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20,299 results for “Systematic”
Describing and mapping of the main existing structures and systematic initiatives and academic activities for surveillance in the EU for zoonoses (transboundary, emerging and re-emerging) in domestic animals and wildlife
<p>These annexes refer to a report which describes and maps the main existing structures and systematic initiatives and academic activities for surveillance in the EU for transboundary, emerging and re-emerging zoonoses in domestic animals, wildlife, and the environment, developed by the different sectors, namely human, domestic animal, wildlife and environmental, under One Health approach. This is essential to provide scientific and technical advice and improve future schemes of surveillance. A questionnaire was compiled by MSs and the information collected was complemented by literature reviews about (i) the main existing structures and systematic initiatives or activities, and (ii) academic activities for surveillance in the EU for zoonoses in domestic animals and wildlife. The annexes to the report are as follows:</p> <p>Annex 1. Questionnaire survey on official zoonotic disease surveillance activities in the EU and neighbouring countries.</p> <p>- Sheet 1: PART 1 – Surveillance. This part explores the general organization of the surveillance plan</p> <p>- Sheet 2: PART 2 – Pathogens. This part aims to identify target pathogen and species and methods for surveillance</p> <p>Annex 2. Characteristic of surveillance plans.</p> <p>- Sheet “Pathogens”, where not primary but also a wide range of hosts are summarized.</p> <p>- Sheet “active/passive surveillance” by country</p> <p>- Sheet “origin of funding” (the proportion and number) of surveillance plans</p> <p>Annex 3. More detailed distribution of active and passive surveillance planaccording to countries and pathogen is presented in this Annex.</p> <p>Annex 4. Standardized data model (to extract key information to characterize the surveillance systems in the literature review on systematic surveillance. The data model was divided into two parts:</p> <p>- Sheet 1: PART 1 – Surveillance system (explores the general organization)</p> <p>- Sheet 2: PART 2 – Pathogens (identifies the target pathogen, species, and methods)</p> <p>Annex 5. Standardized data model used during the literature review to extract key information to characterize the surveillance performed by the academia</p>
Systematic review of reconstruction techniques for accelerated quantitative MRI
<p>The complete list of the papers that were selected in the categorization phase of the review "Systematic review of reconstruction techniques for accelerated quantitative MRI", in combination with the properties that describe them.</p>
Dataset for publication Sikora P., Woliński P., Chougan M., Madraszewski S., Węgrzyński W., Papis B.K., Federowicz K., Ghaffar S.H., Stephan D. A systematic experimental study on biochar-cementitious composites: Towards carbon sequestration. Industrial Crops and Products (2022) 184, 115103
<p>Open Dataset of: TG, XRD data and Origin file (*.opju) of particle size distribution, calorimetry, compressive strength (mortar + paste), water absorption coefficient/open porosity from publication Sikora P., Woliński P., Chougan M., Madraszewski S., Węgrzyński W., Papis B.K., Federowicz K., Ghaffar S.H., Stephan D. A systematic experimental study on biochar-cementitious composites: Towards carbon sequestration. Industrial Crops and Products (2022) 184, 115103. https://doi.org/10.1016/j.indcrop.2022.115103<br> 122758</p>
Text-fig. 3. Conch dimensions used in the systematic descriptions (after Korn 2017). in Late Bashkirian Ammonoids From The Mospyne Formation Of The Donets Basin, Ukraine
Text-fig. 3. Conch dimensions used in the systematic descriptions (after Korn 2017).
Wildlife response to disturbances in agent-based models: synthesis on current development and challenges (Systematic Review)
<p>This dataset was obtained from a systematic screening of 124 articles presenting agent-based models of wildlife response to disturbances. It is part of a manuscript for submission to the journal Methods in Ecology and Evolution. The manuscript is entitled: Wildlife response to disturbances in agent-based models: synthesis on current development and challenges.</p>
Antibiotic versus surgery in the treatment of acute appendicitis in the pregnant population: A systematic review and meta-analysis
<p>Antibiotic versus surgery in the treatment of acute appendicitis in the pregnant population: A systematic review and meta-analysis</p>
Dactylopius opuntiae (Hemiptera: Dactylopiidae) control tactics: a systematic review based on bibliometric analysis.
<p>Bibliographic database containing the excel data used for the tables and figures of the article "Dactylopius opuntiae (Hemiptera: Dactylopiidae) control tactics: a systematic review based on bibliometric analysis" as part of the literature review of the research proyect "Analysis of the protective secretion of <em>D. opuntiae</em> for control purposes"</p> <p>It was proposed to determine the status and emerging trends of scientific production related to control strategies of the specie, using bibliometric indicators.</p>
Data from: Reconciling diverse viewpoints within systematic conservation planning
<ol> <li>Conservation encompasses numerous alternative viewpoints on what to value (features such as biodiversity, ecosystem services or socio-economic benefits) and how to convert these values into conservation policies that deliver for nature and people. Reconciling these differing values and viewpoints in policy development and implementation is a perennial challenge.</li> <li>Balancing differing stakeholder viewpoints within a single conservation plan risks some viewpoints overshadowing others. This can occur as some dominant viewpoints may lead to more marginal views being suppressed, and also through social biases during the planning process.</li> <li>Here we develop four separate 'caricature' conservation viewpoints, and spatially quantify each of them in order to test different approaches to equitable reconciliation. Each viewpoint prioritises different locations, dependent on the extent to which they deliver a variety of different biodiversity, well-being and economic goals.</li> <li>We then show how these different viewpoints can be reconciled using numeric methods. We find that a pluralist approach, which accounts for the spatial similarities and differences between viewpoints, is able to deliver equitably for multiple conservation features. This pluralist approach provides a coherent spatial conservation strategy with the capacity to satisfy advocates of quite divergent approaches to conservation.</li> </ol>
98 selected publications analysed in-depth in the context of a systematic literature review on Computational Thinking in compulsory education
<p>This is the list of the <strong>98 publications from between 2016 and 2021 </strong>analysed in-depth through a review matrix in the context of the <strong>"</strong><a href="https://publications.jrc.ec.europa.eu/repository/handle/JRC128347">Reviewing Computational Thinking in Compulsory Education: State of Play and</a> <a href="https://publications.jrc.ec.europa.eu/repository/handle/JRC128347"> Practices from the Field</a><strong>"</strong> <strong>research study.</strong> The <a href="https://computhink2study.eu/">study</a> was designed, funded, and followed by the European Commission’s Joint Research Centre (JRC) to investigate <strong>how Computational Thinking (CT) is currently positioned within compulsory school education in Europe’s various Member States, as well as outside the EU</strong>. The study was carried out from April to December 2021 by the Institute for Educational Technology of the Italian National Research Council (CNR-ITD), together with European Schoolnet (EUN) and Vilnius University (VU).</p> <p>Bocconi, S., Chioccariello, A., Kampylis, P., Dagienė, V., Wastiau, P., Engelhardt, K., Earp, J., Horvath, M.A., Jasutė, E., Malagoli, C., Masiulionytė-Dagienė, V., & Stupurienė, G. (2022). <em>Reviewing Computational Thinking in Compulsory Education</em>. Publications Office of the European Union. <a href="https://doi.org/10.2760/126955">https://doi.org/10.2760/126955</a></p> <p> </p>
Adaptation in Microservice-based Systems: A Systematic Literature Review
<p>Data extraction from the paper: Adaptation in Microservice-based Systems: A Systematic Literature Review.</p> <p>The attached file contains the result of data extraction from the primary studies following the defined extraction criteria, where: </p> <ul> <li><strong>1</strong>, corresponds to the property option that was identified in the study,</li> <li><strong>NS</strong> denotes that the property was specified in the study, and</li> <li><strong>Ad.</strong> denotes an additional option to the main one identified for that particular property.</li> </ul>
Fig. 1 in Collections-based systematics: Opportunities and outlook for 2050
Fig. 1. The importance of systematic collections in biology and society.
Fig. 2 in Collections-based systematics: Opportunities and outlook for 2050
Fig. 2. The US National Herbarium in Washington, D.C. (US) (photo by Chip Clark).
Records used to compare duplicate detection of three systematic review screener tools
<p>This upload contains records obtained from PubMed, Scopus and Web of Science that were used to compare the sensitivity of the duplicate detection systems of three systematic review screening tools, as well as a custom-made dataset to evaluate the detection of duplicates under various scenarios.</p>
Incidence and influencing factors of occupational pneumoconiosis: A systematic review and meta-analysis
<p><span><strong>Objectives</strong>: </span><span>To determine the incidence of pneumoconiosis worldwide and its influencing factors. </span></p> <p><span><strong>Design</strong>:</span><span> Systematic review and meta-analysis. </span></p> <p><span><strong>Setting</strong>:</span><span> Cohort studies on occupational pneumoconiosis.</span></p> <p><span><strong>Participants</strong>:</span><span> PubMed, Embase, the Cochrane Library, and Web of Science were searched until November 2021. Studies were selected for meta-analysis if they involved at least one variable investigated as an influencing factor for the incidence of pneumoconiosis and reported either the parameters and 95% confidence intervals (CIs) of the risk fit to the data, or sufficient information to allow for the calculation of those values. </span></p> <p><span><strong>Primary outcome measures</strong>:</span><span> The </span><span>pooled incidence of pneumoconiosis and risk ratio (RR) and 95% CIs of influencing factors. </span></p> <p><span><strong>Results</strong>:</span><span> Our meta-analysis included 19 studies with a total of 335,424 participants, of whom 29,972 developed pneumoconiosis. The pooled incidence of pneumoconiosis was 0.093 (95% CI: 0.085~0.135). We identified the following influencing factors: (1) male (RR=3.74; 95%CI 1.31–10.64; P=0.01), (2) smoking (RR=1.80; 95%CI 1.34</span><span>–</span><span>2.43; P=0.0001), (3) tunneling category (RR=4.75; 95%CI 1.96</span><span>–</span><span>11.53; P<0.0001), (4) helping category (RR=0.07; 95%CI 0.13</span><span>–</span><span>0.16; P<0.0001), </span><span>(5) age (the highest incidence occurs between the ages of 50 and 60), </span><span>(6) duration of dust exposure ((RR=4.59, 95% CI 2.41</span><span>–</span><span>8.74, P<0.01), (7) cumulative total dust exposure (CTD) (RR=34.14, 95% CI 17.50</span><span>–</span><span>66.63, P<0.01). A dose-response analysis revealed a significant positive linear dose-response association between the risk of pneumoconiosis and duration of exposure and CTD (P-nonlinearity=0.10, P-nonlinearity=0.16; respectively). The Pearson correlation analysis revealed that silicosis incidence was highly correlated with CSE (r=0.794, P<0.001).</span></p> <p><span><strong>Conclusion</strong>:</span><span> The incidence of pneumoconiosis in occupational workers was 0.093 and seven factors were found to be associated with the incidence, providing some insight into the prevention of pneumoconiosis.</span></p> <p><span>PROSPERO registration number: CRD42022323233.</span></p> <p><span>Abbreviations:</span><span> NOS: Newcastle Ottawa Scale, CWP: Coal Worker's Pneumoconiosis, CTD: cumulative total dust exposure, CSE: cumulative silica exposure.</span></p>
The relative effectiveness of different grassland restoration methods: A systematic literature search and meta-analysis
<p>1. Active grassland restoration has gained in importance to mitigate the dramatic decline of farmland biodiversity. While there is evidence that such operations are generally effective in promoting plant diversity, little is known about the effectiveness of the different methods applied. Restoration methods can differ in intensity of seed bed preparation, seed source and technique of seed application.</p> <p>2. In this systematic literature search and meta-analysis, we screened the literature for studies of the restoration of mesic grasslands in temperate Europe. We focused on active restoration experiments that included a treatment and lasted more than three years. We evaluated the influence of restoration factors on plant species richness relative to non-restored controls.</p> <p>3. We found 187 articles that investigated the outcome of operations aimed at actively restoring mesic temperate grasslands. Most articles focused on plants, with only 9.6% dealing with other organisms (e.g. beetles, pollinating insects). Many papers had to be excluded due to incomplete data, too short study duration and/or lack of an adequate control. This resulted in 13 articles fulfilling our criteria for inclusion, yielding a total of 56 data points for the meta-analysis.</p> <p>4. Restoration actions increased plant species richness by, on average, 17.4%, compared to controls. The seed source explained a significant amount of variation in plant species richness: seeds originating from a speciose donor grassland had a positive effect. This effect was even enhanced when combined with a commercial seed mix, whereas commercial seed mixes alone had no significant effect. We did not observe any effect of other factors, such as the type of seed bed preparation or the seed application method.</p> <p>5. A seed-source obtained from species-rich grasslands seems to be key to efficient grassland restoration in mesic grasslands of temperate Europe. Even though seeds from a speciose donor grassland should be preferred over commercial seeds, associating natural and commercial seed mixes increases plant species richness. This systematic literature search further revealed two major research gaps in grassland restoration ecology: a deficit in long-term investigations as well as a deficit in studies focusing on non-plant organisms.</p>
Impact of irradiation on the adhesive performance of resin-based dental biomaterials: a systematic review of laboratory studies
<p>BibTeX file of the electronic searches that were conduced in five databases, Cochrane Library, Embase, OpenGrey through DANS, PubMed, and Web of Science, on 10/01/2023. </p>
Dataset of papers Effects of Salinity on the Formation of Rainbow Fish Embryos (Melanotaenia Parva): A Systematic Review
<p>This is the dataset of the study. It consist:</p> <p>1. PRISMA checklist</p> <p>2. List of sample papers from Pubmed using for this study </p> <p>3. List of figures </p>
Phylogenetic systematics, diversification, and biogeography of Cerurinae (Lepidoptera: Notodontidae) and a description of a new genus
<p>We present the first dated molecular phylogeny of the Cerurinae moths (Notodontidae), based on sequence data for 666 loci generated by anchored hybrid enrichment. Monophyly of Cerurinae is corroborated, which includes the following genera: <em>Pararethona</em> Janse, <em>Pseudorethona</em> Janse, <em>Oreocerura</em> Kiriakoff, <strong>stat. rev.</strong>, <em>Cerurella</em> Kiriakoff, <em>Notocerura</em> Kiriakoff, <em>Hampsonita</em> Kiriakoff, <em>Afrocerura</em> Kiriakoff, <em>Cerurina</em> Kiriakoff, <em>Neoharpyia</em> Daniel, <em>Furcula</em> Lamarck, <em>Neocerura</em> Matsumura, <em>Americerura</em> St Laurent and Goldstein, <strong>gen. nov.</strong>, <em>Cerura</em> Schrank, and <em>Kamalia</em> Koçak & Kemal. The type species of the Neotropical genus <em>Tecmessa</em> Burmeister, <em>T. annulipes</em> (Berg), which had been incorrectly assigned to Cerurinae, is recovered in Heterocampinae; and <em>Americerura</em> <strong>gen. nov.</strong> is proposed to receive 17 unambiguously cerurine species transferred from <em>Tecmessa</em>. Divergence time estimates recover a crown age of Notodontidae roughly coincident with the K-Pg boundary and a late-Oligocene crown age for Cerurinae. An African origin is inferred for Cerurinae, followed by colonization of the Palearctic, the Americas, Indomalaya, and Australasia during the Miocene. At least three independent colonizations of the Americas are inferred, one in the mid-Miocene associated with ancestral <em>Americerura</em> <strong>gen. nov. </strong>and two in the Pliocene and Pleistocene within <em>Furcula</em>. We hypothesize that the global spread of Cerurinae was enabled by that of its primary caterpillar foodplants in the Salicaceae. State-dependent diversification analyses suggest that cerurines diversified most rapidly in temperate climates.</p>
datasets for A systematic approach to study protein-substrate specificity enables the identification of Ssh1 substrate range
<p>datasets for A systematic approach to study protein-substrate specificity enables the identification of Ssh1 substrate range</p>
Dataset of systematic literature review of paper "Analysis of The Impact of Heat Stress on Embryo Development"
<p>This the dataset of the paper. It included</p> <p>1. Abstract of papers</p> <p>2. Details of papers</p> <p>3. PRISMA checklist </p>
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.