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FIGURE 8.Phenogram for 9 in Leaf micromorphology and anatomy in the tribe Aristideae (Poaceae) in Iran and its systematic implications
FIGURE 8.Phenogram for 9 species of Stipagrostis and 3 species of Aristida from cluster analysis based on Ward method using 6 qualitative anatomical traits; the vertical dashed lineindicates similarity coefficient.
FIGURE 4 in Leaf micromorphology and anatomy in the tribe Aristideae (Poaceae) in Iran and its systematic implications
FIGURE 4. Leaf cross section of the Aristideae species showing leaf margin: A: Aristida coerulescens, B: A. abnormis, C: Stipagrostis paradisea, D:S. obtusa, E:S. pennata, F: S. plumosa, G: S. barbata, H:S. raddiana, I: S. ciliatta, J: S. pogonoptela, (Sc:sclerenchyma, Pr: Prickle). Scale bar=0.3 mm
FIGURE 7 in Pollen morphology of selected taxa of Valeriana (Caprifoliaceae): taxonomic and evolutionary implications
FIGURE 7. Box plots illustrating the variation of polar axis (A) and equatorial diameter (B) of Valeriana pollen grains. 1. V. montana. 2. V. tripteris. 3. V. supina. 4. V. transsilvanica. 5. V. pyrenaica. 6. V. dioica. 7. V. simplicifolia. 8. V. wolgensis. 9. V. stolonifera. 10. V. angustifolia. 11. V. sambucifolia. 12. V. officinalis. 13. V. exaltata. 14. V. grossheimii. 15. V. rossica. 16. V. tuberosa. 17. V. alliariifolia.
FIGURE 4 in Pollen morphology of selected taxa of Valeriana (Caprifoliaceae): taxonomic and evolutionary implications
FIGURE 4. Pollen grains of Valeriana (LM). A–D. V. montana. E–H. V. tripteris. I–L. V. supina. M–P. V. pyrenaica. Q–T. V. transsilvanica. A, B, E, F, I, J, M, N, Q, R. Equatorial view. C, D, G, H, K, L, O, P, S, T. Polar view. Scale bars: 10 µm.
FIGURE 1 in Pollen morphology of selected taxa of Valeriana (Caprifoliaceae): taxonomic and evolutionary implications
FIGURE 1. Pollen grains of Valeriana (SEM). A. V. montana. B. V. tripteris. C. V. supina. D. V. pyrenaica. E, F. V. transsilvanica. G. V. dioica. H. V. simplicifolia. I. V. wolgensis. J. V. officinalis. K. V. exaltata. L. V. sambucifolia. M. V. angustifolia. N. V. stolonifera. O. V. grossheimii. P. V. rossica. Q. V. tuberosa. R. V. alliariifolia. A, C, F, I, K–O, Q, R. Polar view. B, D, E, G, H, J, P. Equatorial view. Scale bars: 10 µm, except in H: 5 µm.
FIGURE 6 in Pollen morphology of selected taxa of Valeriana (Caprifoliaceae): taxonomic and evolutionary implications
FIGURE 6. Pollen grains of Valeriana (LM). A–D. V. angustifolia. E–H. V. stolonifera. I–L. V. grossheimii. M–P. V. rossica. Q–T. V. tuberosa. U–X. V. alliariifolia. A, B, E, F, I, J, M, N, Q, R, U, V. Equatorial view. C, D, G, H, K, L, O, P, S, T, W, X. Polar view. Scale bars: 10 µm.
FIGURE 3 in Pollen morphology of selected taxa of Valeriana (Caprifoliaceae): taxonomic and evolutionary implications
FIGURE 3. Exine structure of pollen grains of Valeriana (SEM). A. V. montana. B. V. tripteris. C. V. pyrenaica. D, E. V. rossica. F. V. simplicifolia. G–I. V. alliariifolia. A–D, F, G. Columellae in mesocolpia. E, H. Columellae in apocolpia. I. Colpus with halo.
FIGURE 5 in Pollen morphology of selected taxa of Valeriana (Caprifoliaceae): taxonomic and evolutionary implications
FIGURE 5. Pollen grains of Valeriana (LM). A–D. V. dioica. E–H. V. simplicifolia. I–L. V. wolgensis. M–P. V. officinalis. Q–T. V. exaltata. U–X. V. sambucifolia. A, B, E, F, I, J, M, N, Q, R, U, V. Equatorial view. C, D, G, H, K, L, O, P, S, T, W, X. Polar view. Scale bars: 10 µm.
FIGURE 8 in Pollen morphology of selected taxa of Valeriana (Caprifoliaceae): taxonomic and evolutionary implications
FIGURE 8. UPGMA dendrograms showing the relationships of pollen grains of Valeriana species. A. Quantitative characters. B. Qualitative characters.
FIGURE 2 in Pollen morphology of selected taxa of Valeriana (Caprifoliaceae): taxonomic and evolutionary implications
FIGURE 2. Exine sculpture of pollen grains of Valeriana (SEM). A. V. montana. B. V. tripteris. C. V. supina. D. V. pyrenaica. E, F. V. transsilvanica. G. V. dioica. H. V. simplicifolia. I. V. wolgensis. J. V. officinalis. K. V. exaltata. L. V. sambucifolia. M. V. angustifolia. N. V. stolonifera. O. V. grossheimii. P. V. rossica. Q. V. tuberosa. R. V. alliariifolia.
The Effects of Aerosol on Small-Scale Cloud-Environment Mixing: Implications for Observing Inhomogeneous Mixing
<p>This is the simulation output of the submitted manuscript "The Effects of Aerosol on Small-Scale Cloud-Environment Mixing: Implications for Observing Inhomogeneous Mixing" to the Journal of Geophysical Research: Atmospheres. </p> <p>Abstract: The mixing of clouds with their environment can change the size and number of cloud droplets, two important parameters to understand the role of clouds in the climate system. Because these changes are determined by the way a cloud mixes with its environment, they have been used to characterize the mixing process. Using a highly detailed numerical cloud model coupled with a statistical turbulence model, we show that the adequate consideration of aerosol particles from which cloud droplets grow, can alter the changes of cloud droplets during mixing. This has not been considered in the past. We identify biases that need to be considered when mixing processes are analyzed.</p> <p>The raw data presented here was produced by the aforementioned model only and is completely available.</p>
Supplementary material 1 from: Wei Z, Huang X, Shi A (2023) First mitochondrial genome of subfamily Julodinae (Coleoptera, Buprestidae) with its phylogenetic implications. ZooKeys 1139: 165-182. https://doi.org/10.3897/zookeys.1139.96216
First mitochondrial genome of subfamily Julodinae (Coleoptera, Buprestidae) with its phylogenetic implications
Determinants of Smallholder Farmers Technical Efficiency of Bread Wheat Production and Implications of Seed Recycling in Ethiopia: The Stochastic Frontier Approach
<p>This is a survey data gathered from two districts of East Gojam Zone, Ethiopia for a study entitled with "Determinants of Smallholder Farmers Technical Efficiency of Bread Wheat Production and Implications of Seed Recycling in Ethiopia: The Stochastic Frontier Approach"</p>
Data from: Tracing the origin of Oriental beech stands across Western Europe and reporting hybridization with European beech – implications for assisted gene flow
<p>The benefits and risks of human-aided translocation of individuals within the species range, assisted gene flow (AGF), depend on the genetic divergence, on the rate and direction of hybridization, and on the climate transfer distance between the host and donor populations. In this study, we explored the use of Oriental beech (<em>Fagus</em> <em>sylvatica</em> subsp. <em>orientalis</em>), growing from Iran to the Balkans, for AGF into European beech populations (<em>F</em>. <em>sylvatica</em> subsp. <em>Sylvatica</em>) that increasingly suffer from climate warming. Using samples from natural populations of Oriental and European beech and microsatellite loci, we identified 5 distinct genetic clusters in Oriental beech with a divergence (FST) of 0.15 to 0.25 from European beech. Using this knowledge, we traced the origin of 11 Oriental beech stands in Western Europe established during the 20<sup>th</sup> century. In two stands of Greater Caucasus origin, we found evidence for extensive hybridization, with 18% and 41% of the seedlings having hybrid status. Climate data revealed higher seasonality with warmer and drier summers across the native Oriental beech sites in comparison to the planting sites in Western Europe. Accordingly, we found that bud burst of Oriental beech occurred four days earlier than in European beech. Overall, our results suggest that AGF of Oriental beech could increase the genetic diversity of European beech stands and may foster introgression of variants adapted to expected future climatic conditions. Our study showcases the evaluation of the benefits and risks of AGF and call for similar studies on other native tree species.</p>
FIGURE 8 in Revised Species Delimitation in the Giant Water Lily Genus Victoria (Nymphaeaceae) Confirms a New Species and Has Implications for Its Conservation
FIGURE 8 | Geographical context with population genomic and phylogenomic results. (A) Geographical coordinates of all Victoria samples used in analyses, where symbols are color-coded according to morphotype/species and symbol type denotes data source. (B) Phylogenomic representation of relationships between plastomes of 15 Victoria samples, with Nymphaea ampla as the outgroup and constructed using RAxML. (C) Principal component analysis of Victoria nuclear
FIGURE 2 in Revised Species Delimitation in the Giant Water Lily Genus Victoria (Nymphaeaceae) Confirms a New Species and Has Implications for Its Conservation
FIGURE 2 | Flower morphology and terms, using a Victoria amazonica second-night flower in longitudinal section for reference (above) and a fully dissected flower (below). (A) Ovary, (B) stigmatic surface and stigmatic chamber, (C) locule and ovules, (D) floral apex, (E) outer tepals, (F) inner tepals, (G) outer staminodia, (H) stamens, (I) inner staminodia, (J) carpellary appendages. Illustration and photo: Lucy T. Smith
Potential clinical implications of CD4+CD26high T cells for nivolumab treated melanoma patients
<table> <tbody> <tr> <td> <p>Background Nivolumab is an anti-PD1 antibody that has dramatically improved metastatic melanoma patients’ outcomes. Nevertheless, many patients are resistant to PD-1 inhibition, occasionally experiencing severe off-target immune toxicity. In addition, no robust and reproducible biomarkers have yet been validated to identify the correct selection of patients who will benefit from anti-PD-1 treatment avoiding unwanted side effects. However, the strength of CD26 expression on CD4+ T lymphocytes permits the characterization of three subtypes with variable degrees of responsiveness to tumors, suggesting that the presence of CD26-expressing T cells in patients might be a marker of responsiveness to PD-1-based therapies. </p> <p>Methods The frequency distribution of peripheral blood CD26-expressing cells was investigated employing multi-parametric flow cytometry in 69 metastatic melanoma patients along with clinical characteristics and blood count parameters at baseline (W0) and compared to 20 age- and sex-matched healthy controls. Percentages of baseline CD4+CD26high T cells were correlated with the outcome after nivolumab treatment. In addition, the frequency of CD4+CD26high T cells at W0 was compared with those obtained after 12 weeks (W1) of therapy in a sub-cohort of 33 patients.</p> <p>Results Circulating CD4+CD26high T cells were significantly reduced in melanoma patients compared to healthy subjects (p<0.001). In addition, a significant association was observed between a low baseline percentage of CD4+CD26high T cells (<7.3%) and clinical outcomes, measured as overall survival (p=0.010) and progression-free survival (p=0.014). Moreover, patients with clinical benefit from nivolumab therapy had significantly higher frequencies of circulating CD4+CD26high T cells than patients with non-clinical benefit (p=0.004) at 12 months. Also, a higher pre-treatment proportion of circulating CD4+CD26high T cells was correlated with Disease Control Rate (p=0.014) and best Overall Response Rate (p=0.009) at 12 months. Interestingly, after 12 weeks (W1) of nivolumab treatment, percentages of CD4+CD26 high T cells were significantly higher in comparison with the frequencies measured at W0 (p < 0.0001), aligning the cell counts with the ranges seen in the blood of healthy subjects.</p> <p>Conclusions Our study firstly demonstrates that peripheral blood circulating CD4+CD26high T lymphocytes represent potential biomarkers whose perturbations are associated with reduced survival and worse clinical outcomes in melanoma patients.</p> <p> </p> </td> </tr> </tbody> </table>
Gravity Anomalies and Implications for Shallow Mantle Processes of the Western Cocos-Nazca Spreading Center
<p>This folder contains six grid files and one Matlab code from Zheng et al. (2022). </p> <p><br> (1)105W95W1S5N_mba.grd -- mantle Bougour anomaly calculated in this study (displayed in Fig. 1c).</p> <p>(2)105W95W1S5N_mba_ship_topo_global_FAA.grd -- Calculated mantle Bougour anomaly using mutltibeam bathymetry and global free air anomaly data (displayed in Fig. S1b).</p> <p>(3)105W95W1S5N_mba_global_topo_global_FAA.grd -- Calculated mantle Bougour anomaly using global bathymetry and global free air anomaly data (displayed in Fig. S1c).</p> <p>(4)105W95W1S5N_thermal_1k.grd -- thermal effect caused by plate cooling (displayed in Fig. S2b).</p> <p>(5)105W95W1S5N_rmba_1k.grd -- residual mantle Bougour anomaly (displayed in Fig. 2a).</p> <p>(6)105W95W1S5N_crust_1k.grd -- relative crustal thickness (displayed in Fig. 2b).</p> <p>(7)fig4_filtered_model.m -- Matlab code for producing filtered model in Fig. 4 </p>
Data for "Turbulent drag at the ice-ocean interface of Europa in simulations of rotating convection: Implications for nonsynchronous rotation of the ice shell"
<p>Data files and python Jupyter notebook to reproduce Figures 2 - 6 from the manuscript "Turbulent drag at the ice-ocean interface of Europa in simulations of rotating convection: Implications for nonsynchronous rotation of the ice shell".</p> <p>Contents:</p> <p>Package</p> <p>--EuropaOceanTorque.ipynb - Jupyter Notebook to load and analyse data. Reproduces figures 1-2 from the manuscript.<br> --cs510 - Grid info files<br> --mitgcm_vis - plotting and interpolation functions<br> --Results - directory for all data files<br> --Setup<br> ----runx - input files for running MITgcm<br> ----code - mods for compiling the MITgcm</p>
Globally Distributed Subducted Materials along the Earth's Core-Mantle Boundary: Implications for Ultra-low Velocity Zones
<p>Supplemental movie files related to the geodynamic models in our manuscript "Globally Distributed Subducted Materials along the Earth’s Core-Mantle Boundary: Implications for Ultra-low Velocity Zones"</p>
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.