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Figure 2 from: Csősz S, Seifert B, László M, Yusupov ZM, Herczeg G (2023) Broadly sympatric occurrence of two thief ant species Solenopsis fugax (Latreille, 1798) and S. juliae (Arakelian, 1991) in the East European Pontic-Caspian region (Hymenoptera, Formicidae) is disclosed. ZooKeys 1187: 189-222. https://doi.org/10.3897/zookeys.1187.105866
Figure 2 Definition of preocular distance (PROC) of the Solenopsis workers measured in this study (for details, see Table 1).
Figure 1 from: Csősz S, Seifert B, László M, Yusupov ZM, Herczeg G (2023) Broadly sympatric occurrence of two thief ant species Solenopsis fugax (Latreille, 1798) and S. juliae (Arakelian, 1991) in the East European Pontic-Caspian region (Hymenoptera, Formicidae) is disclosed. ZooKeys 1187: 189-222. https://doi.org/10.3897/zookeys.1187.105866
Figure 1 Definition of morphological characters of the Solenopsis workers measured in this study. Head in dorsal view with measurement lines for CL1, CL2, CW, FRS, ClSpD, ApS, SApS, and SL; frontal region of the head dorsum with measurement lines for FR, FL, ClSpLL, and ClSpLM; dorsal view of mesosoma with measurement lines for ML, PEH, PEL, NOH, and PPH (for definitions, see Table 1).
Supplementary material 1 from: Csősz S, Seifert B, László M, Yusupov ZM, Herczeg G (2023) Broadly sympatric occurrence of two thief ant species Solenopsis fugax (Latreille, 1798) and S. juliae (Arakelian, 1991) in the East European Pontic-Caspian region (Hymenoptera, Formicidae) is disclosed. ZooKeys 1187: 189-222. https://doi.org/10.3897/zookeys.1187.105866
List of morphometrically investigated samples
Figure 3 from: Raupach MJ, Rulik B, Spelda J (2022) Surprisingly high genetic divergence of the mitochondrial DNA barcode fragment (COI) within Central European woodlice species (Crustacea, Isopoda, Oniscidea). ZooKeys 1082: 103-125. https://doi.org/10.3897/zookeys.1082.69851
Figure 3 Subtree of the Neighbor-joining topology based on Kimura 2-parameter distances of all analyzed specimens of Platyarthrus hoffmannseggii Brandt, 1833 and nearest neighbor. Branches with specimen ID-number from BOLD and sample localities. Numbers next to internal nodes are non-parametric bootstrap values (in %) with values higher than 80. BIN values are based on the barcode analysis from 05-06-2020. The isopod drawing by Christian Schmidt was obtained from Raupach (2005).
Figure 2 in New record and revised list of Megalops atlanticus (Elopiformes: Megalopidae) from Atlantic European waters
Figure 2. – Neighbor-Joining tree of Megalops COI barcode sequences showing the specimen captured in the Gulf of Cádiz in bold. The percentage of replicate trees in which the associated taxa clustered together in the bootstrap test (2,000 replicates) is shown next to the branches. The tree is drawn to scale, with branch lengths computed using the p-distance method in the units of the number of base differences per site. The analysis involved 19 nucleotide sequences and 652 nucleotide positions.
Supplementary material 1 from: Schmid-Egger C, Schmidt S, Bogusch P (2024) DNA Barcoding of Central European Gasteruptiidae and the rarely-collected families Evaniidae, Stephanidae, Trigonalidae, and Aulacidae (Hymenoptera, Apocrita). ZooKeys 1189: 275-286. https://doi.org/10.3897/zookeys.1189.114478
List of voucher specimens
Supplementary material 2 from: Schmid-Egger C, Schmidt S, Bogusch P (2024) DNA Barcoding of Central European Gasteruptiidae and the rarely-collected families Evaniidae, Stephanidae, Trigonalidae, and Aulacidae (Hymenoptera, Apocrita). ZooKeys 1189: 275-286. https://doi.org/10.3897/zookeys.1189.114478
Barcoding statistics
Figure 2 from: Schmid-Egger C, Schmidt S, Bogusch P (2024) DNA Barcoding of Central European Gasteruptiidae and the rarely-collected families Evaniidae, Stephanidae, Trigonalidae, and Aulacidae (Hymenoptera, Apocrita). ZooKeys 1189: 275-286. https://doi.org/10.3897/zookeys.1189.114478
Figure 2 Female of Gasteruption hastator from Saxony (Germany). It is the only largely red-coloured Gasteruption species in Central Europe. (Photo W.H. Liebig).
Figure 1 from: Sennikov AN, Tikhomirov VN (2024) Atlas Florae Europaeae notes, 33. Taxonomic synopsis of East European species of the Cytisus ratisbonensis group (Fabaceae). PhytoKeys 238: 157-197. https://doi.org/10.3897/phytokeys.238.118031
Figure 1 Pubescence on calyces in the Cytisus ratisbonensis group AC. borysthenicusBC. cinereusCC. kreczetovicziiDC. lithuanicusEC. polonicusFC. ratisbonensisGC. ruthenicusHC. semerenkoanusIC. elongatusJC. wulffii. Scale bars: 1 mm.
Figure 2 in Diet of the European eel Anguilla anguilla (Linnaeus, 1758) in two transitional waters of Southwestern Mediterranean
Figure 2. – Evolution of the digestive vacuity coefficient (Cv %) of Anguilla anguilla according to season and development stages in Mellah lagoon (in black) and Wadi El Kebir (in gray). The values above the bars mean the number of eels examined.
Figure 2 in Evidence of trilobed testes in European sardine (Sardina pilchardus)
Figure 2. – Three-lobed testes of three specimens of Sardina pilchardus. A: Testicular lobes from a male specimen (15.0 cm TL) captured in the Aegean Sea (GSA 22); B: Testicular lobes from a male specimen (15.1 cm TL) captured off the Northern Spanish Coast (GSA 6); C: Testicular lobes from a male specimen (13.7 cm TL) captured in the Northern Adriatic Sea (GSA 17). Ventral (V) and dorsal (D) sides of each testicle/subunit are indicated; D, E, F: Histological view of the testicular tissue of the individual from the Northern Adriatic Sea (13.7 cm TL). Figures D and E correspond to the main lobes, and F to the subunit of smaller size.
Impact of horizontal resolution and model time step on European precipitation extremes in the OpenIFS 43r3 atmosphere model
<p>Python scripts used for GMD paper</p>
Traversing European Coastlines (TREC) particle count and meterological data from Tara Schooner (Mar - Nov 2023)
<p>Dataset contains continuous particle counts from GRIMM EDM264 Pro particle counter with an attached meterological station that were collected from the Tara Schooner during the first year of the TREC expedition (2023). Date includes date, time, particle counts from PM1 to PM10 or size fraction from 0.25 µm to 35 µm. Contextual environmental variables include, temp., relative humiditiy, precipitation, Pressure, Wind velocity and direction.</p>
Traversing European Coastlines (TREC) particle count and meterological data from land (Mar - Nov 2023)
<p>Dataset contains continuous particle counts from GRIMM EDM264 Pro particle counter with an attached meterological station that were collected from land during the first year of the TREC expedition (2023). Date includes date, time, particle counts from PM1 to PM10 or size fraction from 0.25 µm to 35 µm. Contextual environmental variables include, temp., relative humiditiy, precipitation, Pressure, Wind velocity and direction.</p>
FIGURE 3. Kermes vermilio Planchon, 2 in Description of nymphal instars and adult female of Kermes vermilio Planchon (Hemiptera, Coccoidea, Kermesidae), with a synopsis of the European and Mediterranean species
FIGURE 3. Kermes vermilio Planchon, 2nd-instar male nymph.
FIGURE 2. Kermes vermilio Planchon, 2 in Description of nymphal instars and adult female of Kermes vermilio Planchon (Hemiptera, Coccoidea, Kermesidae), with a synopsis of the European and Mediterranean species
FIGURE 2. Kermes vermilio Planchon, 2nd-instar female nymph.
FIGURE 4. Kermes vermilio Planchon, 3 in Description of nymphal instars and adult female of Kermes vermilio Planchon (Hemiptera, Coccoidea, Kermesidae), with a synopsis of the European and Mediterranean species
FIGURE 4. Kermes vermilio Planchon, 3rd-instar female nymph.
FIGURE 1. Kermes vermilio Planchon, 1 in Description of nymphal instars and adult female of Kermes vermilio Planchon (Hemiptera, Coccoidea, Kermesidae), with a synopsis of the European and Mediterranean species
FIGURE 1. Kermes vermilio Planchon, 1st-instar nymph.
Relate-estimated coalescence rates and allele ages for European beef cattle
<h1>Overview</h1> <p>Coalescence rates and allele ages calculated for five beef cattle breeds (Charolais, Simmental, Limousin, Hereford, Angus) using Relate.</p> <p>We estimated the joint genealogy of 684 individuals, including both <em>Bos taurus</em> and <em>Bos indicus</em>, then extracted the embedded genealogy for the five cattle breeds and re-estimated the population size history and branch lengths.</p> <p>We extracted the embedded genealogy for each of the five beef cattle breeds, jointly estimated the population size history, and re-estimated the branch lengths.</p> <p>Please email bft990914@163.com for any queries.</p> <h1>Coalescence Rates and Allele Ages</h1> <p>The *.coal files record coalescence rates for each of the five cattle breeds.</p> <p>The gzipped files allele_ages_*.gz record allele ages for each of the five cattle breeds.</p>
Central and Northern European caterpillar assemblages show strong phylogenetic structure
<p class="western"><span><span><span>Phylogenetic diversity metrics have been used to tackle an increasing number of questions in ecology and evolutionary biology. Here we present a novel use of phylogenetic diversity metrics namely the investigation of insect herbivore assemblages on select plant species in order to investigate possible drivers shaping the phylogenetic structure of those assemblages.</span></span></span></p> <p class="western"><span><span><span>We investigated the phylogenetic structure of lepidopteran herbivore assemblages on 208 species of central European vascular plants. A dataset of 2553 species of Lepidoptera from 68 families, comprising 8584 individual herbivore-host associations, was analyzed for patterns of phylogenetic α- and β-diversity in relation to plant growth form, plant phylogeny and the accumulation of some characteristic major classes of secondary plant metabolites.</span></span></span></p> <p class="western"><span><span><span>Distinct patterns of phylogenetic β-diversity were detected when plants were partitioned into three growth form categories (graminoid, herbaceous, and woody). In contrast, groupings of plants according to higher taxa or key secondary metabolites did not yield similarly clear patterns. Notable exceptions were assemblages on graminoid plants, especially those containing silica, which could be distinguished by both plant phylogeny and their phytochemical characteristics. Additionally, plants containing highly toxic glucosinolates (all of the family Brassicaceae) harbor highly distinct lepidopteran assemblages. Phylogenetic α-diversity of associated caterpillars differed greatly between graminoid, herbaceous and woody plants. Assemblages on graminoid plants were found to be the most phylogenetically clustered, followed by herbs and woody plants which showed the least degree of phylogenetic clustering. In conclusion, our results indicate that the phylogenetic structure of the investigated herbivore assemblages in the nemoral and boreal zones of the Western Palaearctic region is most heavily influenced by plant growth form while categories derived from higher plant systematics or classifications reflecting secondary metabolites leave far less signal at this macroecological scale.</span></span></span></p> <p class="western"><span><span><span>The approach taken in this study proved to be very successful in identifying patterns in the phylogenetic structure of herbivore assemblages. Our findings are in line with the 'classical' plant apparency hypothesis. Plant secondary compounds were found to have only limited explanatory power on our scale of analysis.</span></span></span></p>
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.