Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
1,411
datasets available to search
ShareScore release 0.9.0
Dataset results
1,411 results for “Cell States”
Augmentation of a neuroprotective myeloid state by hematopoietic cell transplantation
GEO Series GSE217529. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Enhancer grammar of liver cell types and hepatocyte zonation states [scRNA-seq]
GEO Series GSE218465. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Interfollicular epidermal differentiation is gradualistic rather than stepwise with GRHL3 controlling progression from stem to transition cell states
GEO Series GSE154579. Mus musculus. 13 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-sequencing of peripheral neuroblastic tumors reveals an aggressive transitional cell state at the junction of an adrenergic-mesenchymal transdifferentiation trajectory
GEO Series GSE192906. Homo sapiens. 10 samples. Type: Expression profiling by high throughput sequencing.
A genome-wide screen reveals new regulators of the 2-cell-like cell state
GEO Series GSE221710. Mus musculus. 48 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
RNA-sequecing of disctinct cell states along the E-M phenotypic specturm
GEO Series GSE158113. Homo sapiens. 16 samples. Type: Expression profiling by high throughput sequencing.
Systematic mapping of cell state trajectories, cell lineage, and perturbations in the zebrafish embryo using single cell transcriptomics
GEO Series GSE112294. Danio rerio. 18 samples. Type: Expression profiling by high throughput sequencing.
Deciphering cell states and genealogies of human hematopoiesis with single-cell multi-omics [Extended donors]
GEO Series GSE261078. Homo sapiens. 9 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Single-Cell Exon Deletion Profiling Reveals Splicing Events That Shape Gene Expression and Cell State Dynamics [scRNA-seq]
GEO Series GSE293013. Homo sapiens. 24 samples. Type: Expression profiling by high throughput sequencing.
Tracking the embryonic stem cell transition from ground state pluripotency
GEO Series GSE92273. Mus musculus. 12 samples. Type: Methylation profiling by high throughput sequencing.
Genome-wide maps of chromatin state in human primary CAR-T cells
GEO Series GSE174282. Homo sapiens. 92 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Aberrant cell state plasticity mediated by developmental reprogramming precedes colorectal cancer initiation
GEO Series GSE221300. Homo sapiens; Mus musculus. 19 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Transcription profiling of major depression peripheral blood mononuclear cells (PBMCs) at clinical remission compared to severe acute state
GEO Series GSE38206. Homo sapiens. 36 samples. Type: Expression profiling by array.
A neutropenia-associated transcription factor mutation differentially impacts target genes in the cell-states traversed during granulocyte specification and commitment [Gfi1-R412X-Irf8]
GEO Series GSE120407. Mus musculus. 91 samples. Type: Expression profiling by high throughput sequencing.
ChIP-seq analysis of chromatin state plasticity in primary human adult erythroid progenitor cells
GEO Series GSE52924. Homo sapiens. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Amino acid intake strategies define pluripotent cell states
GEO Series GSE216356. Mus musculus. 16 samples. Type: Expression profiling by high throughput sequencing.
Derivation of novel human ground state naïve pluripotent stem cells.
GEO Series GSE52824. Homo sapiens; Mus musculus. 71 samples. Type: Expression profiling by array; Genome binding/occupancy profiling by high throughput sequencing; Methylation profiling by high throughput sequencing.
Conserved patterns of transcriptional dysregulation, heterogeneity and cell states in clear cell kidney cancer [Bulk RNA-seq]
GEO Series GSE269819. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [tfap2a/e]
GEO Series GSE151676. Danio rerio. 6 samples. Type: Expression profiling by high throughput sequencing.
Epigenomic comparison of distinct pluripotent stem cell states reveals a new class of enhancers with roles throughout mammalian development (ChIP-seq)
GEO Series GSE57407. Mus musculus. 5 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.