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Fig. 2 in "Something old, something new, something borrowed, and the oioxeny is true": description of Plectanocotyle jeanloujustinei n. sp. (Polyopisthocotylea, Plectanocotylidae) from the MNHN Helminthology collection with novel molecular and morphological data for P. gurnardi (Van Beneden & Hesse, 1863) (sensu stricto) from Sweden
Fig. 2. Plectanocotyle gurnardi (Van Beneden and Hesse, 1863) sensu stricto ex Eutrigla gurnardus from the North Sea, Sweden, hologenophores, body lacking only a lateral part; excised used for DNA extraction A, (SMNH 216644). B, (SMNH 216645). C, (SMNH 216646).
Fig. 1 in "Something old, something new, something borrowed, and the oioxeny is true": description of Plectanocotyle jeanloujustinei n. sp. (Polyopisthocotylea, Plectanocotylidae) from the MNHN Helminthology collection with novel molecular and morphological data for P. gurnardi (Van Beneden & Hesse, 1863) (sensu stricto) from Sweden
Fig. 1. One of the unstudied specimens of Plectanocotyle gurnardi (Van Beneden and Hesse, 1863) from the type-host Eutrigla gurnardus available for study before this paper, and that hinted the presence of Plectanocotyle gurnardi in Swedish waters of the North Sea. The slide containing two specimens of Plectanocotyle gurnardi labeled as "Phyllocotyle gurnardi": unstudied specimens collected by Theodor Odhner from the gills of Eutrigla gurnardus from Kristineberg, Sweden, Northeast Atlantic.
Fig. 6 in "Something old, something new, something borrowed, and the oioxeny is true": description of Plectanocotyle jeanloujustinei n. sp. (Polyopisthocotylea, Plectanocotylidae) from the MNHN Helminthology collection with novel molecular and morphological data for P. gurnardi (Van Beneden & Hesse, 1863) (sensu stricto) from Sweden
Fig. 6. Plectanocotyle gurnardi (Van Beneden and Hesse, 1863) sensu stricto ex Eutrigla gurnardus from the North Sea, Sweden. A, Body, ventral view (SMNH 216639). B, Clamp, ventral view (SMNH 216593). C, Anterior end showing male copulatory organ, ventral view (SMNH 216586). D, Egg, (SMNH 216594).
Fig. 7 in "Something old, something new, something borrowed, and the oioxeny is true": description of Plectanocotyle jeanloujustinei n. sp. (Polyopisthocotylea, Plectanocotylidae) from the MNHN Helminthology collection with novel molecular and morphological data for P. gurnardi (Van Beneden & Hesse, 1863) (sensu stricto) from Sweden
Fig. 7. Plectanocotyle gurnardi (Van Beneden and Hesse, 1863) sensu stricto ex Eutrigla gurnardus from the North Sea, Sweden, disposition of clamps sclerites. A, Dorsal jaw. B, Ventral jaw. C, Clamp, ventral view (SMNH 216593). 3.2. Morphology
FIGURE 5 in A novel application of the white light/fringe projection duo: recovering high precision three-dimensional images from fossils for the digital preservation of morphology
FIGURE 5. Processed views of a fossil sample acquired by the optical FPP system OTY. Each view is re-oriented 60º degrees with respect to the prior. Where: "a" indicates a zone that has no information at 60º in this stage of the process and will be corrected with the information of the next view, as is shown in "b".
FIGURE 3 in A novel application of the white light/fringe projection duo: recovering high precision three-dimensional images from fossils for the digital preservation of morphology
FIGURE 3. Magnitude maps of the sample obtained every 60º for 8 and 128 pixels/period. The images show the resolution and detail levels given the number of fringes projected over the sample. The measurements' accuracy of surface and depth depends on the number of projected fringes, which include as many as the system can display (8 pixels/period for each fringe in this case). When the acquisition of details is difficult, a wider fringe is required (based on our sample size, we used 128 pixels).
FIGURE 1 in A novel application of the white light/fringe projection duo: recovering high precision three-dimensional images from fossils for the digital preservation of morphology
FIGURE 1. Optical set up specifications for fringe projection profilometry (FPP) used in this study for the recovery of a 3-D image of a hemimandible sample.
FIGURE 7 in A novel application of the white light/fringe projection duo: recovering high precision three-dimensional images from fossils for the digital preservation of morphology
FIGURE 7. Examples of analyses that can be performed with the obtained data from the fossils: 1) denoting the relief (emboss filter), 2) detecting edges and transitions (sobel filter), 3) study of the roughness and waviness of a sample (topography filter).
FIGURE 2 in A novel application of the white light/fringe projection duo: recovering high precision three-dimensional images from fossils for the digital preservation of morphology
FIGURE 2. Flowchart of the 'OTY' procedure employed in this study, where: α = angle (60º in this case), * = MBE algorithm (Gutiérrez-García et al., 2013), and ** = Goldstein algorithm. OTY: name given to the white light system together with the phase shifting algorithm filter, based on the fact that it was developed for use on Ototylomys samples (see main text).
FIGURE 6. Full 3-D in A novel application of the white light/fringe projection duo: recovering high precision three-dimensional images from fossils for the digital preservation of morphology
FIGURE 6. Full 3-D image of the reconstructed fossil after merging all the six views. 1) Cloud of points, 2) Final mesh.
FIGURE 4 in A novel application of the white light/fringe projection duo: recovering high precision three-dimensional images from fossils for the digital preservation of morphology
FIGURE 4. Process applied to recover the topography of the fossil sample. Where: 1) image captured by the CCD of the fringe projection on the sample, 2) wrapped phase obtained of the 8 frames after applying the MBE filter, 3) unwrapped phase map, 4) phase carrier compensation, and 5) surface of one of the views of the fossil recovered.
FIGURE 2 in Imaging of the inner structure of cave bear teeth by novel non-destructive techniques
FIGURE 2. Specimen GS 26-1. Root of a right lower M1 of a senile individual of Ursus ingressus from Gamssulzen cave (Lower Austria). 2.1. Comparison between 3D volume rendering of µ-CT and OCT (ƛc=850 nm) data. 2.2. - 2.4. Axial cross sections of the mesial root by µ-CT at position i)-iii) as depicted in 2.1. The regions marked in red show the area scanned by OCT presented in Figure 3.
FIGURE 1 in Imaging of the inner structure of cave bear teeth by novel non-destructive techniques
FIGURE 1. Orientation of measurement planes with respect to the tooth. The red area signifies the surface area scanned by OCT.
FIGURE 7 in Imaging of the inner structure of cave bear teeth by novel non-destructive techniques
FIGURE 7. Specimen GS 108-2, right lower m1 of a young adult individual of Ursus ingressus from Gamssulzen cave (Lower Austria). Comparison between 7.1. transmitted pulse amplitude, 7.2. time delay of THz measurement and 7.3. µ-CT.
FIGURE 4 in Imaging of the inner structure of cave bear teeth by novel non-destructive techniques
FIGURE 4. Specimen GS 26-1. 4.1. Volume rendering of the 3D µ-CT. The red area marks the region scanned by OCT. 4.2. Sectional view of 3D OCT data. Quicktime format video file of animated OCT scan. 4.3. µ-CT axial crosssectional scans and 4.4. µ-CT en-face scan. Quicktime format video file of animated µ-CT scan.
FIGURE 3 in Imaging of the inner structure of cave bear teeth by novel non-destructive techniques
FIGURE 3. Specimen GS 26-1.Comparison between axial cross-sectional µ-CT and OCT (ƛc=850 nm) images on the distal root at position i-iii, as depicted in Figure 1. 3.1. The cross section close to the collum dentis shows enamel but no annuli. 3.2.-3.3. The cross-sectional images ii) and iii) show annuli.
FIGURE 5 in Imaging of the inner structure of cave bear teeth by novel non-destructive techniques
FIGURE 5. Axial cross-sectional OCT image (ƛc=1300 nm) in the lower third of the tooth radix of specimen. 5.1. GS 26-1 (distal). 5.2. GS 108-1 (mesial). 5.3. GS 108-2 (mesial). The camera images on the left show the OCT scanning region. The OCT images have a lateral dimension of 4 mm. The depth scale bar is stretched according to a refractive index of 1.6, leading to an image depth of about 1mm. The microscope images are 1x1 mm² in true aspect ratio. The depth scale of OCT images and microscope image is identical.
FIGURE 6. 6.1-2 in Imaging of the inner structure of cave bear teeth by novel non-destructive techniques
FIGURE 6. 6.1-2: Comparison between the commercial system at 1300 nm (6.1) and the Lab system at 800 nm (6.2), exemplified by cross-sectional images of the specimen GS 26-1. The arrow in 6.2 indicates a fine structure that cannot be resolved by the 1300 nm system. 6.3-4: Comparison between the commercial system (6.3) and the PS-OCT system at 1500 nm, exemplified by by cross-sectional images of the specimen GS 108-2. 6.4. shows the reflectivity image, and 6.5. the retardation image. The arrow in 6.3 indicates an annual ring, while the arrows in 6.5 indicate birefringence of the tooth.
Fig. 4 in Lactarius indohirtipes and L. sharmai (Russulales, Basidiomycota): two novel species from Jammu and Kashmir, India
Fig. 4. Line drawings of Lactarius indohirtipes K.Verma, Uniyal & Mehmood sp. nov. (CAL 1918). A. Basidia. B. Pleuropseudocystidia. C. Basidiospores. D. Pleuromacrocystidia. E. Transverse section through pileipellis. Scale bars: A–B, D–E = 10 μm; C = 2 μm.
Fig. 6 in Lactarius indohirtipes and L. sharmai (Russulales, Basidiomycota): two novel species from Jammu and Kashmir, India
Fig. 6. Line drawings of Lactarius sharmai K.Verma, Uniyal & Mehmood sp. nov. (CAL 1919). A. Basidia. B. Pleuropseudocystidia. C. Basidiospores. D. Marginal cells. E. Cheiloleptocystidia. F. Transverse section through pileipellis. Scale bars: A–B, D–F = 10 μm; C = 5 μm.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.