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3,583 results for “elevations”
Zonation of mangrove flora and fauna in a subtropical estuarine wetland based on surface elevation
<p>In the context of sea-level rise (SLR), an understanding of the spatial distributions of mangrove flora and fauna is required for effective ecosystem management and conservation. These distributions are greatly affected by tidal inundation, and surface elevation is a reliable quantitative indicator of the effects of tidal inundation. Most recent studies have focused exclusively on the quantitative relationships between mangrove-plant zonation and surface elevation, neglecting mangrove fauna. Here, we measured surface elevation along six transects through the mangrove forests of a subtropical estuarine wetland in Zhenzhu Bay (Guangxi, China), using a real-time kinematic global positioning system. We identified the mangrove plants along each transect and investigated the spatial distributions of arboreal, epifaunal, and infaunal molluscs, as well as infaunal crabs, using traditional quadrats. Our results indicated that 97.3% of all mangrove forests in the bay were distributed within the 400–750 m intertidal zone, between the local mean sea level and mean high water (119 cm above mean sea level). Mangrove plants exhibited obvious zonation patterns, and different species tended to inhabit different niches along the elevation gradient: <i>Aegiceras corniculatum</i> dominated in seaward locations while <i>Lumnitzera racemosa</i> dominated in landward areas. Mangrove molluscs also showed distinct patterns of spatial zonation correlated with surface elevation, independent of life-form and season; the spatial distributions of some molluscs were influenced by the relative abundances of certain mangrove plants. In contrast, the spatial distributions of crabs in the bay were not correlated with surface elevation. To the best of our knowledge, this is the first study to explicitly quantify the influences of surface elevation on the spatial distributions of mangrove fauna in the intertidal zone. This characterization of the vertical ranges of various flora and fauna in mangrove forests provides a basic framework for future studies aimed at predicting changes in the structure and functions of mangrove forests in response to SLR.</p>
Data from: Leaf nutrients, not specific leaf area, are consistent indicators of elevated nutrient inputs
Leaf traits are frequently measured in ecology to provide a 'common currency' for predicting how anthropogenic pressures impact ecosystem function. Here, we test whether leaf traits consistently respond to experimental treatments across 27 globally distributed grassland sites across 4 continents. We find that specific leaf area (leaf area per unit mass)—a commonly measured morphological trait inferring shifts between plant growth strategies—did not respond to up to four years of soil nutrient additions. Leaf nitrogen, phosphorus and potassium concentrations increased in response to the addition of each respective soil nutrient. We found few significant changes in leaf traits when vertebrate herbivores were excluded in the short-term. Leaf nitrogen and potassium concentrations were positively correlated with species turnover, suggesting that interspecific trait variation was a significant predictor of leaf nitrogen and potassium, but not of leaf phosphorus concentration. Climatic conditions and pretreatment soil nutrient levels also accounted for significant amounts of variation in the leaf traits measured. Overall, we find that leaf morphological traits, such as specific leaf area, are not appropriate indicators of plant response to anthropogenic perturbations in grasslands.
Data from: Land-use change interacts with climate to determine elevational species redistribution
Climate change is driving global species redistribution with profound social and economic impacts. However, species movement is largely constrained by habitat availability and connectivity, of which the interaction effects with climate change remain largely unknown. Here we examine published data on 2798 elevational range shifts from 43 study sites to assess the confounding effect of land-use change on climate-driven species redistribution. We show that baseline forest cover and recent forest cover change are critical predictors in determining the magnitude of elevational range shifts. Forest loss positively interacts with baseline temperature conditions, such that forest loss in warmer regions tends to accelerate species' upslope movement. Consequently, not only climate but also habitat loss stressors and, importantly, their synergistic effects matter in forecasting species elevational redistribution, especially in the tropics where both stressors will increase the risk of net lowland biotic attrition.
Panmixia across elevation in thermally sensitive Andean dung beetles
Janzen's seasonality hypothesis predicts that organisms inhabiting environments with limited climatic variability will evolve a reduced thermal tolerance breadth compared with organisms experiencing greater climatic variability. In turn, narrow tolerance breadth may select against dispersal across strong temperature gradients, such as those found across elevation. This can result in narrow elevational ranges and generate a pattern of isolation-by-environment, or neutral genetic differentiation correlated with environmental variables that is independent of geographic distance. We tested for signatures of isolation-by-environment across elevation using genome-wide SNP data from five species of Andean dung beetles (subfamily Scarabaeinae) with well-characterized, narrow thermal physiologies and narrow elevational distributions. Contrary to our expectations, we found no evidence of population genetic structure associated with elevation and little signal of isolation-by-environment. Further, elevational ranges for four of five species appear to be at equilibrium and show no evidence of demographic constraints at range limits. Taken together, these results suggest physiological constraints on dispersal may primarily operate outside of a stable realized niche, and point to a lower bound on the spatial scale of local adaptation.
Datasets - Evolutionary history, not ecogeographic rules, explains size variation of tropical insects along elevational gradients
<p>One of the best-known biogeographic rules for ectotherms is the temperature-size rule, which asserts that ectotherms produce smaller adults at warmer temperatures. Although this is often true, it has become clear that there is no single process behind the pattern and many exceptions to the rule. To disentangle such complex temperature-size relationships, individual clades must be examined at ecological and evolutionary scales.</p> <p>We examined temperature-size relationships for 2106 individuals from 64 populations and 40 species of <i>Cephaloleia</i> rolled-leaf beetles (Chrysomelidae; Cassidinae)<b> </b>occurring along two tropical elevational gradientss: Barva and the Talamanca Cordillera in Costa Rica, Central America. We tested whether the temperature-size rule applied to interspecific elevational assemblages, intraspecific elevational populations, or different rearing temperatures for individual populations.</p> <p>At the interspecific scale, evolutionary history, rather than elevation, explains body size. At the intraspecific scale, only one of seven species followed the temperature-size rule across elevations. When larvae were reared at different temperatures, only one of five populations followed the temperature-size rule. Most populations grew to a fixed size regardless of temperature.</p> <p>Size in <i>Cephaloleia</i> beetles is constrained by their evolutionary history and responds to factors that rarely correlate with temperature. As temperature increases, ectotherms will not universally shrink, but determining if and why their size will change will require further investigation.</p> <p>Here we provide the following datasets used to determine effects of temperature on insect body size at population and community levels: <i>Supplement S1.</i> Body length for 2106 individuals representing 64 populations from 40 species of <i>Cephaloleia </i>rolled-leaf beetle along the Barva and Talamanca elevational gradients, Costa Rica<i>. Supplement S2.</i> Intraspecific differences in length for 798 individuals from seven <i>Cephaloleia </i>species present at multiple life zone<i>.</i><i> Supplement S3.</i> Effects of developmental temperatures on <i>Cephaloleia </i>adult size in 968 individuals from four species and five populations reared in the laboratory at temperatures between 10 and 35 °C.</p>
Environmental determinants of leaf-litter ant community composition along an elevational gradient
Ant communities are extremely diverse and provide a wide variety of ecological functions in tropical forests. Here we investigated the abiotic factors driving ant composition turnover across an elevational gradient at Mont Itoupé, French Guiana. Mont Itoupé is an isolated mountain whose top is covered by cloud forests, a biogeographical rarity that is likely to be threatened according to climate change scenarios in the region. We examined the influence of six soil, climatic and LiDAR-derived vegetation structure variables on leaf-litter ant assembly (267 species) across nine 0.12-ha plots disposed at three elevations (ca. 400, 600 and 800m asl). We tested (a) whether species co-occurring within a same plot or a same elevation were more similar in terms of taxonomic, functional and phylogenetic composition, than species from different plots/elevations, and (b) which environmental variables significantly explained compositional turnover among plots. We found that the distribution of species and traits of ant communities along the elevational gradient was significantly explained by a turnover of environmental conditions, particularly in soil phosphorus and sand content, canopy height and mean annual relative humidity of soil. Our results shed light on the role exerted by environmental filtering in shaping ant community assembly in tropical forests. Identifying the environmental determinants of ant species distribution along tropical elevational gradients could help predicting the future impacts of global warming on biodiversity organization in vulnerable environments such as cloud forests.
Data and code from: Vector demography, dispersal, and the spread of disease: Experimental epidemics under elevated resource supply
1. The spread of many diseases depends on the demography and dispersal of arthropod vectors. Classic epidemiological theory typically ignores vector dynamics and instead makes the simplifying assumption of frequency-dependent transmission. Yet vector ecology may be critical for understanding the spread of disease over space and time and how disease dynamics respond to environmental change. 2. Here, we ask how environmental change shapes vector demography and dispersal, and how these traits of vectors govern the spatiotemporal spread of disease. 3. We developed disease models parameterized by traits of vectors and fit them to experimental epidemics. The experiment featured a viral pathogen (CYDV-RPV) vectored by aphids (Rhopalosiphum padi) among populations of grass hosts (Avena sativa) under two rates of environmental resource supply (i.e., fertilization of the host). We compared a non-spatial model that ignores vector movement, a lagged dispersal model that emphasizes the delay between vector reproduction and dispersal, and a travelling wave model that generates waves of infections across space and time. 4. Resource supply altered both vector demography and dispersal. The lagged dispersal model fit best, indicating that vectors first reproduced and then dispersed among hosts in the experiment. Elevated resources decreased vector population growth rates, nearly doubled their carrying capacity per host, increased dispersal rates when vectors carried the virus, and homogenized disease risk across space. 5. Together, the models and experiment show how environmental eutrophication can shape spatial disease dynamics – for example, homogenizing disease risk across space – by altering the demography and behavior of vectors.
Positive and negative interspecific interactions between coexisting rice planthoppers neutralize the effects of elevated temperatures
Global warming is often predicted to increase damage to plants through direct effects on insect herbivores. However, the indirect impacts of rising temperatures on herbivores, mediated through interactions with their biotic environment, could dampen these effects. Using a series of reciprocal density experiments with gravid females and developing nymphs, we examined interspecific competition between two coexisting phloem feeders, Nilaparvata lugens (BPH) and Sogatella furcifera (WBPH), on rice at 25°C and 30°C. WBPH performed better (i.e., adults survived longer, nymphs developed faster and grew larger) at 25°C and BPH (i.e., nymphs developed faster) at 30°C. However, contrary to predictions, WBPH had a greater effect in reducing oviposition and nymph performance in BPH at 30°C. A decoupling of resource use by WBPH and its antagonistic effects on BPH at the higher temperature suggests that WBPH feeding induces host defenses that reduce BPH fitness (i.e., interference competition). Meanwhile, BPH facilitated WBPH oviposition at 30°C and facilitated WBPH nymph performance at 25 and 30°C. Greater facilitation of feeding in WBPH nymphs by BPH at high densities suggests that mechanical damage and host responses to damage increased the fitness of the heterospecific nymphs. Although BPH also facilitated egg-laying by WBPH, intra- and interspecific crowding countered this facilitation at both temperatures. Simulated life tables for planthoppers at 25 and 30°C depicted significantly lower offspring numbers on rice infested by WBPH alone and from mixed BPH-WBPH infestations than from infestations by BPH alone. Our results indicate how interference competition – mediated through host plant defenses - can increase ecosystem resilience to the warmer temperatures predicted under global climate change.
Speciation and gene flow across an elevational gradient in New Guinea kingfishers
<p>Closely related species with parapatric elevational ranges are ubiquitous in tropical mountains worldwide. The gradient speciation hypothesis proposes that these series are the result of <i>in situ </i>ecological speciation driven by divergent selection across elevation. Direct tests of this scenario have been hampered by the difficulty inferring the geographic arrangement of populations at the time of divergence. In cichlids, sticklebacks, and <i>Timema </i>stick insects, support for ecological speciation driven by other selective pressures has come from demonstrating parallel speciation, where divergence proceeds independently across replicated environmental gradients. Here, we take advantage of the unique geography of the island of New Guinea to test for parallel gradient speciation in replicated populations of <i>Syma</i> kingfishers that show extremely subtle differentiation across elevation and between historically isolated mountain ranges. We find that currently described high elevation and low elevation species have reciprocally monophyletic gene trees and form nuclear DNA clusters, rejecting this hypothesis. However, demographic modeling suggests selection has likely maintained species boundaries in the face of gene flow following secondary contact. We compile evidence from the published literature to show that while <i>in situ</i> gradient speciation in labile organisms such as birds appears rare, divergent selection and post-speciation gene flow may be an underappreciated force in the origin of elevational series and tropical beta diversity along mountain slopes.</p>
High elevation increases the risk of Y chromosome loss in Alpine skink populations with sex reversal
<p>The view genotypic sex determination (GSD) and environmental sex determination (ESD) are mutually exclusive states has been contradicted by the discovery that chromosomal sex and environmental influences can co-exist within the same species, hinting at a continuum of intermediate states. Systems where genes and the environment interact to determine sex present the opportunity for sex reversal to occur, where the phenotypic sex is the opposite of that predicted by their sex chromosome complement. The skink Bassiana duperreyi has XX:XY sex chromosomes with sex reversal of the XX genotype to a male phenotype in response to exposure to cold incubation temperatures. Here we studied the frequency of sex reversal in B. duperreyi in response to climatic variation, using elevation as a surrogate for environmental temperatures. We demonstrate sex reversal for the first time in free-ranging adults of a reptile species with XX/XY sex determination. The highest frequency of sex reversal occurred at the highest elevation location, Mount Ginini (18.64%) and decreases in frequency with elevation. We model the impact of this under Fisher's frequency dependent selection to show that, only at the highest elevations, populations risk the loss of the Y chromosome and a transition to TSD. This study contributes to our understanding of the risks of extinction from climate change in species subject to sex reversal by temperature, and will provide focus for future research to test on-the-ground management strategies to mitigate the effects of climate in local populations.</p> <div> <div> <div class="msocomtxt"> <p class="MsoCommentText"> </p> </div> </div> </div>
Elevated atmospheric concentrations of CO2 increase endogenous immune function in a specialist herbivore
<p>1. Animals rely on a balance of endogenous and exogenous sources of immunity to mitigate parasite attack. Understanding how environmental context affects that balance is increasingly urgent under rapid environmental change. In herbivores, immunity is determined, in part, by phytochemistry which is plastic in response to environmental conditions. Monarch butterflies, <i>Danaus plexippus,</i> consistently experience infection by a virulent parasite, <i>Ophryocystis elektroscirrha</i>, and some medicinal milkweed (<i>Asclepias</i>) species, with high concentrations of toxic steroids (cardenolides), provide a potent source of exogenous immunity. 2. We investigated plant-mediated influences of elevated CO<sub>2</sub> (eCO<sub>2</sub>) on endogenous immune responses of monarch larvae to infection by <i>O. elektroscirrha</i>. Recently, transcriptomics have revealed that infection by <i>O. elektroscirrha </i>does not alter monarch immune gene regulation in larvae, corroborating that monarchs rely more on exogenous than endogenous immunity. However, monarchs feeding on medicinal milkweed grown under eCO<sub>2</sub> lose tolerance to the parasite, associated with changes in phytochemistry. Whether changes in milkweed phytochemistry induced by eCO<sub>2</sub> alter the balance between exogenous and endogenous sources of immunity remains unknown. 3. We fed monarchs two species of milkweed; <i>A. curassavica</i> (medicinal) and <i>A. incarnata </i>(non-medicinal) grown under ambient CO<sub>2</sub> (aCO2) or eCO<sub>2</sub>. We then measured endogenous immune responses (phenoloxidase activity, hemocyte concentration, and melanization strength), along with foliar chemistry, to assess mechanisms of monarch immunity under future atmospheric conditions. 4. The melanization response of late-instar larvae was reduced on medicinal milkweed in comparison to non-medicinal milkweed. Moreover, the endogenous immune responses of early-instar larvae to infection by <i>O. elektroscirrha</i> were generally lower in larvae reared on foliage from aCO<sub>2</sub> plants and higher in larvae reared on foliage from eCO<sub>2</sub> plants. When grown under eCO<sub>2</sub>, milkweed plants exhibited lower cardenolide concentrations, lower phytochemical diversity, and lower nutritional quality (higher C:N ratios). Together, these results suggest that the loss of exogenous immunity from foliage under eCO<sub>2</sub> results in increased endogenous immune function. 5. Animal populations face multiple threats induced by anthropogenic environmental change. Our results suggest that shifts in the balance between exogenous and endogenous sources of immunity to parasite attack may represent an underappreciated consequence of environmental change. </p>
The interacting effect of habitat amount, habitat diversity and fragmentation on insect diversity along elevational gradients.
Aim: Elevational gradients are a useful approach to evaluate how environmental factors affect animal diversity. Decades of studies on the elevation-diversity gradient have revealed that this gradient varies greatly with taxa and geographic regions. One potential explanation for this may be the dependence of the relationship on landscape features. We explore the impact of fragmentation, habitat diversity and habitat amount on insect diversity (alpha and beta) and abundance along elevational gradients. We hypothesize that insect diversity and abundance will relate negatively with elevation, but positively with these landscape features. We also hypothesize that landscape features will interact in a way that the positive effect of a given variable on insect diversity may be offset by the others. Location: Reunion Island (Indian Ocean) Taxon: The insect order thrips (Thysanoptera) Methods: Insects were sampled along replicated elevational gradients, and at each sampling plot landscape features and abiotic variables were estimated within buffers surrounding the site. Insect alpha diversity was estimated using abundance-based rarefaction methods, whereas beta diversity was estimated calculating the "local contributions to beta diversity" metric. The effect of elevation, rainfall, landscape features and their interactions was assessed on insect alpha and beta diversity and abundance during two consecutive seasons using linear mixed effects models. Results: We found that thrips alpha and beta diversity was negatively related with elevation, but the relationship varied between seasons and rainfall regimes. Among the different landscape features considered, we found that habitat amount had the strongest effect on diversity. The effect of habitat amount on diversity, however, was offset in areas of low habitat (or land cover) diversity. Main conclusions: Generalizing the factors that underlie the elevation diversity gradient has become a cornerstone in ecological theory because it can help to understand the impact of human activities on diversity. Here we show that taking landscape information into account may help to fulfil this objective because landscape effects co-vary with elevation with often intricate consequences for diversity.
Elevation filters seed traits and germination strategies in the eastern Tibetan Plateau
<p><span><span><span><span><span><span><span><span><span><span><span>Seeds are the colonizing propagules for many plants and may therefore contribute to the filtering of species during the process of colonization and community assembly. Environmental filtering of seed traits may occur among species and influence community composition, or within species and influence the environmental breadth that a given species inhabits. To test for evidence of such filtering of seed traits, we measured morphological and germination traits of seeds of 408 angiosperm species collected across an elevational gradient in the eastern Tibetan Plateau grasslands. We tested for elevational filtering of traits at the species level, as well as within 22 of those species that occurred at different elevations, in order to test whether within-species variation reflected among-species patterns. Elevational patterning occurred in both seed morphology and seed germination. Seeds were smaller, more elongated, and had a higher surface area:volume ratio and shorter germination times at higher elevation. Seed morphology was associated with germination such that more elongated and smaller seeds with a higher surface area:volume ratio germinated faster, leading to earlier germination in seeds from high elevation. Within species, elevational variation in seed traits was observed in several species, but species differed in how those traits were distributed across elevation. These results suggest that taxonomic differences in seed traits may contribute to elevational variation in the species composition of plant communities, but that seed traits may be variably selected by elevation within species.</span></span></span></span></span></span></span></span></span></span></span></p>
Legacy effects of fish but not elevation influence lake ecosystem response to environmental change
<p>How communities reorganize during climate change depends on the distribution of diversity within ecosystems and across landscapes. Understanding how environmental and evolutionary history constrain community resilience is critical to predicting shifts in future ecosystem function. </p> <p>The goal of our study was to understand how communities with different histories respond to environmental change with regard to shifts in elevation (temperature, nutrients) and introduced predators. We hypothesized that community responses to the environment would differ in ways consistent with local adaptation and initial trait structure. </p> <p>We transplanted plankton communities from lakes at different elevations with and without fish in the Sierra Nevada Mountains in California to mesocosms at different elevations with and without fish. We examined the relative importance of the historical and experimental environment on functional (size structure, effects on lower trophic levels), community (zooplankton composition, abundance, and biomass), and population (individual species abundance and biomass) responses.</p> <p>Communities originating from different elevations produced similar biomass at each elevation despite differences in species composition; that is, the experimental elevation, but not the elevation of origin, had a strong effect on biomass. Conversely, we detected a legacy effect of predators on plankton in the fishless environment. <em>Daphnia pulicaria</em> that historically coexisted with fish reached greater biomass under fishless conditions than those from fishless lakes, resulting in greater zooplankton community biomass and larger average size. </p> <p>Therefore, trait variation among lake populations determined the top-down effects of fish predators. In contrast, phenotypic plasticity and local diversity were sufficient to maintain food web structure in response to changing environmental conditions associated with elevation. </p>
Coastal Digital Elevation Models and Transects of the Reef Island Fuvahmulah, the Maldives
<p>The data contains <strong>two Digital Elevation Models</strong> (DEMs) of the coastal zone in the south-east of <strong>Fuvahmulah, the Maldives</strong> (location: latitude -0.30° and longitude 73.43°). DEM files are in the file format <em>*.tif</em> (raster data georeferenced to WGS84). The DEMs contain elevation data on the area adjacent to the seaport. One DEM was measured in 2017, the other in 2019. The 2017 DEM is based on aerial imagery, recorded with the consumer-grade unmanned aerial vehicle (UAV, or drone) DJI Phantom 4 in 2017, while the 2019 DEM was recorded with a DJI Phantom 4 Pro. The data was then processed in <em>Agisoft Photoscan</em> with a Structure-from-Motion - MultiView Stereo algorithm (SfM-MVS).<br> <br> In addition, the data set contains <strong>elevation</strong> and <strong>location data</strong> of 4 transects from sections along the east coast of Fuvahmulah. The data is stored in <em>*.csv </em>files, containing longitude, latitude, height and distance.<br> <br> Finally, there are two further data files with <strong>gridded topographic and bathymetric data</strong>, ready for use in the depth-integrated <strong>Boussinesq type model <em>BOSZ</em></strong> (see Roeber and Cheung, 2012; doi.org/10.1016/j.coastaleng.2012.06.001). Currently, the numerical wave model, incorporates lateral wave makers, so that the elevation data needs to be rotated to account for different wave directions <span class="math-tex">\(\theta\)</span>. The bathymetry was recorded with a <em>Dr. Fahrentholz LituBox 15/200</em> and truncated to 200 meters water depth. The coastal topography results from coastal DEMs, while the island's mainland is set to about 2-3 meters (no elevation information was available for the island's inland area). The data was gridded and interpolated onto the grid with <em>The Generic Mapping Tools (GMT)</em>. The grid size is 7.5 x 7.5 meter.<br> The files are in <em>MATLAB® 5.0</em> file format <em>*.mat</em>, containing the variables '<em>length</em>' and '<em>width</em>' of the domain in meters, '<em>X</em>' and '<em>Y</em>' (computation grid <span class="math-tex">\(x, y\)</span> in degrees <span class="math-tex">\(^\circ\)</span> longitude and latitude), as well as '<em>BATHY</em>', being the elevation data for the X,Y grid. In addition, friction values as used in the model is stored in the variable '<em>Friction</em>', as well as the grid increments '<em>DX</em>' and '<em>DY</em>' (<span class="math-tex">\(\Delta x\)</span> and <span class="math-tex">\(\Delta y\)</span> in degrees <span class="math-tex">\(^\circ\)</span> longitude and latitude).</p> <p>Each folder contains either a README-file or Jupyter Notebook (Python 3). The Notebooks allow the user to access and view the files (Python 3 and Jupyter Notebook installation required)</p>
Weather variation affects the dispersal of grasshoppers beyond their elevational ranges
<p><span><span><span><span><span><span><span><span><span><span><span>Understanding how abiotic conditions influence dispersal patterns of organisms is important for understanding the degree to which species can track and persist in the face of changing climate. </span></span></span></span></span></span></span></span></span></span></span><span><span><span><span><span><span><span><span><span><span><span><span><span>The goal of this study was to understand how weather conditions (temperature, precipitation and wind patterns) influence the dispersal patterns of multiple non-migratory grasshopper species from lower elevation grassland habitats in which they complete their life-cycles to higher elevations that extend beyond their range limits. The study also explored the role of weather factors (temperature and precipitation) in influencing the population sizes of species found at lower elevations. </span></span></span></span></span></span></span></span></span></span></span></span></span></p>
The timing of leaf senescence relates to flowering phenology and functional traits in 17 herbaceous species along elevational gradients
1. Leaf senescence is a major event in a plant's life history as autumn marks the end of the growing season. The optimal timing of leaf senescence is crucial to both, minimize risks of low temperature events and maximize carbon gain during the growing season. As abiotic conditions are currently changing at unprecedented rates, it is important to study how leaf senescence of different species is responding to these changes in order to forecast future growing season length and carbon sequestration potentials. In contrast to flowering phenology, data on autumn events is scarce and even more so for herbaceous than for woody plants, thus more information on this phenological stage is urgently needed. 2. We studied leaf senescence of 632 populations from 17 herbaceous species located along elevational gradients. We focussed on the beginning (5% of the population senesce, LS5) and peak (50% senesce, LS50) of leaf senescence. To see whether we can predict species-specific changes, we studied the link between LS5 and LS50 and flowering phenology as well as leaf functional traits related to plant performance. We looked at first and last flowering day and flowering duration as well as the traits specific leaf area, leaf dry matter content, area based leaf nitrogen and carbon content, carbon isotope discrimination (Δ13C), and the stomatal pore area index. 3. We found species-specific slopes of the beginning of leaf senescence along the elevational gradient. The peak of leaf senescence was uniformly delayed with increasing elevation across all species. Flowering phenology as well as leaf functional traits had a close relationship with leaf senescence and thus can be used to forecast species-specific responses to changes in abiotic conditions. High SLA and high leaf nitrogen were related to earlier senescence while high LDMC, high Δ13C and high SPI to later senescence. 4. Synthesis: The link between senescence, flowering phenology and plant functional traits will help to fine-tune predictions of future growing season length and ecosystem function. To date, most analyses are based on spring phenology and traits, for which data is more abundant than data on autumn senescence.
Elevated temperature increases genome-wide selection on de novo mutations
<p>Adaptation in new environments depends on the amount of genetic variation available for evolution, and the efficacy by which natural selection discriminates among this variation. However, whether some ecological factors reveal more genetic variation, or impose stronger selection pressures than others, is typically not known. Here, we apply enzyme kinetic theory to show that rising global temperatures are predicted to intensify natural selection throughout the genome by increasing the effects of DNA sequence variation on protein stability. We test this prediction by i) estimating temperature-dependent fitness effects of induced mutations in seed beetles adapted to ancestral or elevated temperature, ii) calculate 100 paired selection estimates on mutations in benign versus stressful environments from unicellular and multicellular organisms. Environmental stress per se did not increase mean selection on de novo mutation, suggesting that the cost of adaptation does not generally increase in new ecological settings to which the organism is maladapted. However, elevated temperature increased the mean strength of selection on genome-wide polymorphism, signified by increases in both mutation load and mutational variance in fitness. These results have important implications for genetic diversity gradients and the rate and repeatability of evolution under climate change.</p>
Elevated rates of positive selection drive the evolution of pestiferousness in the Colorado potato beetle ( Leptinotarsa decemlineata, Say)
<p class="Paragraph">In order to understand the evolution of pestiferousness, which we define as the accumulation of traits that contribute to an insect population's success in an agroecosystem, we tested the importance of known genomic properties associated with rapid adaptation. Within the leaf beetle genus <i>Leptinotarsa</i>, only the Colorado potato beetle (CPB), <i>Leptinotarsa decemlineata</i> Say, and a few populations therein, has risen to pest status on cultivated nightshades, <i>Solanum</i>. Using whole genomes from ten closely related <i>Leptinotarsa</i> species native to the United States we reconstructed a high-quality species tree and used this phylogenetic framework to assess evolutionary patterns in four genomic features of rapid adaptation: standing genetic variation, gene family expansion and contraction, transposable element variation, and positive selection at protein coding genes. Throughout approximately 20 million years of history, <i>Leptinotarsa</i> species show little evidence of gene family turnover and transposable element variation. However, there is a clear pattern of recently derived lineages, including CPB, experiencing higher rates of positive selection on protein coding genes. We determine these rates are associated with greater standing genetic variation due to larger effective population size, which support the theory that the demographic history contributes to rates of protein evolution. Furthermore, we identify a suite of genes under positive selection that are linked to pestiferousness, exclusively, in the Colorado potato beetle lineage. They are involved in the biological processes of xenobiotic detoxification, chemosensation, and hormone function.</p>
Exposure to exogenous egg cortisol does not rescue juvenile Chinook salmon body size, condition, or survival from the effects of elevated water temperatures
<p class="NormalThesis">Climate change is leading to altered temperature regimes which are impacting aquatic life, particularly for ectothermic fish. The impacts of environmental stress can be translated across generations through maternally-derived glucocorticoids, leading to altered offspring phenotypes. Although these maternal stress effects are often considered negative, recent studies suggest this maternal stress signal may prepare offspring for a similarly stressful environment (environmental match). We applied the environmental match hypothesis to examine whether a prenatal stress signal can dampen the effects of elevated water temperatures on body size, condition, and survival during early development in Chinook salmon <i>Oncorhynchus tshawytscha</i> from Lake Ontario, Canada. We exposed fertilized eggs to prenatal exogenous egg cortisol (1000ng*mL<sup>-1</sup> cortisol or 0ng*mL<sup>-1</sup> control) and then reared these dosed groups at temperatures indicative of current (+0°C) and future (+3°C) temperature conditions. Offspring reared in elevated temperatures were smaller and had a lower survival at the hatchling developmental stage. Overall, we found that our exogenous cortisol dose did not dampen effects of elevated rearing temperatures (environmental match) on body size or early survival. Instead, our eyed stage survival indicates that our prenatal cortisol dose may be detrimental, as cortisol-dosed offspring raised in elevated temperatures had lower survival than cortisol-dosed and control reared in current temperatures. Our results suggest that a maternal stress signal may not be able to ameliorate the effects of thermal stress during early development. However, we highlight the importance of interpreting the fitness impacts of maternal stress within an environmentally relevant context.</p>
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.