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2024 07 26 Data for MS submitted to Scientific Reports
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reporting guideline of ARRIVE version 2.0 of paper
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RESONANCES Database : Experiment no. 2 — Self-Report Scores
<p>This dataset is an output of the RESONANCES neurophysiological-signal-based testing protocol aimed at recognizing and measuring atmospheric emotions. It contains sociodemographics describing the analyzed sample, self-report scores, and related questionnaires.<br> <br>The dataset is made of six files:<br>no. 1 dataset summary (.pdf)<br>no. 1 database (.xlsx)<br>no. 4 documents (.pdf) embedding the used questionnaires (Appendix01_SREIT; Appendix02_BFI-10; Appendix03_EES; Appendix04_RAQ)</p>
Fig. 4 in A report of 39 unrecorded bacterial species in Korea belonging to the classes Betaproteobacteria and Gammaproteobacteria isolated in 2018
Fig. 4. Neighbor-joining phylogenetic tree, based on 16S rRNA gene sequences, showing the relationship between the strains isolated in this study and their relatives of the orders Aeromonadales, Alteromonadales, Cellvibrionales and Enterobacterales in the class Gammaproteobacteria. Numbers at the nodes are levels of bootstrap value (%) based on 1000 replicated datasets; only values above 70% are shown. Bacillus subtilis subsp. subtilis NCIB 3610T (ABQL01000001) was used as an outgroup. Bar, 0.02 substitutions per nucleotide position.
Fig. 6 in A report of 39 unrecorded bacterial species in Korea belonging to the classes Betaproteobacteria and Gammaproteobacteria isolated in 2018
Fig. 6. Neighbor-joining phylogenetic tree, based on 16S rRNA gene sequences, showing the relationship between the strains isolated in this study and their relatives of the orders Pseudomonadales and Vibrionales in the class Gammaproteobacteria. Numbers at the nodes are levels of bootstrap value (%) based on 1000 replicated datasets; only values above 70% are shown. Bacillus subtilis subsp. subtilis NCIB 3610T (ABQL01000001) was used as an outgroup. Bar, 0.02 substitutions per nucleotide position.
Fig. 2 in A report on 38 unrecorded bacterial species in Korea in the class Gammaproteobacteria
Fig. 2. Transmission electron micrographs of cells of the species in the orders Oceanospirillales, Pseudomonadales, and Vibrionales belonging to the class Gammaproteobacteria in this study. Strain: 1, KYW1820; 2, KYW1809; 3, KYW1985; 4, LPB0278; 5, LPB0279; 6, SCBP1; 7, KYW1748; 8, CAU 1519; 9, CAU 1560; 10, BT58; 11, BT76; 12, BT345; 13, LPB0305; 14, MMS19-T15; 15, F-130; 16, BG108; 17, BG24; 18, BT59; 19, LPB0317; 20, LPB0315; 21, LPB0326.
Figures 5–9 in First report of Monoeca in Argentina, with description of two new species (Hymenoptera: Apidae)
Figures 5–9. Mesosomal and leg structures of species of Monoeca Lepeletier & Audinet-Serville from Argentina. 5. Female mesosoma of Monoeca armata, new species, anterior view showing pointed pronotal lobe and carinate dorsolateral angle of pronotum. 6. Female hind femur and tibia of M. armata, showing inner apical carina of femur (c). 7. Male hind tarsus of M. armata, showing apical tooth-like projection (t) of basitarsus. 8. Outer view of male hind tibia and tarsus of M. armata. 9. Outer view of male hind tibia and tarsus of M. pulchella, new species.
Figures 1–4 in First report of Monoeca in Argentina, with description of two new species (Hymenoptera: Apidae)
Figures 1–4. Males of Monoeca Lepeletier & Audinet-Serville from Argentina. 1. Dorsal view of mesosoma of Monoeca pulchella, new species, holotype. 2. Ventral view of metasoma of M. pulchella, holotype. 3. Dorsal view of mesosoma of M. armata, new species, paratype from Bernardo de Irigoyen, Misiones. 4. Ventral view of metasoma of M. armata, same paratype as in figure 3.
Fig. 4 in A report of 42 unrecorded bacterial species belonging to the Alphaproteobacteria in Korea
Fig. 4. Neighbor-joining phylogenetic tree, based on 16S rRNA gene sequences, showing the phylogenetic relationships between the strains isolated in this study and their relatives of the order Caulobacterales in the class Alphaproteobacteria. Escherichia coli ATCC 11775T (X80725) was used as an outgroup (not shown). Bootstrap values (>70%) are shown above nodes for the neighbor-joining. Scale bar: 0.01 changes per nucleotide.
Fig. 15. Drawida jeholensis Kobayashi, 1940 in Reports of Drawida (Oligochaeta: Moniligastridae) from far East Asia
Fig. 15. Drawida jeholensis Kobayashi, 1940. After Kobayashi (1940: fig. 1) showing (a) male field, (b) enlargement of a spermatheca.
Fig. 18 in Reports of Drawida (Oligochaeta: Moniligastridae) from far East Asia
Fig. 18. Drawida csuzdii sp. nov. Holotype, ventral-view showing prostomium, opened spermatheca in 7/8lhs (with nephridium), testis sac in 9/10lhs with prostate and gland, ovisac from 11-14 and gizzards in 13-16 (with nephridia) plus enlargements of male and spermathecal pores; paratype side-view shows saddle-shaped clitellum.
Fig. 19 in Reports of Drawida (Oligochaeta: Moniligastridae) from far East Asia
Fig. 19. Drawida jeombongsan sp. nov. Holotype (H, DNA HY10) showing ventral anterior, dorsal view of prostomium and prostate gland in 10/11rhs.
Fig. 5 in A report of 42 unrecorded bacterial species belonging to the Alphaproteobacteria in Korea
Fig. 5. Neighbor-joining phylogenetic tree, based on 16S rRNA gene sequences, showing the phylogenetic relationship between the strains isolated in this study and their relatives of the order Sphingomonadales in the class Alphaproteobacteria. Escherichia coli ATCC 11775T (X80725) was used as an outgroup (not shown). Bootstrap values (>70%) are shown above nodes for the neighbor-joining. Scale bar: 0.01 changes per nucleotide.
Fig. 1 in A report of 38 unrecorded bacterial species in Korea, belonging to the phylum Actinobacteria
Fig. 1. Transmission electron micrographs or scanning electron micrographs of cells of the strains isolated in this study. Strains: 1, W2-3- 5; 2, WM31; 3, WS50; 4, WM81; 5, WM69; 6, ST5-11; 7, W2-2-3; 8, 01SU3; 9, W4-2-4; 10, BM14; 11, DT5-10; 12, WM79; 13, WM26; 14, MS4Y-2-4; 15, WW45; 16, JJ9003; 17, MM3; 18, MMD3Y-10-4; 19, TMIL-2; 20, SR5-11; 21, BM24; 22, WM113; 23, HME9262; 24, DR7-12; 25, MMD3Y-15-3; 26, MK6Y-6-1; 27, 03SU14; 28, CDR5; 29, SR4-01; 30, BM28; 31, MMD3Y-15-4; 32, HME9278; 33, DR7- 01; 34, Gsoil012; 35, WW39; 36, WW41; 37, GDM10; 38, CR9.
Fig. 1 in A report of 42 unrecorded bacterial species belonging to the Alphaproteobacteria in Korea
Fig. 1. Transmission electron micrographs or scanning electron micrographs of cells of the strains isolated in this study. The cells were cultured at their optimal growth conditions. Strains: 1, HME9313; 2, SC11; 3, HME9328; 4, SR5-12; 5, GDR2; 6, JJ9005; 7, W4-2-3; 8, W5-3- 2; 9, MS6Y-8-2; 10, CDM27; 11, IMCC19253; 12, JJ9007; 13, CDR12; 14, W2-3-3; 15, IMCC3052; 16, IMCC12052; 17, MMD3Y-10-1; 18, HME9315; 19, SR1-05; 20, BDM25; 21, 01SU1-P; 22, 2013N5; 23, JJ9004; 24, G8; 25, R8-4; 26, MBM3; 27, Gsoil033; 28, WS140; 29, IMCC1933; 30, KEM112; 31, SR1-03; 32, ST6-05; 33, 2013C32; 34, MK6Y-2-1; 35, MS6Y-8-4; 36, F4; 37, HME9308; 38, BS17; 39, JJ9002; 40, PMX-RY; 41,16-4-1; 42, 24-5.
Fig. 1 in First report of the branchiobdellidan Holtodrilus truncatus (Annelida: Clitellata) found on the freshwater atyid shrimp Neocaridina sp. from Korea
Fig. 1. Holtodrilus truncatus (Liang, 1963) from the 'Andeok Valley', Jejudo Province, South Korea. A. whole body (preserved); B. each jaw with a large median tooth and three pairs of small lateral teeth (313/313); C. live specimens of H. truncatus (marked with arrows) on the body surface of the freshwater atyid shrimp, Neocaridina sp. Scale bars: A = 0.5 mm, B = 20 μm.
Figure 1 in Figure 3 in First report of the Ecuadorian deep-sea scorpionfish, Trachyscorpia verai Béarez & Motomura, 2009 (Actinopteri: Scorpaenidae) from Peruvian marine waters
Figure 1. – Belobranchus segura. Live male specimen (EFRM 0079, 78.0 mm SL) collected in the Pisang River, Padang City, West Sumatra Province (Indonesia) (photograph by Ari Wright).
Fig. 5 in A report of 46 unrecorded bacterial species in Korea belonging to the classes Alphaproteobacteria, Betaproteobacteria, Deltaproteobacteria and Epsilonproteobacteria
Fig. 5. Neighbor-joining phylogenetic tree, based on 16S rRNA sequences, showing the phylogenetic relationship between strain LPB0172 isolated in this study and its relatives in the order Desulfovibrionales in the class Deltaproteobacteria. Burkholderia dabaoshanensis GIMN1.004T (FJ210816) was used as an outgroup. Bootstrap values (>70%) are shown above nodes. Scale bar: 0.05 changes per nucleotide.
Fig. 6 in A report of 46 unrecorded bacterial species in Korea belonging to the classes Alphaproteobacteria, Betaproteobacteria, Deltaproteobacteria and Epsilonproteobacteria
Fig. 6. Neighbor-joining phylogenetic tree, based on 16S rRNA sequences, showing the phylogenetic relationship between strain LPB0305 isolated in this study and its relatives in the order Campylobacterales in the class Epsilonproteobacteria. Burkholderia dabaoshanensis GIMN1.004T (FJ210816) was used as an outgroup. Bootstrap values (>70%) are shown above nodes. Scale bar: 0.02 changes per nucleotide.
Fig. 14 in A report of 14 unrecorded bacterial species in Korea isolated in 2017
Fig. 14. Neighbor-joining phylogenetic tree based on 16S rRNA gene sequences shows the relationship between the strains isolated in this study and their relatives of the genus Lysinibacillus. Bootstrap values (>70%) are shown above nodes for the neighbor-joining methods. Bar: 0.0050 substitutions per nucleotide position, respectively.
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.