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779
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ShareScore release 0.9.0
Dataset results
779 results for “CTCF”
Myeloid leukemia dependency MYNRL15 exemplifies class of CTCF-bound lncRNA loci [ATAC-Seq]
GEO Series GSE172235. Homo sapiens. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
in situ Hi-C in WT and CTCF depleted mouse livers
GEO Series GSE179170. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Dynamic CTCF occupancy during differentiation rewires cis-regulatory module interactions essential for development [ChIP-seq]
GEO Series GSE131052. Homo sapiens. 32 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Cohesin and CTCF control chromosomal contact dynamics in living cells
GEO Series GSE197238. Mus musculus. 17 samples. Type: Other.
Role of the cellular factor CTCF in the regulation of Bovine Leukemia Virus latency and three-dimensional chromatin organization [4C-seq]
GEO Series GSE178483. Ovis aries. 12 samples. Type: Other.
The essential role of CTCF binding site at TAD boundaries in modulating Ifng locus chromatin interactions and transcriptional regulation [ChIP-seq]
GEO Series GSE300739. Mus musculus. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Systematic assessment of ISWI subunits reveals that NURF creates local accessibility for CTCF
GEO Series GSE234295. Mus musculus. 124 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other; Methylation profiling by high throughput sequencing.
Role of the cellular factor CTCF in the regulation of Bovine Leukemia Virus latency and three-dimensional chromatin organization
GEO Series GSE178484. Ovis aries. 20 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other.
RNA-Seq and GRO-seq on MCF7 cells induced with sgRNA vectors targeting CTCF binding elements
GEO Series GSE124575. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing; Other.
Chromatin-bound RB targets promoters, enhancers, and CTCF-bound loci.
GEO Series GSE176035. Homo sapiens. 59 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
CTCF distribution around AsisI sites in IDHwt and IDHR132H DIvA cells
GEO Series GSE283196. Homo sapiens. 117 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other.
CTCF translates IL-2- and aKG-sensitive metabolic changes in T cells into context-dependent differentiation gene programs
GEO Series GSE89722. Mus musculus. 96 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Batf pioneers the reorganization of chromatin in developing effector T cells via Ets1-dependent recruitment of Ctcf [ChIP-seq]
GEO Series GSE123198. Mus musculus. 69 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
CTCF is a Barrier for Totipotent-like Reprogramming
GEO Series GSE165162. Mus musculus. 28 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other.
Three-dimensional analysis of genome organization in CTCF-WT and CTCF-KO dendritic cells (RNA-seq)
GEO Series GSE185881. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
Loss of the Ash2l subunit of histone H3K4 methyltransferase complexes promotes chromatin compaction at promoters [ChIP-seq CTCF]
GEO Series GSE205231. Mus musculus. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
The lncRNA DUBR is regulated by CTCF and coordinates chromatin landscape and gene expression in hematopoietic cells [ChIRP-Seq]
GEO Series GSE268501. Homo sapiens. 6 samples. Type: Other.
Facultative CTCF sites moderate mammary super-enhancer activity and regulate juxtaposed gene in non-mammary cells [ChIP-seq]
GEO Series GSE92587. Mus musculus. 30 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Rapid depletion of the cohesin subunits and CTCF reveals their role in maintaining high-order genome architecture [ATAC-seq]
GEO Series GSE181846. Mus musculus. 10 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
The establishment of a CTCF activity reporter for systematic stratification of CTCF binding sites
GEO Series GSE240678. Mus musculus. 4 samples. Type: Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.