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Supplementary material 1 from: Bernardo-Madrid R, González-Moreno P, Gallardo B, Bacher S, Vilà M (2022) Consistency in impact assessments of invasive species is generally high and depends on protocols and impact types. In: Giannetto D, Piria M, Tarkan AS, Zięba G (Eds) Recent advancements in the risk screening of freshwater and terrestrial non-native species. NeoBiota 76: 163-190. https://doi.org/10.3897/neobiota.76.83028
Tables S1–S13
Supplementary material 2 from: Vilizzi L, Piria M, Pietraszewski D, Kopecký O, Špelić I, Radočaj T, Šprem N, Ta KAT, Tarkan AS, Weiperth A, Yoğurtçuoğlu B, Candan O, Herczeg G, Killi N, Lemić D, Szajbert B, Almeida D, Al-Wazzan Z, Atique U, Bakiu R, Chaichana R, Dashinov D, Ferincz Á, Flieller G, Gilles Jr AS, Goulletquer P, Interesova E, Iqbal S, Koyama A, Kristan P, Li S, Lukas J, Moghaddas SD, Monteiro JG, Mumladze L, Olsson KH, Paganelli D, Perdikaris C, Pickholtz R, Preda C, Ristovska M, Švolíková KS, Števove B, Uzunova E, Vardakas L, Verreycken H, Wei H, Zięba G (2022) Development and application of a multilingual electronic decision-support tool for risk screening non-native terrestrial animals under current and future climate conditions. In: Giannetto D, Piria M, Tarkan AS, Zięba G (Eds) Recent advancements in the risk screening of freshwater and terrestrial non-native species. NeoBiota 76: 211-236. https://doi.org/10.3897/neobiota.76.84268
Combined TAS-ISK report
Supplementary material 1 from: Vilizzi L, Piria M, Pietraszewski D, Kopecký O, Špelić I, Radočaj T, Šprem N, Ta KAT, Tarkan AS, Weiperth A, Yoğurtçuoğlu B, Candan O, Herczeg G, Killi N, Lemić D, Szajbert B, Almeida D, Al-Wazzan Z, Atique U, Bakiu R, Chaichana R, Dashinov D, Ferincz Á, Flieller G, Gilles Jr AS, Goulletquer P, Interesova E, Iqbal S, Koyama A, Kristan P, Li S, Lukas J, Moghaddas SD, Monteiro JG, Mumladze L, Olsson KH, Paganelli D, Perdikaris C, Pickholtz R, Preda C, Ristovska M, Švolíková KS, Števove B, Uzunova E, Vardakas L, Verreycken H, Wei H, Zięba G (2022) Development and application of a multilingual electronic decision-support tool for risk screening non-native terrestrial animals under current and future climate conditions. In: Giannetto D, Piria M, Tarkan AS, Zięba G (Eds) Recent advancements in the risk screening of freshwater and terrestrial non-native species. NeoBiota 76: 211-236. https://doi.org/10.3897/neobiota.76.84268
Table S1
Text-fig. 5. Anacardiaceae (a–m), Burseraceae (n–q). Scale bars = 1 cm. a–f: Pentoperculum sp. a–c: USNM PAL 772360. a: Lateral view of endocarp, apex up; three germination valves visible, the central clearly displaying the bipartite nature of the valve, reflected light, palladium coated. b: Apical view displaying six locules, with two preserved germination valves at the lower left, reflected light, palladium coated. c: Basal view of the endocarp, the locules suggested by swellings; note point of attachment, micro-CT scan surface rendering. d–f: Pentoperculum sp. USNM PAL 772359, reflected light, palladium coated. d: Lateral view of a probable 6-loculed endocarp, apex up; a single intact germination valve in the center, displaying the central lineation that divides it in two. e: Apical view; two bi-partite germination valves are visible, indicated by arrows to the middle cleavage line of two of the valves. f: Basal view, the locules suggested by the undulations in the margin. g–i: Indet. Spondioideae. USNM PAL 772358, reflected light, palladium coated. g: Lateral view of multi-locular endocarp, apex up. h: Apical view showing finely punctuate surface and peripheral locule cavities. i: Basal view. j–m: Cf. Pleiogynium USNM PAL 772357. j: Lateral view of the multi-locular endocarp, apex up; note intact germination valve on left and exposed locule facing the viewer, micro-CT scan surface rendering. k: Lateral view, rotated about 30° from (j), showing three exposed locules, reflected light, palladium coated; note bipartite locule lining at center. l: Apical view of the multilocular endocarp; the locule with intact germination valve at the upper right, reflected light, palladium coated. Arrows to each locule. m: Basal view showing central point of attachment and prominent radiating ridges aligned with the locules, micro-CT scan surface rendering. n–q: Canarium, USNM PAL 772361. Scale bar = 1 cm. n: Lateral view of endocarp directly facing one germination valve flanked by two strong ridges; apex up; specimen coated in sodium nitrate and photographed by R. A. Scott. o: Lateral view facing one of the three pronounced ridges, flanked to the left and right by two germination valves; apex up. p: Apical view displaying the three strong ridges, arching over the apex and flanking three deep embayments, covered with germination valves. q: Basal view, the three ridges being less pronounced. o–q: Reflected light, palladium coated. in The Early Middle Eocene Wagon Bed Carpoflora Of Central Wyoming, U.S.A.
Text-fig. 5. Anacardiaceae (a–m), Burseraceae (n–q). Scale bars = 1 cm. a–f: Pentoperculum sp. a–c: USNM PAL 772360. a: Lateral view of endocarp, apex up; three germination valves visible, the central clearly displaying the bipartite nature of the valve, reflected light, palladium coated. b: Apical view displaying six locules, with two preserved germination valves at the lower left, reflected light, palladium coated. c: Basal view of the endocarp, the locules suggested by swellings; note point of attachment, micro-CT scan surface rendering. d–f: Pentoperculum sp. USNM PAL 772359, reflected light, palladium coated. d: Lateral view of a probable 6-loculed endocarp, apex up; a single intact germination valve in the center, displaying the central lineation that divides it in two. e: Apical view; two bi-partite germination valves are visible, indicated by arrows to the middle cleavage line of two of the valves. f: Basal view, the locules suggested by the undulations in the margin. g–i: Indet. Spondioideae. USNM PAL 772358, reflected light, palladium coated. g: Lateral view of multi-locular endocarp, apex up. h: Apical view showing finely punctuate surface and peripheral locule cavities. i: Basal view. j–m: Cf. Pleiogynium USNM PAL 772357. j: Lateral view of the multi-locular endocarp, apex up; note intact germination valve on left and exposed locule facing the viewer, micro-CT scan surface rendering. k: Lateral view, rotated about 30° from (j), showing three exposed locules, reflected light, palladium coated; note bipartite locule lining at center. l: Apical view of the multilocular endocarp; the locule with intact germination valve at the upper right, reflected light, palladium coated. Arrows to each locule. m: Basal view showing central point of attachment and prominent radiating ridges aligned with the locules, micro-CT scan surface rendering. n–q: Canarium, USNM PAL 772361. Scale bar = 1 cm. n: Lateral view of endocarp directly facing one germination valve flanked by two strong ridges; apex up; specimen coated in sodium nitrate and photographed by R. A. Scott. o: Lateral view facing one of the three pronounced ridges, flanked to the left and right by two germination valves; apex up. p: Apical view displaying the three strong ridges, arching over the apex and flanking three deep embayments, covered with germination valves. q: Basal view, the three ridges being less pronounced. o–q: Reflected light, palladium coated.
Figures 5-8 from: Courtney Mustaphi CJ, Githumbi EN, Shotter LR, Rucina SM, Marchant R (2016) Subfossil statoblasts of Lophopodella capensis (Sollas, 1908) (Bryozoa, Phylactolaemata, Lophopodidae) in the Upper Pleistocene and Holocene sediments of a montane wetland, Eastern Mau Forest, Kenya. African Invertebrates 57(1): 39-52. https://doi.org/10.3897/afrinvertebr.57.8191
Figures 5-8 - Lophopodella capensis statoblasts and organic detritus, including charcoal at right, from the sieved sediment subsample from25–26 cm stratigraphic depth, dated to 220–230 yr BP (5). A well preserved statoblast observed at 41–42 cm, dated to 670–711 (6). Pleistocene-aged statoblast from 480–481 cm, dated to 15600–15700 (7). Same specimen as Fig. 6 showing the split layers of the polar spine and recurved hooks (8).
Figure 1 from: Courtney Mustaphi CJ, Githumbi EN, Shotter LR, Rucina SM, Marchant R (2016) Subfossil statoblasts of Lophopodella capensis (Sollas, 1908) (Bryozoa, Phylactolaemata, Lophopodidae) in the Upper Pleistocene and Holocene sediments of a montane wetland, Eastern Mau Forest, Kenya. African Invertebrates 57(1): 39-52. https://doi.org/10.3897/afrinvertebr.57.8191
Figure 1 - Location of the study site in Africa (A) and within Kenya (B). The location of the coring site (black circle) within Enapuiyapui (C). The red line represents a fire break cutline.
Figure 4 from: Courtney Mustaphi CJ, Githumbi EN, Shotter LR, Rucina SM, Marchant R (2016) Subfossil statoblasts of Lophopodella capensis (Sollas, 1908) (Bryozoa, Phylactolaemata, Lophopodidae) in the Upper Pleistocene and Holocene sediments of a montane wetland, Eastern Mau Forest, Kenya. African Invertebrates 57(1): 39-52. https://doi.org/10.3897/afrinvertebr.57.8191
Figure 4 - BACON version 2.2 R program language script age-depth model for the Enapuiyapui stratigraphy using MCMC random walks (greyscale shading) through the probable radiocarbon dates (1σ age probability distributions represented in blue) that were calibrated using the IntCal13 curve (Table 1; Blaauw and Christenson 2011; Reimer et al. 2013; R Development Core Team 2015). The final model used the weighted average of the random walk densities (red line) and 95% CI (dotted grey lines) and parameter settings are shown at the top right (red font). Ages reported as calibrated year BP (before present, 1950 CE). ITRAX optical core face photographs and magnetic susceptibility profile (grey line) at bottom left that shows the 484–0 cm section of the 537 cm core. Zones were defined using a regime shift index of the magnetic susceptibility values (Rodionov 2004). Lophopodella capensis presence data are represented by red '+' symbols on the magnetic susceptibility profile. Abbreviations are AHP: African Humid Period, H: Holocene, Ps: Pleistocene.
Figure 2 from: Fariselli R, Speranza M, Aleffi M (2017) Bryological flora of the regional historic Park of Monte Sole (Emilia-Romagna, Italy). Italian Botanist 3: 99-108. https://doi.org/10.3897/ib.3.12663
Figure 2 - Cartographic grid of the Emilia-Romagna administrative region and, in detail, of the Park of Monte Sole.
Figures 2-3 from: Courtney Mustaphi CJ, Githumbi EN, Shotter LR, Rucina SM, Marchant R (2016) Subfossil statoblasts of Lophopodella capensis (Sollas, 1908) (Bryozoa, Phylactolaemata, Lophopodidae) in the Upper Pleistocene and Holocene sediments of a montane wetland, Eastern Mau Forest, Kenya. African Invertebrates 57(1): 39-52. https://doi.org/10.3897/afrinvertebr.57.8191
Figures 2-3 - An wide angle aerial oblique photograph of Enapuiyapui wetland from the northwest facing southeast (2). Coring the center of the Cyperaceae-Poaceae wetland, April 2014 (3).
Figure 9 from: Fenu G, Bacchetta G, Bernardo L, Calvia G, Citterio S, Foggi B, Fois M, Gangale C, Galasso G, Gargano D, Gennai M, Gentili R, Larroux G, Perrino EV, Peruzzi L, Roma-Marzio F, Uzunov D, Vagge I, Viciani D, Wagensommer RP, Orsenigo S (2016) Global and Regional IUCN Red List Assessments: 2. Italian Botanist 2: 93-115. https://doi.org/10.3897/italianbotanist.2.10975
Figure 9 - Onosma helvetica subsp. lucana near the village of Farneta (Castroregio, Cosenza, Calabria), a locality included in the Pollino National Park. Photograph by F. Roma-Marzio.
Figure 12 from: Fenu G, Bacchetta G, Bernardo L, Calvia G, Citterio S, Foggi B, Fois M, Gangale C, Galasso G, Gargano D, Gennai M, Gentili R, Larroux G, Perrino EV, Peruzzi L, Roma-Marzio F, Uzunov D, Vagge I, Viciani D, Wagensommer RP, Orsenigo S (2016) Global and Regional IUCN Red List Assessments: 2. Italian Botanist 2: 93-115. https://doi.org/10.3897/italianbotanist.2.10975
Figure 12 - Geographic range and distribution map of Lathyrus laxiflorus subsp. laxiflorus in Italy.
Figure 11 from: Fenu G, Bacchetta G, Bernardo L, Calvia G, Citterio S, Foggi B, Fois M, Gangale C, Galasso G, Gargano D, Gennai M, Gentili R, Larroux G, Perrino EV, Peruzzi L, Roma-Marzio F, Uzunov D, Vagge I, Viciani D, Wagensommer RP, Orsenigo S (2016) Global and Regional IUCN Red List Assessments: 2. Italian Botanist 2: 93-115. https://doi.org/10.3897/italianbotanist.2.10975
Figure 11 - Lathyrus laxiflorus subsp. laxiflorus in Vallone Cecita (1,150 m a.s.l., Longobucco, Cosenza, Italy). Photograph by C. Gangale.
Figure 7 from: Fenu G, Bacchetta G, Bernardo L, Calvia G, Citterio S, Foggi B, Fois M, Gangale C, Galasso G, Gargano D, Gennai M, Gentili R, Larroux G, Perrino EV, Peruzzi L, Roma-Marzio F, Uzunov D, Vagge I, Viciani D, Wagensommer RP, Orsenigo S (2016) Global and Regional IUCN Red List Assessments: 2. Italian Botanist 2: 93-115. https://doi.org/10.3897/italianbotanist.2.10975
Figure 7 - Limonium multiforme Pignatti in Calafuria cliffs, near Livorno (Tuscany). Photograph by D. Viciani.
Figure 5 from: Fenu G, Bacchetta G, Bernardo L, Calvia G, Citterio S, Foggi B, Fois M, Gangale C, Galasso G, Gargano D, Gennai M, Gentili R, Larroux G, Perrino EV, Peruzzi L, Roma-Marzio F, Uzunov D, Vagge I, Viciani D, Wagensommer RP, Orsenigo S (2016) Global and Regional IUCN Red List Assessments: 2. Italian Botanist 2: 93-115. https://doi.org/10.3897/italianbotanist.2.10975
Figure 5 - Hieracium australe subsp. australe photographed in Sforza Castle (Milano). Photograph by G. Bardelli.
Figure 1 from: Fenu G, Bacchetta G, Bernardo L, Calvia G, Citterio S, Foggi B, Fois M, Gangale C, Galasso G, Gargano D, Gennai M, Gentili R, Larroux G, Perrino EV, Peruzzi L, Roma-Marzio F, Uzunov D, Vagge I, Viciani D, Wagensommer RP, Orsenigo S (2016) Global and Regional IUCN Red List Assessments: 2. Italian Botanist 2: 93-115. https://doi.org/10.3897/italianbotanist.2.10975
Figure 1 - Phenological features of Charybdis glaucophylla Bacch., Brullo, D'Emerico, Pontec. & Salmeri; of winter foliation (a), summer flowering (b) and natural late-summer habit (c) in Sardinia. Photograph by G. Bacchetta.
Figure 3 from: Fenu G, Bacchetta G, Bernardo L, Calvia G, Citterio S, Foggi B, Fois M, Gangale C, Galasso G, Gargano D, Gennai M, Gentili R, Larroux G, Perrino EV, Peruzzi L, Roma-Marzio F, Uzunov D, Vagge I, Viciani D, Wagensommer RP, Orsenigo S (2016) Global and Regional IUCN Red List Assessments: 2. Italian Botanist 2: 93-115. https://doi.org/10.3897/italianbotanist.2.10975
Figure 3 - Euphorbia nicaeensis subsp. japygica photographed in National Park of Alta Murgia (Altamura). Photograph by E.V. Perrino.
Supplementary material 1 from: Vyshedskiy A, Mahapatra S, Dunn R (2017) Linguistically deprived children: meta-analysis of published research underlines the importance of early syntactic language use for normal brain development. Research Ideas and Outcomes 3: e20696. https://doi.org/10.3897/rio.3.e20696
Linguistic isolates performance in verbal and nonverbal tests
Supplementary material 1 from: Cardoso A, Tsiamis K, Gervasini E, Schade S, Taucer F, Adriaens T, Copas K, Flevaris S, Galiay P, Jennings E, Josefsson M, López B, Magan J, Marchante E, Montani E, Roy H, von Schomberg R, See L, Quintas M (2017) Citizen Science and Open Data: a model for Invasive Alien Species in Europe. Research Ideas and Outcomes 3: e14811. https://doi.org/10.3897/rio.3.e14811
Appendix 2.
Supplementary material 2 from: Mounce R, Murray-Rust P, Wills M (2017) A machine-compiled microbial supertree from figure-mining thousands of papers. Research Ideas and Outcomes 3: e13589. https://doi.org/10.3897/rio.3.e13589
The machine-readable text from the screenshot.
Supplementary material 1 from: Mounce R, Murray-Rust P, Wills M (2017) A machine-compiled microbial supertree from figure-mining thousands of papers. Research Ideas and Outcomes 3: e13589. https://doi.org/10.3897/rio.3.e13589
A one-per-line UT8-encoded plain-text list of URLs of the 5816 source PDFs used in this research
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.