Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
2,182
datasets available to search
ShareScore release 0.9.0
Dataset results
2,182 results for “organoid”
ChIP-seq for TCF4 in human medial ganglionic eminence-like organoids (hMGEOs) derived from ihtc-03 cell line.
GEO Series GSE235071. Homo sapiens. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ATAC-sequencing of genetically engineered intestinal organoid lines modeling colorectal cancer (CRC) progression
GEO Series GSE239752. Mus musculus. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Multiomics analysis of a DNAH5-mutated PCD organoid model revealed the key role of the TGF-β/BMP and Notch pathways in epithelial differentiation and the immune response in DNAH5-mutated patients
GEO Series GSE217596. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Single cell RNA sequencing from organoid stroma derived from E16 salivary glands.
GEO Series GSE193041. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Transcriptomic data from cultured human fetal lung tip-derived organoids at different stages of lung development
GEO Series GSE178528. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Understanding the reproducibility and robustness of the kidney organoid differentiation protocol using RNA-seq
GEO Series GSE89044. Homo sapiens. 10 samples. Type: Expression profiling by high throughput sequencing.
Single cell gene expression analysis of stem cell-derived cerebral organoids treated with Methamphetamine
GEO Series GSE119861. Homo sapiens. 14 samples. Type: Expression profiling by high throughput sequencing.
A novel pancreatic ductal adenocarcinoma organoid recapitulating tumor microenvironment reveals macrophage-driven enhanced cancer cell survival
GEO Series GSE249673. Homo sapiens. 34 samples. Type: Expression profiling by high throughput sequencing.
Preservation of stemness in high-grade serous ovarian cancer organoids requires low Wnt environment
GEO Series GSE125883. Homo sapiens. 20 samples. Type: Expression profiling by array.
Patient and xenograft-derived organoids recapitulate pediatric brain tumors features and patient treatments
GEO Series GSE247381. Homo sapiens. 15 samples. Type: Methylation profiling by genome tiling array; Expression profiling by high throughput sequencing.
Pharmacological reversal of synaptic and network pathology in human MECP2-KO neurons and cortical organoids
GEO Series GSE160146. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
Whole genome bisulfite sequencing (WGBS) of intestinal organoids from mice with graft-versus-host disease
GEO Series GSE243364. Mus musculus. 6 samples. Type: Methylation profiling by high throughput sequencing.
Cellular crosstalk mediated by TGF-β drives epithelial-mesenchymal transition in patient-derived multilineage biliary organoids
GEO Series GSE266169. Homo sapiens. 14 samples. Type: Expression profiling by high throughput sequencing.
Single cell RNA sequencing (scRNAseq) of epithelial cells from untreated and IFNy-treated colon organoids
GEO Series GSE255366. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Gene expression changes after blockade of Frizzled7 in murine intestinal organoids
GEO Series GSE94159. Mus musculus. 24 samples. Type: Expression profiling by high throughput sequencing.
HNF1B induced three-dimensional genome analysis of patient-derived pancreas neoplasm organoids [ChIP-seq]
GEO Series GSE202020. Homo sapiens. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Single-cell RNA-Seq of human thyroid organoid II
GEO Series GSE203084. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.
RNA-Seq analysis of human skeletal muscle organoids
GEO Series GSE147513. Homo sapiens. 13 samples. Type: Expression profiling by high throughput sequencing.
Differentiating visceral sensory ganglion organoids from induced pluripotent stem cells
GEO Series GSE264303. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
Multi-ome profiling (paired RNAseq and ATACseq) of human iPSC-derived renal organoids over the period of MET
GEO Series GSE232787. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.