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11,177
datasets available to search
ShareScore release 0.9.0
Dataset results
11,177 results for “identify”
Natural history specimens collected and/or identified and deposited.
Natural history specimen data collected and/or identified by Thomas David Aubinn, <a href="http://www.wikidata.org/entity/Q113553984">http://www.wikidata.org/entity/Q113553984</a>. Claims or attributions were made on Bionomia, <a href="http://bionomia.net">https://bionomia.net</a> using specimen data from the Global Biodiversity Information Facility, <a href="https://gbif.org">https://gbif.org</a>.
Natural history specimens collected and/or identified and deposited.
Natural history specimen data collected and/or identified by Hormasji Maneckji Chibber, <a href="http://www.wikidata.org/entity/Q123676471">http://www.wikidata.org/entity/Q123676471</a>. Claims or attributions were made on Bionomia, <a href="http://bionomia.net">https://bionomia.net</a> using specimen data from the Global Biodiversity Information Facility, <a href="https://gbif.org">https://gbif.org</a>.
Natural history specimens collected and/or identified and deposited.
Natural history specimen data collected and/or identified by Georg Martienssen, <a href="http://www.wikidata.org/entity/Q115483200">http://www.wikidata.org/entity/Q115483200</a>. Claims or attributions were made on Bionomia, <a href="http://bionomia.net">https://bionomia.net</a> using specimen data from the Global Biodiversity Information Facility, <a href="https://gbif.org">https://gbif.org</a>.
Natural history specimens collected and/or identified and deposited.
Natural history specimen data collected and/or identified by Daniel William Coquillett, <a href="http://www.wikidata.org/entity/Q3701756">http://www.wikidata.org/entity/Q3701756</a>. Claims or attributions were made on Bionomia, <a href="http://bionomia.net">https://bionomia.net</a> using specimen data from the Global Biodiversity Information Facility, <a href="https://gbif.org">https://gbif.org</a>.
Natural history specimens collected and/or identified and deposited.
Natural history specimen data collected and/or identified by Elliott Coues, <a href="http://www.wikidata.org/entity/Q714759">http://www.wikidata.org/entity/Q714759</a>. Claims or attributions were made on Bionomia, <a href="http://bionomia.net">https://bionomia.net</a> using specimen data from the Global Biodiversity Information Facility, <a href="https://gbif.org">https://gbif.org</a>.
Natural history specimens collected and/or identified and deposited.
Natural history specimen data collected and/or identified by John B. Perona, <a href="http://www.wikidata.org/entity/Q123938378">http://www.wikidata.org/entity/Q123938378</a>. Claims or attributions were made on Bionomia, <a href="http://bionomia.net">https://bionomia.net</a> using specimen data from the Global Biodiversity Information Facility, <a href="https://gbif.org">https://gbif.org</a>.
DoubleChEC program to identify transcription factor binding sites from mapped ChEC-seq data
<p>ChIP-seq (chromatin immunoprecipitation followed by sequencing) is commonly used to identify genome-wide protein-DNA interactions. However, ChIP-seq often gives a low yield, which is not ideal for quantitative outcomes. An alternative method to ChIP-seq is ChEC-seq (Chromatin endogenous cleavage with high-throughput sequencing). In this method, the endogenous TF (transcription factor) of interest is fused with MNase (micrococcal nuclease) that non-specifically cleaves DNA near binding sites. Compared to the <a href="https://www.nature.com/articles/ncomms9733" rel="nofollow">original ChEC-seq method</a>, the <a href="https://sites.northwestern.edu/bricknerlab/" rel="nofollow">modified version</a> requires far less amplification. Since <a href="https://github.com/macs3-project/MACS/tree/master#introduction">MACS3</a> failed to identify peaks in data generated from the modified ChEC-seq method, a new peak finder has been developed specifically for it.</p> <p>There are three functions in the <em><code>peak_finder/</code></em>. <code>callpeaks()</code> is used to identify peaks from BAM files. <code>goanalysis()</code> is used to make GO (Gene Ontology) term plots from peaks. <code>bedtomeme()</code> is a wrapper function to perform <a href="https://meme-suite.org/meme/tools/meme" rel="nofollow">MEME analysis</a> in R <strong>after <a href="https://meme-suite.org/meme/doc/download.html" rel="nofollow">MEME Suite</a> is installed locally</strong>.</p>
Natural history specimens collected and/or identified and deposited.
Natural history specimen data collected and/or identified by Graziela Barroso, <a href="http://www.wikidata.org/entity/Q1791098">http://www.wikidata.org/entity/Q1791098</a>. Claims or attributions were made on Bionomia, <a href="http://bionomia.net">https://bionomia.net</a> using specimen data from the Global Biodiversity Information Facility, <a href="https://gbif.org">https://gbif.org</a>.
Natural history specimens collected and/or identified and deposited.
Natural history specimen data collected and/or identified by Mary DeDecker, <a href="http://www.wikidata.org/entity/Q66782149">http://www.wikidata.org/entity/Q66782149</a>. Claims or attributions were made on Bionomia, <a href="http://bionomia.net">https://bionomia.net</a> using specimen data from the Global Biodiversity Information Facility, <a href="https://gbif.org">https://gbif.org</a>.
Natural history specimens collected and/or identified and deposited.
Natural history specimen data collected and/or identified by Ralph Evelyn Drake-Brockman, <a href="http://www.wikidata.org/entity/Q110222595">http://www.wikidata.org/entity/Q110222595</a>. Claims or attributions were made on Bionomia, <a href="http://bionomia.net">https://bionomia.net</a> using specimen data from the Global Biodiversity Information Facility, <a href="https://gbif.org">https://gbif.org</a>.
Natural history specimens collected and/or identified and deposited.
Natural history specimen data collected and/or identified by David S. Shetter, <a href="http://www.wikidata.org/entity/Q123986242">http://www.wikidata.org/entity/Q123986242</a>. Claims or attributions were made on Bionomia, <a href="http://bionomia.net">https://bionomia.net</a> using specimen data from the Global Biodiversity Information Facility, <a href="https://gbif.org">https://gbif.org</a>.
Natural history specimens collected and/or identified and deposited.
Natural history specimen data collected and/or identified by George C. Steyskal, <a href="http://www.wikidata.org/entity/Q23068701">http://www.wikidata.org/entity/Q23068701</a>. Claims or attributions were made on Bionomia, <a href="http://bionomia.net">https://bionomia.net</a> using specimen data from the Global Biodiversity Information Facility, <a href="https://gbif.org">https://gbif.org</a>.
Natural history specimens collected and/or identified and deposited.
Natural history specimen data collected and/or identified by Adolfo Targioni Tozzetti, <a href="http://www.wikidata.org/entity/Q2616343">http://www.wikidata.org/entity/Q2616343</a>. Claims or attributions were made on Bionomia, <a href="http://bionomia.net">https://bionomia.net</a> using specimen data from the Global Biodiversity Information Facility, <a href="https://gbif.org">https://gbif.org</a>.
Natural history specimens collected and/or identified and deposited.
Natural history specimen data collected and/or identified by Ole Lie, <a href="http://www.wikidata.org/entity/Q107920126">http://www.wikidata.org/entity/Q107920126</a>. Claims or attributions were made on Bionomia, <a href="http://bionomia.net">https://bionomia.net</a> using specimen data from the Global Biodiversity Information Facility, <a href="https://gbif.org">https://gbif.org</a>.
Natural history specimens collected and/or identified and deposited.
Natural history specimen data collected and/or identified by Armando Reis Moura, <a href="http://www.wikidata.org/entity/Q33685641">http://www.wikidata.org/entity/Q33685641</a>. Claims or attributions were made on Bionomia, <a href="http://bionomia.net">https://bionomia.net</a> using specimen data from the Global Biodiversity Information Facility, <a href="https://gbif.org">https://gbif.org</a>.
Natural history specimens collected and/or identified and deposited.
Natural history specimen data collected and/or identified by Jean Barry Bobear, <a href="http://www.wikidata.org/entity/Q124021851">http://www.wikidata.org/entity/Q124021851</a>. Claims or attributions were made on Bionomia, <a href="http://bionomia.net">https://bionomia.net</a> using specimen data from the Global Biodiversity Information Facility, <a href="https://gbif.org">https://gbif.org</a>.
Natural history specimens collected and/or identified and deposited.
Natural history specimen data collected and/or identified by Herbert Habeeb, <a href="http://www.wikidata.org/entity/Q21514457">http://www.wikidata.org/entity/Q21514457</a>. Claims or attributions were made on Bionomia, <a href="http://bionomia.net">https://bionomia.net</a> using specimen data from the Global Biodiversity Information Facility, <a href="https://gbif.org">https://gbif.org</a>.
Natural history specimens collected and/or identified and deposited.
Natural history specimen data collected and/or identified by Gaston C.A. Delevoy, <a href="http://www.wikidata.org/entity/Q123677008">http://www.wikidata.org/entity/Q123677008</a>. Claims or attributions were made on Bionomia, <a href="http://bionomia.net">https://bionomia.net</a> using specimen data from the Global Biodiversity Information Facility, <a href="https://gbif.org">https://gbif.org</a>.
Natural history specimens collected and/or identified and deposited.
Natural history specimen data collected and/or identified by William Henry Harvey, <a href="http://www.wikidata.org/entity/Q1378128">http://www.wikidata.org/entity/Q1378128</a>. Claims or attributions were made on Bionomia, <a href="http://bionomia.net">https://bionomia.net</a> using specimen data from the Global Biodiversity Information Facility, <a href="https://gbif.org">https://gbif.org</a>.
Natural history specimens collected and/or identified and deposited.
Natural history specimen data collected and/or identified by José Arechavaleta, <a href="http://www.wikidata.org/entity/Q724785">http://www.wikidata.org/entity/Q724785</a>. Claims or attributions were made on Bionomia, <a href="http://bionomia.net">https://bionomia.net</a> using specimen data from the Global Biodiversity Information Facility, <a href="https://gbif.org">https://gbif.org</a>.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.