Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
522
datasets available to search
ShareScore release 0.9.0
Dataset results
522 results for “gene regulatory network”
Zonal Gene Expression and Gene Regulatory Network Responses in Centrilobular and Periportal Hepatocytes Following Repeated Exposure to TCDD (2,3,7,8-tetrachlorodibenzo-p-dioxin)
GEO Series GSE72506. Rattus norvegicus. 191 samples. Type: Expression profiling by array.
SEAMoD: A fully interpretable neural network for cis-regulatory analysis of differentially expressed genes
GEO Series GSE236450. Mus musculus. 24 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
UNVEILING THE MIXL1 CORE GENE REGULATORY NETWORK FOR CELL FATE DECISION DURING MOUSE GASTRULATION
GEO Series GSE161242. Mus musculus. 16 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Genome-wide analysis of microRNA-mRNA gene regulatory networks reveals widespread involvement of microRNAs in visually guided eye emmetropization and myopia
GEO Series GSE200054. Mus musculus. 40 samples. Type: Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing.
GRNsmile: gene regulatory network inference with a single-cell multi-layer omics approach
GEO Series GSE173460. Homo sapiens. 16 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Histone lactylation couples cellular metabolism with the activation of developmental gene regulatory networks [CUT&RUN control and SOX9/TEA1-VPR over-expressing]
GEO Series GSE241256. Gallus gallus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Histone lactylation couples cellular metabolism with the activation of developmental gene regulatory networks [NCC CUT&RUN]
GEO Series GSE228335. Gallus gallus. 10 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
The LHX1 Gene Regulatory Network Represses Pluripotency and Modulates Multiple Signaling Pathways to Specify the Embryonic Head [Embryo DamID-seq]
GEO Series GSE279965. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Modeling and characterization of the dynamic gene regulatory networks underlying cancer drug resistance based on time-course RNA-seq data
GEO Series GSE128722. Homo sapiens. 15 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide analysis of gene regulatory networks in chickens reveals dynamic temporal changes in retinal signaling cascade underlying compensation to lens-imposed optical defocus
GEO Series GSE203630. Gallus gallus. 84 samples. Type: Expression profiling by high throughput sequencing.
Histone lactylation couples cellular metabolism with the activation of developmental gene regulatory networks [SOX9 MO ATAC-seq]
GEO Series GSE228341. Gallus gallus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Aggregated gene co-expression networks for predicting transcription factor regulatory landscapes in a non-model plant species
GEO Series GSE230186. Vitis vinifera. 4 samples. Type: Other.
Histone lactylation couples cellular metabolism with the activation of developmental gene regulatory networks [R-GNE-140 ATAC-seq]
GEO Series GSE228342. Gallus gallus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Transcriptional profiling of two muscadine grape cultivars ‘Carlos’ and ‘Noble’ to reveal new genes, gene regulatory networks, and pathways that involved in grape berry ripening
GEO Series GSE203347. Vitis rotundifolia. 18 samples. Type: Expression profiling by high throughput sequencing.
A gene regulatory network of the endothelial-to-hematopoietic transition
GEO Series GSE233057. Mus musculus. 63 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Multi-organ Gene Expression Dynamics and Network Modeling Reveals Sex-specific Shifts in Regulatory Control during the Development of Hypertension
GEO Series GSE227753. Rattus norvegicus. 146 samples. Type: Expression profiling by RT-PCR.
GRNsmile: gene regulatory network inference with a single-cell multi-layer omics approach [Micro-C]
GEO Series GSE173459. Homo sapiens. 6 samples. Type: Other.
Influenza A virus infection sustainably rewires pneumocyte gene regulatory network responses to different pneumococcal serotypes in secondary Streptococcus pneumoniae infection [ATAC-seq]
GEO Series GSE225498. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
The LHX1 Gene Regulatory Network Represses Pluripotency and Modulates Multiple Signaling Pathways to Specify the Embryonic Head [Embryo_ATAC-seq]
GEO Series GSE280128. Mus musculus. 12 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Influenza A virus infection sustainably rewires pneumocyte gene regulatory network responses to different pneumococcal serotypes in secondary Streptococcus pneumoniae infection
GEO Series GSE225343. Mus musculus. 42 samples. Type: Expression profiling by array.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.