiles was measured. Additionally, the folder contains the initial profiles at the start of each sequence (after application of the benchmark waves). Here the full profile was measured.</p> <p>The structure “MobFrame” contains the absolute cross-shore position of the mobile frame (from which detailed measurements were taken) in the considered tests.</p> <p>The folder “ACVP” contains structures with ensemble-averaged velocity and concentration measurements in vertical reference to the undisturbed bed level or a few bins below it (zeta<sub>0</sub>-coordinate system as described in the paper). For better interpretation of the measurements, it also features the ensemble-averaged intrawave instantaneous bed elevation (erosion depth) and the upper limit of the sheet flow layer.</p> <p>The folder “ADV” contains structures with the ensemble-averaged ADV data of each test. Apart from the velocity components of each ADV they contain the vertical elevation of each ADV with respect to the ACVP transceiver. The ADV measurements were not subject to the same vertical referencing procedure that was described in the paper for the near-bed ACVP measurements.</p> <p>The folder “OBS” contains structures with the ensemble-averaged OBS data of each test. Apart from the concentration measurements in each OBS sensor they contain the vertical elevation of each OBS with respect to the ACVP transceiver.</p> <p>The folder “ETA” contains structures with the ensemble-averaged surface elevation data of each test (from different instruments as described in the paper). The location of each instrument is given in absolute cross-shore coordinates x.</p> <p> </p> <p>For visualizing the near-bed concentration data, which may not be as trivial as visualizing the rest of the data, an example of MATLAB code is given:</p> <p>%S=ACVP_xx; %to choose which ACVP file you want to look into</p> <p>con=S.c;</p> <p>con(con<1)=1; %to cater for the cells where the logarithm is not defined</p> <p>xphase=linspace(0,1,length(S.solbed)).*ones(size(S.c,2),size(S.c,1));</p> <p>figure; hold on; box on;</p> <p>[C,h]=contourf(xphase,S.z,log10(transpose(con)),[0:0.1:3]);</p> <p>cbh=colorbar; caxis([0 3]);</p> <p>set(h,'edgecolor','none');</p> <p>tt=get(cbh,'Title'); set(tt,'String','$log_{10}(c)$ $[kg/m^3]$','Interpreter','Latex');</p> <p>plot(xphase(1,:),S.solbed,'k','Linewidth',1.5);</p> <p>plot(xphase(1,:),S.solflo,'r','Linewidth',1.5);</p> <p>xlabel('$t/T_r$','Interpreter','Latex')</p> <p>ylabel('$\zeta_0$ $[m]$','Interpreter','Latex')</p> <p>set(gca,'Fontsize',18)</p>
FIGURE. Marchantia emarginata Reinw., Blume & Nees (A) Dorsal surface of thallus (B, C) Epidermal pores from the dorsal epidermis of thallus (D) Laminal scale (E) Median scale (F) Appendage of laminal scale (G) Margin of the gemma cup. A–G Ruklani & Rubasinghe 169-14SR (PDA). in Thalloid Liverworts (Marchantiopsida) of Sri Lanka
FIGURE. Marchantia emarginata Reinw., Blume & Nees (A) Dorsal surface of thallus (B, C) Epidermal pores from the dorsal epidermis of thallus (D) Laminal scale (E) Median scale (F) Appendage of laminal scale (G) Margin of the gemma cup. A–G Ruklani & Rubasinghe 169-14SR (PDA).
FIGURE. Morphology of ventral scales of Sri Lankan Marchantia sp. I (A) Light red laminal scale of M. acaulis (B) Yellowish median scale of M. acaulis boarded by light red to purple cells (C) Laminal scale of M. papillata (D) Purplish coloured median scale of M. papillata (E) Light red coloured laminal scale of M. emarginata with hyaline apical papillae (F) Median scale of M. emarginata. A— Ruklani & Rubasinghe 108-14SR; B—Ruklani & Rubasinghe 108-14SR; C—Ruklani & Rubasinghe 04-14SR; D—Ruklani & Rubasinghe 04-14SR; E—Ruklani & Rubasinghe 169-14SR; F—Ruklani & Rubasinghe 169-14SR. in Thalloid Liverworts (Marchantiopsida) of Sri Lanka
FIGURE. Morphology of ventral scales of Sri Lankan Marchantia sp. I (A) Light red laminal scale of M. acaulis (B) Yellowish median scale of M. acaulis boarded by light red to purple cells (C) Laminal scale of M. papillata (D) Purplish coloured median scale of M. papillata (E) Light red coloured laminal scale of M. emarginata with hyaline apical papillae (F) Median scale of M. emarginata. A— Ruklani & Rubasinghe 108-14SR; B—Ruklani & Rubasinghe 108-14SR; C—Ruklani & Rubasinghe 04-14SR; D—Ruklani & Rubasinghe 04-14SR; E—Ruklani & Rubasinghe 169-14SR; F—Ruklani & Rubasinghe 169-14SR.
FIGURE. Plagiochasma appendiculatum Lehm. & Lindenb. II. (A) Green colour dorsal surface of thallus with notched apices (B) Cross section of thallus with air chambers and ventral tissue with oil bodies (C) Ventral scale with appendage (D) Slightly raised epidermal pore. A–E Ruklani & Rubasinghe 205-14SR (PDA). in Thalloid Liverworts (Marchantiopsida) of Sri Lanka
FIGURE. Plagiochasma appendiculatum Lehm. & Lindenb. II. (A) Green colour dorsal surface of thallus with notched apices (B) Cross section of thallus with air chambers and ventral tissue with oil bodies (C) Ventral scale with appendage (D) Slightly raised epidermal pore. A–E Ruklani & Rubasinghe 205-14SR (PDA).
FIGURE. Reboulia hemisphaerica (L.) Raddi I. (A) dorsal surface of thallus with archegoniphores B) female receptacles (C) archegoniphore (D) male receptacle (E) ventral scale (F) appendage of ventral scale G) mature female receptacle with sporophytes (H) epidermal pore from the dorsal epidermis of the thallus (I) cross section of an epidermal pore. A–C, E–I, Ruklani & Rubasinghe 211-14SR (PDA); D, Ruklani & Rubasinghe 303-15SR (PDA). in Thalloid Liverworts (Marchantiopsida) of Sri Lanka
FIGURE. Reboulia hemisphaerica (L.) Raddi I. (A) dorsal surface of thallus with archegoniphores B) female receptacles (C) archegoniphore (D) male receptacle (E) ventral scale (F) appendage of ventral scale G) mature female receptacle with sporophytes (H) epidermal pore from the dorsal epidermis of the thallus (I) cross section of an epidermal pore. A–C, E–I, Ruklani & Rubasinghe 211-14SR (PDA); D, Ruklani & Rubasinghe 303-15SR (PDA).
FIGURE. Marchantia papillata Raddi. subsp. grossibarba (Steph.) Bischl. (A) Dorsal surface of thallus (B & C) Epidermal pores, surface view (D) Cross section of epidermal pore (E) Laminal scale (F) Median scale (G & H) Appendages of laminal scales (I & J) Male receptacles (K) Archegoniophore (L & M) Female receptacles (N) Cross section of archegoniophore stalk (O) Light microscope view of spore. A–D, F, G, H, K, L, M, N Ruklani & Rubasinghe 04-14SR (PDA); E—Ruklani & Rubasinghe 14-14SR (PDA); I–J Ruklani & Rubasinghe 28-14 SR(PDA); O—Ruklani & Rubasinghe 415-16SR (PDA). in Thalloid Liverworts (Marchantiopsida) of Sri Lanka
FIGURE. Marchantia papillata Raddi. subsp. grossibarba (Steph.) Bischl. (A) Dorsal surface of thallus (B & C) Epidermal pores, surface view (D) Cross section of epidermal pore (E) Laminal scale (F) Median scale (G & H) Appendages of laminal scales (I & J) Male receptacles (K) Archegoniophore (L & M) Female receptacles (N) Cross section of archegoniophore stalk (O) Light microscope view of spore. A–D, F, G, H, K, L, M, N Ruklani & Rubasinghe 04-14SR (PDA); E—Ruklani & Rubasinghe 14-14SR (PDA); I–J Ruklani & Rubasinghe 28-14 SR(PDA); O—Ruklani & Rubasinghe 415-16SR (PDA).
FIGURE. Lunularia cruciata (L.) Dumort. ex Lindb. I. (A) Dorsal surface of thallus with gemma cups B) Epidermal pore from dorsal epidermis of thallus (C) Gemma (D) Ventral scale (E) Appendage of ventral scale (F) Cells with oil bodies on ventral scale (G) Cross section of epidermal pore and air chambers. A–G, Ruklani & Rubasinghe 113-14SR (PDA). in Thalloid Liverworts (Marchantiopsida) of Sri Lanka
FIGURE. Lunularia cruciata (L.) Dumort. ex Lindb. I. (A) Dorsal surface of thallus with gemma cups B) Epidermal pore from dorsal epidermis of thallus (C) Gemma (D) Ventral scale (E) Appendage of ventral scale (F) Cells with oil bodies on ventral scale (G) Cross section of epidermal pore and air chambers. A–G, Ruklani & Rubasinghe 113-14SR (PDA).
FIGURE. Plagiochasma rupestre (G. Forst.) Steph. I. (A) Thallus. (B) Thallus with immature male and female receptacles (C) Female receptacle. (D, E). Ventral scales. (F) Epidermal pore, surface view (G) Epidermal pore cross section. (H) Archegoniophore. (I & J) Light microscopic views of spores. A–B, D–G Ruklani & Rubasinghe 114-14SR (PDA); C Ruklani & Rubasinghe 02-14SR (PDA) H–J Ruklani & Rubasinghe 86-14SR (PDA). in Thalloid Liverworts (Marchantiopsida) of Sri Lanka
FIGURE. Plagiochasma rupestre (G. Forst.) Steph. I. (A) Thallus. (B) Thallus with immature male and female receptacles (C) Female receptacle. (D, E). Ventral scales. (F) Epidermal pore, surface view (G) Epidermal pore cross section. (H) Archegoniophore. (I & J) Light microscopic views of spores. A–B, D–G Ruklani & Rubasinghe 114-14SR (PDA); C Ruklani & Rubasinghe 02-14SR (PDA) H–J Ruklani & Rubasinghe 86-14SR (PDA).
FIGURE. Morphology of ventral scales of Sri Lankan Marchantia sp. II. (A) Light pink laminal scale of M. paleacea (B) Hyaline and pink median scale of M. paleacea (C) Laminal scale of M. pappeana (D) Median scale of M. pappeana (A–B, Ruklani & Rubasinghe 04- 14SR; C–D, Ruklani & Rubasinghe 55-14SR) in Thalloid Liverworts (Marchantiopsida) of Sri Lanka
FIGURE. Morphology of ventral scales of Sri Lankan Marchantia sp. II. (A) Light pink laminal scale of M. paleacea (B) Hyaline and pink median scale of M. paleacea (C) Laminal scale of M. pappeana (D) Median scale of M. pappeana (A–B, Ruklani & Rubasinghe 04- 14SR; C–D, Ruklani & Rubasinghe 55-14SR)
FIGURE. Marchantia acaulis Steph. (A) Dorsal surface of thallus (B) Archegoniophores (C) Female receptacle (D & E) Epidermal pores from the dorsal epidermis of the thallus (F) Laminal scale (G) Median scale (H) Appendage of laminal scale (I) Margin of the gemma cup. Ruklani & Rubasinghe 108-14SR (PDA). in Thalloid Liverworts (Marchantiopsida) of Sri Lanka
FIGURE. Marchantia acaulis Steph. (A) Dorsal surface of thallus (B) Archegoniophores (C) Female receptacle (D & E) Epidermal pores from the dorsal epidermis of the thallus (F) Laminal scale (G) Median scale (H) Appendage of laminal scale (I) Margin of the gemma cup. Ruklani & Rubasinghe 108-14SR (PDA).
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.