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Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
520
datasets available to search
ShareScore release 0.9.0
Dataset results
520 results for “Host interactions”
Malaria Host Pathogen Interaction Center Experiment 25: Host and parasite gene transcript abundances, from whole blood, of Macaca mulatta infected Plasmodium cynomolgi strain ceylonensis treated with
GEO Series GSE104330. Macaca mulatta; Plasmodium cynomolgi ceylonensis. 25 samples. Type: Expression profiling by high throughput sequencing.
Dual-transcriptomic analysis of human nasal transcriptome and microbiome reveals host-bacteria interactions associated with symptomatic respiratory infection [RNA-Seq]
GEO Series GSE309130. Homo sapiens. 149 samples. Type: Expression profiling by high throughput sequencing.
Hydra modifies bacterial quorum sensing signals for stabilizing host-microbe interactions
GEO Series GSE81281. Curvibacter sp. AEP1.3. 15 samples. Type: Expression profiling by high throughput sequencing.
A resilient mutualistic interaction between cucumber mosaic virus and its natural host Arabidopsis halleri to adapt to an environmental change
GEO Series GSE197739. Arabidopsis halleri. 12 samples. Type: Expression profiling by high throughput sequencing.
Cas9 interactions with host RNAs and transposable elements impair neurodevelopment (CUT&Tag)
GEO Series GSE161633. Homo sapiens. 16 samples. Type: Other.
Malaria Host Pathogen Interaction Center Experiment 04: Host and parasite gene transcript abundances, from whole blood, of Macaca mulatta infected Plasmodium cynomolgi treated with artemether over 7 t
GEO Series GSE99486. Macaca mulatta; Plasmodium cynomolgi strain B. 30 samples. Type: Expression profiling by high throughput sequencing.
Cas9 interactions with host RNAs and transposable elements impair neurodevelopment (RNA-seq)
GEO Series GSE161634. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
Spatial transcriptomics revealing host-microbe interactions
GEO Series GSE210738. mouse gut metagenome; Mus musculus. 10 samples. Type: Other.
Cas9 interactions with host RNAs and transposable elements impair neurodevelopment
GEO Series GSE161635. Homo sapiens. 26 samples. Type: Other; Expression profiling by high throughput sequencing.
Dual-transcriptomic analysis of human nasal transcriptome and microbiome reveals host-bacteria interactions associated with symptomatic respiratory infection (16S validation)
GEO Series GSE309134. Homo sapiens. 53 samples. Type: Other.
Dual transcriptomics of host-pathogen interaction of neonatal sepsis/meningitis causing isolate Cronobacter turicensis z3032 with zebrafish larvae
GEO Series GSE236051. Danio rerio. 4 samples. Type: Expression profiling by high throughput sequencing.
Malaria Host Pathogen Interaction Center Experiment 23R: Host and parasite gene transcript abundances, from whole blood, of Macaca mulatta infected Plasmodium cynomolgi B strain treated with artemethe
GEO Series GSE104223. Macaca mulatta; Plasmodium cynomolgi strain B. 48 samples. Type: Expression profiling by high throughput sequencing.
Host pathogen interaction at a transcriptional level
GEO Series GSE13405. Homo sapiens. 17 samples. Type: Expression profiling by array.
Cas9 interactions with host RNAs and transposable elements impair neurodevelopment (irCLIP-seq)
GEO Series GSE161632. Homo sapiens. 2 samples. Type: Other.
Senescence of tumor-specific Non-Classic Monocytes Facilitates Immune Suppression and Prostate Cancer Progression through Tumor and Host Immune Interactions
GEO Series GSE288749. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
In Vitro Culture of the Insect Endosymbiont Spiroplasma poulsonii Highlights Bacterial Genes Involved in Host-Symbiont Interaction
GEO Series GSE112290. Spiroplasma poulsonii. 6 samples. Type: Expression profiling by high throughput sequencing.
Malaria Host Pathogen Interaction Center Experiment 03: Host and parasite gene transcript abundance measures from bone marrow for Macaca mulatta infected with Plasmodium coatneyi Hackeri strain from 7
GEO Series GSE103042. Macaca mulatta; Plasmodium coatneyi. 35 samples. Type: Expression profiling by high throughput sequencing.
Elucidating Host-Pathogen Interaction in Acute Systemic Candidiasis in a Mouse Model Using Genomic Approach
GEO Series GSE16339. Mus musculus. 14 samples. Type: Expression profiling by array.
High Resolution Spatial Mapping of Microbiome-Host Interactions via in situ Polyadenylation and Spatial RNA Sequencing [Ileum, with in situ Polyadenylation]
GEO Series GSE277197. Mus musculus. 1 samples. Type: Other.
Histone lactylation during host–pathogen interaction: An intimate and persistent affair between Pseudomonas aeruginosa quorum-sensing signaling and host lactate [CUT&RUN]
GEO Series GSE302326. Mus musculus. 16 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.