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1,751 results for “molecular phylogenetics”
FIGURE 6 in A cybertaxonomic revision of the new dung beetle tribe Parachoriini (Coleoptera: Scarabaeidae: Scarabaeinae) and its phylogenetic assessment using molecular and morphological data
FIGURE 6. Morphology of Parachorius asymmetricus. (A) aedeagus, left lateral view (holotype). (B) aedeagus, left lateral view (paratype). (C) aedeagus, right lateral view (holotype). (D) aedeagus, dorsal view (holotype). (E) habitus (male, holotype). (F) right metafemur (male, holotype). (G) protibia (putative female). (H) protibia (male, holotype).
FIGURE 4 in A cybertaxonomic revision of the new dung beetle tribe Parachoriini (Coleoptera: Scarabaeidae: Scarabaeinae) and its phylogenetic assessment using molecular and morphological data
FIGURE 4. Morphological elements of Parachorius. (A–C) Endophallic sclerites; aedeagus icon in blue circle indicates position of aedeagus in relation to endophallic sclerite. (D–G) Head in dorsal view. (A, D) Parachorius longipenis. (B) Parachorius fungorum. (C, G) Parachorius pseudojavanus. (E) Parachorius gotoi. (F) Parachorius globosus.
FIGURE 3 in A cybertaxonomic revision of the new dung beetle tribe Parachoriini (Coleoptera: Scarabaeidae: Scarabaeinae) and its phylogenetic assessment using molecular and morphological data
FIGURE 3. Morphology of Panelus sumatranus. (A–B) aedeagus in lateral view. (C) Parameres in dorsal view. (D) Habitus.
FIGURE 8 in A cybertaxonomic revision of the new dung beetle tribe Parachoriini (Coleoptera: Scarabaeidae: Scarabaeinae) and its phylogenetic assessment using molecular and morphological data
FIGURE 8. Morphology of Parachorius fukiensis. (A) aedeagus, lateral view (holotype). (B) aedeagus, lateral view (paratype, Laos, Phonsavan). (C) aedeagus, lateral view (paratype, Vietnam, Donghoi). (D) left metafemur (male, paratype, Laos, Phonsavan). (E) left metafemur (male, paratype, Vietnam, Donghoi). (F) habitus (male, holotype). (G) aedeagus.
FIGURE 2 in A cybertaxonomic revision of the new dung beetle tribe Parachoriini (Coleoptera: Scarabaeidae: Scarabaeinae) and its phylogenetic assessment using molecular and morphological data
FIGURE 2. Phylogenetic position of the tribe Parachoriini new tribe (highlighted in orange) in global molecular phylogeny of Scarabaeinae. (A) Maximum likelihood tree of 446 Scarabaeinae terminals (rogue taxa excluded). The terminals are stylized based on taxonomy, with the size of the cone corresponding to the number of analyzed terminals. The clades corresponding to scarabaeine tribes are highlighted in blue. Values above branches indicate bootstrap support that is shown only if value> 50%. Clade "P" is shown in purple. (B) Clade P magnified.
FIGURE 7 in A cybertaxonomic revision of the new dung beetle tribe Parachoriini (Coleoptera: Scarabaeidae: Scarabaeinae) and its phylogenetic assessment using molecular and morphological data
FIGURE 7. Morphology of Parachorius bolavensis. (A) aedeagus, lateral view (holotype). (B) aedeagus, lateral view (paratype). (C) aedeagus. (D) habitus (male, holotype). (E) protibia (male, paratype). (F) protibia (female, paratype). (G) left metafemur (male, paratype).
FIGURE 1 in A cybertaxonomic revision of the new dung beetle tribe Parachoriini (Coleoptera: Scarabaeidae: Scarabaeinae) and its phylogenetic assessment using molecular and morphological data
FIGURE 1. Diagnostic characters and phylogenetic position of the tribe Parachoriini new tribe (highlighted in orange) in morphological phylogeny of Scarabaeinae. (A) The strict consensus tree with Bremer support values comprising all analyzed taxa from equal weight analysis. (B) The strict consensus tree inferred using reduced taxon sample under implied weights option (k = 70 and 100). The species previously placed in Cassolus and Parachorius are highlighted in purple and blue respectively. (C–E) Diagnostic characters of the tribe Parachoriini. (C–D) Short and long ridges of metasternum respectively. (E) Phallobase with basal tubercles.
FIGURE 23 in A cybertaxonomic revision of the new dung beetle tribe Parachoriini (Coleoptera: Scarabaeidae: Scarabaeinae) and its phylogenetic assessment using molecular and morphological data
FIGURE 23. Morphology of Parachorius solodovnikovi. (A) aedeagus, lateral view (holotype). (B) aedeagus, lateral view (paratype, Thailand). (C) aedeagus, lateral view (paratype, Vietnam). (D) aedeagus, lateral view (E) habitus (male, holotype). (F) left metafemur (male, paratype, Vietnam) (G) left metafemur (male, holotype). (H) left protibia (male, holotype, original image flipped).
FIGURE 27 in A cybertaxonomic revision of the new dung beetle tribe Parachoriini (Coleoptera: Scarabaeidae: Scarabaeinae) and its phylogenetic assessment using molecular and morphological data
FIGURE 27. Distribution maps of Parachorius species. (A) Parachorius peninsularis. (B) Parachorius pseudojavanus. (C) Parachorius schuelkei. (D) Parachorius semsanganus. (E) Parachorius solodovnikovi. (F) Parachorius thomsoni. Type locality—type locality of species (holotype or lectotype); Type. Collection data—localities of type specimens associated with species (paratypes or paralectotypes); Collection data—localities of other specimens examined in this study. Literature data— localities retrieved from literature.
FIGURE 12 in A cybertaxonomic revision of the new dung beetle tribe Parachoriini (Coleoptera: Scarabaeidae: Scarabaeinae) and its phylogenetic assessment using molecular and morphological data
FIGURE 12. Morphology of Parachorius hookeri. (A) aedeagus, lateral view (holotype). (B) aedeagus lateral view. (C) left metafemur (male, holotype). (D) habitus (male, holotype)
FIGURE 26 in A cybertaxonomic revision of the new dung beetle tribe Parachoriini (Coleoptera: Scarabaeidae: Scarabaeinae) and its phylogenetic assessment using molecular and morphological data
FIGURE 26. Distribution maps of Parachorius species. (A) Parachorius hookeri. (B) Parachorius humeralis. (C) Parachorius javanus. (D) Parachorius longipenis. (E) Parachorius maruyamai. (F) Parachorius newthayerae. Type locality— type locality of species (holotype or lectotype); Type. Collection data—localities of type specimens associated with species (paratypes or paralectotypes); Collection data—localities of other specimens examined in this study.
FIGURE 22 in A cybertaxonomic revision of the new dung beetle tribe Parachoriini (Coleoptera: Scarabaeidae: Scarabaeinae) and its phylogenetic assessment using molecular and morphological data
FIGURE 22. Morphology of Parachorius semsanganus. (A) aedeagus, lateral view (paratype). (B) aedeagus, dorsal view (paratype). (C) aedeagus, apical view (paratype). (D) aedeagus lateral view. (E) right metafemur (male, paratype). (F) habitus (male, holotype).
FIGURE 25 in A cybertaxonomic revision of the new dung beetle tribe Parachoriini (Coleoptera: Scarabaeidae: Scarabaeinae) and its phylogenetic assessment using molecular and morphological data
FIGURE 25. Distribution maps of Parachorius species. (A) Parachorius asymmetricus. (B) Parachorius bolavensis. (C) Parachorius fukiensis. (D) Parachorius fungorum. (E) Parachorius globosus. (F) Parachorius gotoi. Type locality—type locality of species (holotype or lectotype); Type. Collection data—localities of type specimens associated with species (paratypes or paralectotypes); Collection data—localities of other specimens examined in this study.
Fig. 4 in Expanded morphological definition and molecular phylogenetic position of the Tam Dao mountain stream keelback Opisthotropis tamdaoensis (Squamata: Natricidae) from Vietnam
Fig. 4. Lateral views of two of the newly collected Opisthotropis lateralis in life. (A) Male ZFMK 100805. (B) Juvenile ZFMK 100806; the characteristic black lateral stripe that sharply separates the dark dorsal colouration from the light venter is well discernible. Photos: T. Ziegler
Fig. 2 in Expanded morphological definition and molecular phylogenetic position of the Tam Dao mountain stream keelback Opisthotropis tamdaoensis (Squamata: Natricidae) from Vietnam
Fig. 2. Characteristic feature of Opisthotropis tamdaoensis: the black lateral stripe in the midst of the dark dorsal colouration. (A) Male ZFMK 100000 (left), and female IEBR A.1016.32 (right) in preserved state. (B) Detail of the body side of the female IEBR A.1016.33 in preserved state. Photos: T. Ziegler
Fig. 5 in Expanded morphological definition and molecular phylogenetic position of the Tam Dao mountain stream keelback Opisthotropis tamdaoensis (Squamata: Natricidae) from Vietnam
Fig. 5. Combined Bayesian phylogram based on a partial cytochrome b fragment. Numbers above and under branches are MP/combined ML/partitioned ML bootstrap values and combined/partitioned Bayesian posterior probabilities (>50%), respectively. Hyphen and asterisk denote <50% and 100% values, respectively.
FIGURE 3. Phylogenetic reconstruction for 30 in Revision of the Genus Leptogomphus Selys in Borneo, including gene trees and a two marker molecular phylogeny (Odonata: Anisoptera: Gomphidae)
FIGURE 3. Phylogenetic reconstruction for 30 specimens of Leptogomphus and three outgroup taxa using the combined COI+ITS dataset. The best Maximum Likelihood tree is shown, with posterior probabilities from the Bayesian Inference analysis also depicted on the branches. Bootstrap values and posterior probabilities are shown if less than 100 or 1.0 respectively. RMNH collection codes are shown for each specimen, as well as the sex of the specimen and an indication of where it was collected.
FIGURE 1 in Observations on MaleNChus geraerti n. sp. (Rhabditida: Tylenchidae), a morphological and molecular phylogenetic study
FIGURE 1. Line drawings of Malenchus geraerti n. sp. A&B: Female and male entire body, C: Female reproductive system, D&E: Details of anterior end (E: Showing the lateral field origin), F: Cuticle surface, G: Male posterior body region, H: Pharynx of female.
FIGURE 5. Bayesian 50 in Observations on MaleNChus geraerti n. sp. (Rhabditida: Tylenchidae), a morphological and molecular phylogenetic study
FIGURE 5. Bayesian 50% majority rule consensus tree including Malenchus geraerti n. sp. inferred from LSU rDNA D2/D3 under the GTR+G+I model. Bayesian posterior probabilities and maximum likelihood bootstrap values more than 50% are given for appropriate clades in the shape BPP/ML BS. The new species is in bold.
FIGURE 4. Bayesian 50 in Observations on MaleNChus geraerti n. sp. (Rhabditida: Tylenchidae), a morphological and molecular phylogenetic study
FIGURE 4. Bayesian 50% majority rule consensus tree including Malenchus geraerti n. sp. inferred from SSU rDNA under the GTR+G+I model. Bayesian posterior probabilities and maximum likelihood bootstrap values more than 50% are given for appropriate clades in the shape BPP/ML BS. The new species is in bold.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.