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Supplementary material 14 from: Paez-Triana L, Herrera G, Vega L, Garcia-Corredor D, Pulido Medellín MO, Paniz-Mondolfi A, Muñoz M, Ramírez JD (2023) Metagenomic exploration of endosymbionts and pathogens in the tropical lineage of Rhipicephalus sanguineus sensu lato (s.l.) ticks in Colombia. Metabarcoding and Metagenomics 7: e109085. https://doi.org/10.3897/mbmg.7.109085
Relative abundance by sample of resistence marker
Supplementary material 13 from: Paez-Triana L, Herrera G, Vega L, Garcia-Corredor D, Pulido Medellín MO, Paniz-Mondolfi A, Muñoz M, Ramírez JD (2023) Metagenomic exploration of endosymbionts and pathogens in the tropical lineage of Rhipicephalus sanguineus sensu lato (s.l.) ticks in Colombia. Metabarcoding and Metagenomics 7: e109085. https://doi.org/10.3897/mbmg.7.109085
Relative abundance by sample of virulence factors
Supplementary material 2 from: Paez-Triana L, Herrera G, Vega L, Garcia-Corredor D, Pulido Medellín MO, Paniz-Mondolfi A, Muñoz M, Ramírez JD (2023) Metagenomic exploration of endosymbionts and pathogens in the tropical lineage of Rhipicephalus sanguineus sensu lato (s.l.) ticks in Colombia. Metabarcoding and Metagenomics 7: e109085. https://doi.org/10.3897/mbmg.7.109085
Visual representation illustrating the methods utilized in the analysis discussed in the article
Supplementary material 11 from: Paez-Triana L, Herrera G, Vega L, Garcia-Corredor D, Pulido Medellín MO, Paniz-Mondolfi A, Muñoz M, Ramírez JD (2023) Metagenomic exploration of endosymbionts and pathogens in the tropical lineage of Rhipicephalus sanguineus sensu lato (s.l.) ticks in Colombia. Metabarcoding and Metagenomics 7: e109085. https://doi.org/10.3897/mbmg.7.109085
Abundance of taxonomy of endosymbionts and pathogens
Supplementary material 6 from: Paez-Triana L, Herrera G, Vega L, Garcia-Corredor D, Pulido Medellín MO, Paniz-Mondolfi A, Muñoz M, Ramírez JD (2023) Metagenomic exploration of endosymbionts and pathogens in the tropical lineage of Rhipicephalus sanguineus sensu lato (s.l.) ticks in Colombia. Metabarcoding and Metagenomics 7: e109085. https://doi.org/10.3897/mbmg.7.109085
Metadata and metagenomic information of collected samples
Supplementary material 9 from: Paez-Triana L, Herrera G, Vega L, Garcia-Corredor D, Pulido Medellín MO, Paniz-Mondolfi A, Muñoz M, Ramírez JD (2023) Metagenomic exploration of endosymbionts and pathogens in the tropical lineage of Rhipicephalus sanguineus sensu lato (s.l.) ticks in Colombia. Metabarcoding and Metagenomics 7: e109085. https://doi.org/10.3897/mbmg.7.109085
Abundance of taxonomy at the Family level within the domains of Bacteria and Archaea
Counts of winter ticks on live-captured moose in western US
<p>Data include counts of winter ticks (ticks.hind) along transects of variable length (transect.cm.hind) on the rumps of live-captured moose in 5 western US states (state). Other attribute data include the moose ID, capture date, local moose density (density.category), migratory status (migratory), presence of other ungulates on shared winter range (shared.winter.range). A suite of climate metrics are also included for each record specific to that capture location and year, labelled according to the biological season during which they were summarized (q=questing [fall]; d=dropoff [spring]; s=summer) as described in the manuscript. Metrics include the proprortionate snow cover (SnowProp), amount of snow water equivalent during midpoint and endpoint of season (SWEmid, SWEend), mean temperature (TempMean), number of days below 0 and -20 degrees C (TempDays0, TempDaysm20), average relative humidity daily minimum and maximum (RHmin, RHmax), cumulative precipitation (Precip), and landcover category (landcover). Lastly, also included are quadratic terms for some variables (_2) and 10-year averages of each metric spanning the study period, 2013-2022, (_avg). </p>
FIGURES 21–22 in A new species of tick (Acari: Ixodidae) from seabirds in New Zealand and Australia, previously misidentified as Ixodes eudyptidis
FIGURES 21–22. Ixodes laridis coxae and trochanters (I–IV): 21, female. 22, male.
Figure 3. A in Occurrence of ticks and tick-borne mixed parasitic microbiota in cross-bred cattle in District Lahore, Pakistan
Figure 3. A: PCR detection of T. annulata in cross-bred Cattle (Friesian x Sahiwal). L1 100bp ladder. L2 negative control, L3 PCR positive control. L4 & L5, positive samples. B: PCR detection of B. bigemina in cross-bred Cattle (Friesian x Sahiwal). L1 100bp ladder. L2 PCR positive control. L3, L4 & L5 positive samples. L8 negative control. C: PCR detection of A. marginale in cross-bred Cattle (Friesian x Sahiwal). L1 100bp ladder. L2 PCR negative control. L3 positive control. L5, L6, L7 & L8 positive samples.
Fig. 1. Gel electrophoresis stained with ethidium bromide showing 2 in First record of a spotted fever group Rickettsia sp. and Theileria annulata in Hyalomma dromedarii (Acari: Ixodidae) ticks in the United Arab Emirates
Fig. 1. Gel electrophoresis stained with ethidium bromide showing 2 DNA positive samples of Theileria annulata and spotted fever group (SFG) Rickettsia sp. amplified by PCR. Lane M: represents 100-bp DNA ladder (Promega, USA).
FIGURE 10 in The soft ticks (Parasitiformes: Ixodida: Argasidae) of Mexico: species, hosts, and geographical distribution
FIGURE 10. Distribution of Otobius species in Mexico.
FIGURE 7 in The soft ticks (Parasitiformes: Ixodida: Argasidae) of Mexico: species, hosts, and geographical distribution
FIGURE 7. Distribution of Argas species in Mexico.
FIGURE 6 in The soft ticks (Parasitiformes: Ixodida: Argasidae) of Mexico: species, hosts, and geographical distribution
FIGURE 6. Distribution of Antricola species in Mexico.
Fig. 3 in Cryptic species diversity in ticks that transmit disease in Australia
Fig. 3. TCS haplotype network based on 3 markers sequenced from ticks collected from Kioloa and Mogo State Forest in NSW, Australia. Samples are coloured based on their collection site, Mogo State Forest (blue) or, Kioloa (yellow). Voucher specimens are coloured red. (For interpretation of the references to colour in this figure legend, the reader is referred to the Web version of this article.)
Fig. 2 in Cryptic species diversity in ticks that transmit disease in Australia
Fig. 2. Maximum likelihood estimate based on three markers of ticks collected at Kioloa and Mogo State Forest, NSW, Australia. Blue: Mogo State Forest (rats), yellow: Kioloa (flagging), red: identified voucher specimens. (For interpretation of the references to colour in this figure legend, the reader is referred to the Web version of this article.)
Fig. 1 in Cryptic species diversity in ticks that transmit disease in Australia
Fig. 1. Satellite maps of (a) Australia (b) Kioloa and (c) Mogo state forest sample collection sites with coordinates, latitude on the y axis and longitude on the x axis. (a) yellow: NSW general location of sites (b) orange: Kioloa ANU campus, yellow: Kioloa dunes (c) blue: Mogo State Forest (Kahle and Wickham, 2013). (For interpretation of the references to colour in this figure legend, the reader is referred to the Web version of this article.)
Fig. 5. Phylogenetic tree including Ornithodoros huajianensis n in Ornithodoros (Ornithodoros) huajianensis sp. nov. (Acari, argasidae), a new tick species from the Mongolian marmot (Marmota bobak sibirica), Gansu province in China
Fig. 5. Phylogenetic tree including Ornithodoros huajianensis n. sp. and other selected species of Ixodes based on 16S rDNA. The alignment was produced using Clustal X and the tree was inferred by means of the MP method with 500 replicates of random addition. The species Otobius megnini was used as outgroup. The Bayesian support (posterior probability) values are derived from 1,000,000 replicates.
Fig. 1. Ornithodoros huajianensis n in Ornithodoros (Ornithodoros) huajianensis sp. nov. (Acari, argasidae), a new tick species from the Mongolian marmot (Marmota bobak sibirica), Gansu province in China
Fig. 1. Ornithodoros huajianensis n. sp. (female, holotype): A) dorsal view, entire; B) ventral view, entire; C) basis capitulum; D) Coxa I ∼ IV.
Fig. 3. Ornithodoros huajianensis n in Ornithodoros (Ornithodoros) huajianensis sp. nov. (Acari, argasidae), a new tick species from the Mongolian marmot (Marmota bobak sibirica), Gansu province in China
Fig. 3. Ornithodoros huajianensis n. sp. (male, paratype): A) basis capitulum; B) ventral view, entire; C) Coxa I ∼ IV; D) tarsi II and IV; E) Spiracle plate; F) genital apron; G) comparative morphology of genital apron in O. moubata.
Fig. 1 in Molecular screening for rickettsial bacteria and piroplasms in ixodid ticks surveyed from white-tailed deer (Odocoileus virginianus) and nilgai antelope (Boselaphus tragocamelus) in southern Texas
Fig. 1. Prevalence of ixodid ticks on white-tailed deer and nilgai on the Laguna Atascosa Wildlife Refuge (LANWR) in Cameron County (Texas). The LANWR is divided into Units, outlined in yellow. Deer and nilgai were harvested from the indicated units during the public hunt season in 2018–2019. Deer are identified by circles, nilgai are identified by triangles. Ixodid tick species collected either singly or in combination from these hosts are indicated by a different fill color presented in the legend. Animals from which no ticks were collected are shaded in green ('Not infested'). Rmic: Rhipicephalus (Boophilus) microplus; Anit: Anocenter nitens; Amac: Amblyomma maculatum; Iscap: Ixodes scapularis. Inset: The LANWR units are shaded in yellow, while the East Foundation's El Sauz Ranch located north of the LANWR is shaded in maroon.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.