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1,257
datasets available to search
ShareScore release 0.9.0
Dataset results
1,257 results for “METHYLATION PROFILE”
Early arthritis CD4+ T cell DNA methylation profiling
GEO Series GSE137593. Homo sapiens. 103 samples. Type: Methylation profiling by genome tiling array.
Genome-scale methylome profiling of human pheochromocytomas and paragangliomas (Illumina methylation beadchips) and mouse chromaffin cells (RRBS)
GEO Series GSE43298. Mus musculus; Homo sapiens. 176 samples. Type: Methylation profiling by array; Methylation profiling by high throughput sequencing.
Transcriptome and DNA methylation profiling during the NSN to SN transition in mouse oocytes
GEO Series GSE274327. Mus musculus. 26 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide DNA methylation profiling reveals a novel hypermethylated biomarker PRKCB in gastric cancer
GEO Series GSE272207. Homo sapiens. 8 samples. Type: Methylation profiling by high throughput sequencing.
DNA methylation profiling to determine the primary sites of metastatic cancers using formalin-fixed paraffin-embedded tissues [wgbs_set]
GEO Series GSE233088. Homo sapiens. 10 samples. Type: Methylation profiling by high throughput sequencing.
Mouse DNA methylation atlas using Infinium Mouse Methylation Beadchips [EPIC array profiling]
GEO Series GSE310817. Mus musculus; Homo sapiens. 37 samples. Type: Methylation profiling by genome tiling array.
DNA methylation profiling of proliferating and differentiating keratinocytes
GEO Series GSE144669. Homo sapiens. 10 samples. Type: Methylation profiling by genome tiling array.
Unraveling the whole genome DNA methylation profile of zebrafish kidney marrow through Oxford Nanopore sequencing
GEO Series GSE232842. Danio rerio. 12 samples. Type: Methylation profiling by high throughput sequencing.
Genome-wide methylation profiling identifies hypermethylated biomarkers in high-grade cervical intraepithelial neoplasia
GEO Series GSE36319. Homo sapiens. 25 samples. Type: Methylation profiling by genome tiling array.
Genome-wide DNA methylation profiles of Arsenic exposed subjects through drinking water in Pakistan
GEO Series GSE157111. Homo sapiens. 57 samples. Type: Methylation profiling by genome tiling array.
Genome-Wide DNA Methylation Profiling Identifies Differential Methylation in Uninvolved Psoriatic Epidermis
GEO Series GSE103038. Homo sapiens. 12 samples. Type: Methylation profiling by high throughput sequencing.
Differential DNA methylation profile in hepatocellular carcinoma
GEO Series GSE78904. Homo sapiens. 96 samples. Type: Methylation profiling by genome tiling array.
Single-cell m6A profiling in the mouse brain uncovers cell type-specific RNA methylomes and age-dependent differential methylation [aged study]
GEO Series GSE268159. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
NOMe-HiC: joint profiling of genetic variants, DNA methylation, chromatin accessibility, and 3D genome in the same DNA molecule
GEO Series GSE189158. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing; Other.
An evaluation of analysis pipelines for DNA methylation profiling using the Illumina Human Methylation 450k platform
GEO Series GSE43976. Homo sapiens. 95 samples. Type: Methylation profiling by genome tiling array.
Molecular profiles (somatic mutations, gene expression and DNA methylation) of multiple pattern-annotated lung adenocarcinoma tumor regions.
<p>Please refer to the methods section of the paper for more detailed explanations. In summary:</p> <ul> <li><strong>chuv_molecular_dataset_annotation.xlsx</strong>: table containing clinical information for each patient, molecular profiles available for each sample, histologic pattern annotation and driver mutations detected.</li> <li><strong>CHUV_MAF.txt</strong>: MAF file containing mutations found in each sample. Mutations were called using GATK4 pipeline and Mutect2. Filtered .vcf files were converted into maf files using vcf2maf. Annotations to patient, region and samples are reported in additional columns.</li> <li><strong>CHUV_DNAmethylation_BetaValues_ComBat.txt</strong>: DNA methylation beta values generated with minfi and batch-corrected with ComBat.</li> <li><strong>CHUV_GeneExpression_RsemExpectedCounts.txt</strong>: Gene-level expression counts computed with RSEM.</li> <li><strong>CHUV_GeneExpression_log2TPM_ComBat.txt</strong>: Gene-level expression normalized as log2(TPM+1) computed with RSEM and batch-corrected with ComBat.</li> </ul>
Comprehensive DNA Methylation Profiling in Crohn's Disease
ClinicalTrials.gov study NCT03272152. IPD Sharing: Not stated. Countries: 1. Publications: 0.
An Observational Study on the Assessment of Lung Cancer Using Liquid Biopsy for Collecting miRNA Expression Profile and DNA Methylation Biomarkers.
ClinicalTrials.gov study NCT07182214. IPD Sharing: UNDECIDED. Countries: 1. Publications: 0.
LINE-1 and Alu Methylation Levels Among Middle Aged Women With Low Cardiovascular Risk Profile in Respect of Menopausal Hot Flashes
ClinicalTrials.gov study NCT05892211. IPD Sharing: UNDECIDED. Countries: 1. Publications: 0.
Specific Methylation Profiles in HNSCC
ClinicalTrials.gov study NCT04567056. IPD Sharing: Not stated. Countries: 1. Publications: 0.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.