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Figure 1 in New eriophyoid mites (Acari: Prostigmata: Eriophyoidea) from cultivated plants from northeastern Brazil, including the second taxon in the Prothricinae
Figure 1. Neoprothrix hibiscus gen. nov., sp. nov. CGM, coxigenital region, male; D, dorsal habitus, female; em, empodium, leg I, female; IG, internal genital structures, female; L1, leg I, female; L2, leg II, female; V, ventral habitus, female.
Data from: Crop-to-wild gene flow and spatial genetic structure in the closest wild relatives of the cultivated apple
Crop-to-wild gene flow have important evolutionary and ecological consequences and require careful consideration in conservation programs for wild genetic resources of potential use in breeding programs and in assessments of the risk of transgene escape into natural ecosystems. Using 26 microsatellites and a set of 1181 trees, we investigated the extent of introgression from the cultivated apple, Malus domestica, to its three closest wild relatives, M. sylvestris in Europe, M. orientalis in the Caucasus and M. sieversii in Central Asia. We found footprints of introgression from M. domestica to M. orientalis (3.2% of hybrids), M. sieversii (14.8%) and M. sylvestris (36.7%). Malus sieversii and M. orientalis presented weak but significant genetic structures across their geographic range. Malus orientalis displayed genetic differentiation with three differentiated populations in Turkey, Armenia and Russia. Malus sieversii consisted of a main population spread over Central Asia and a smaller population in the Tian Shan Mountains. The low Sp values suggest high dispersal capacities for the wild apple relatives. High potential for crop-to-wild gene flow in apples needs to be considered in the implementation of in situ and ex situ actions for the conservation of wild apple genetic resources potentially useful to plant breeding.
Data from: Auxotrophy and intra-population complementary in the 'interactome' of a cultivated freshwater model community
Microorganisms are usually studied either in highly complex natural communities or in isolation as monoclonal model populations that we manage to grow in the laboratory. Here, we uncover the biology of some of the most common and yet-uncultured bacteria in freshwater environments using a mixed culture from Lake Grosse Fuchskuhle. From a single shotgun metagenome of a freshwater mixed culture of low complexity, we recovered four high-quality metagenome-assembled genomes (MAGs) for metabolic reconstruction. This analysis revealed the metabolic interconnectedness and niche partitioning of these naturally dominant bacteria. In particular, vitamin- and amino acid biosynthetic pathways were distributed unequally with a member of Crenarchaeota most likely being the sole producer of vitamin B12 in the mixed culture. Using coverage-based partitioning of the genes recovered from a single MAG intrapopulation metabolic complementarity was revealed pointing to 'social' interactions for the common good of populations dominating freshwater plankton. As such, our MAGs highlight the power of mixed cultures to extract naturally occurring 'interactomes' and to overcome our inability to isolate and grow the microbes dominating in nature.
Supplementary material 1 from: Těšitelová T, Knotková K, Knotek A, Cempírková H, Těšitel J (2024) Root hemiparasites suppress invasive alien clonal plants: evidence from a cultivation experiment. NeoBiota 90: 97-121. https://doi.org/10.3897/neobiota.90.113069
Supplementary information
Supplementary material 2 from: Těšitelová T, Knotková K, Knotek A, Cempírková H, Těšitel J (2024) Root hemiparasites suppress invasive alien clonal plants: evidence from a cultivation experiment. NeoBiota 90: 97-121. https://doi.org/10.3897/neobiota.90.113069
Primary data table
Fig. 2 in Extensive analysis of the cultivated medicinal herbal drug Origanum dictamnus L. and antimicrobial activity of its constituents
Fig. 2. Main HMBC and ROESY signals supporting the structure of compound 9.
Fig. 1 in Extensive analysis of the cultivated medicinal herbal drug Origanum dictamnus L. and antimicrobial activity of its constituents
Fig. 1. Structures of the isolated/detected compounds in Origanum dictamnus aerial parts.
Fig. 7. Predicted Boiled-Egg plot from Swiss ADME online web tool for compounds 1–3 in Characterization of undescribed melanoma inhibitors from Euphorbia mauritanica L. cultivated in Egypt targeting BRAF and MEK 1 kinases via in-silico study and ADME prediction
Fig. 7. Predicted Boiled-Egg plot from Swiss ADME online web tool for compounds 1–3.
Fig. 1 in Characterization of undescribed melanoma inhibitors from Euphorbia mauritanica L. cultivated in Egypt targeting BRAF and MEK 1 kinases via in-silico study and ADME prediction
Fig. 1. Chemical structures of isolated compounds (1–11).
Fig. 3 in Characterization of undescribed melanoma inhibitors from Euphorbia mauritanica L. cultivated in Egypt targeting BRAF and MEK 1 kinases via in-silico study and ADME prediction
Fig. 3. Significant NOESY correlations of diterpenoids 1–3.
Fig. 2. Significant 1H 1H in Characterization of undescribed melanoma inhibitors from Euphorbia mauritanica L. cultivated in Egypt targeting BRAF and MEK 1 kinases via in-silico study and ADME prediction
Fig. 2. Significant 1H 1H COSY and HMBC correlations of diterpenoids 1–3.
FOUNDATIONAL PRINCIPLES IN CULTIVATING TEACHERS' PROFESSIONAL COMPETENCE
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Fig. 1 in The discovery and naming of Papaver orientale s.l. (Papaveraceae) with notes on its nomenclature and early cultivation
Fig. 1. – Papaver pseudo-orientale (Fedde) Medw. Pen-and-ink drawing by C. Aubriet, 1701. [MS 78, fig. 198; © Muséum national d'Histoire naturelle, Bibliothèque centrale, Paris]
Lemna minor Cultivation for Treating Swine Manure and Providing Micronutrients for Animal Feed
<p>The potential of Lemna minor to valorise agricultural wastewater into a protein-rich feed component to meet the growing demand for animal feed protein and reduce the excess of nutrients in certain European regions was investigated. Three pilot-scale systems were monitored for nine weeks under outdoor conditions in Flanders. The systems were fed with a mixture of the liquid fraction and the biological effluent of a swine manure treatment system diluted with rainwater in order that the weekly N and P addition was equal to the N and P removal by the system. The design tested the accumulation of elements in a continuous recirculation system. Potassium, Cl, S, Ca, and Mg were abundantly available in the swine manure wastewaters and tended to accumulate, being a possible cause of concern for long-operating recirculation systems. The harvested duckweed was characterised for its mineral composition and protein content. In animal husbandry, trace elements are specifically added to animal feed as micronutrients and, thus, feedstuffs biofortified with essential trace elements can provide added value. Duckweed grown on the tested mixture of swine manure waste streams could be considered as a source of Mn, Zn, and Fe for swine feed, while it is not a source of Cu for swine feed. Moreover, it was observed that As, Cd, and Pb content were below the limits of the feed Directive 2002/32/EC in the duckweed grown on the tested medium. Overall, these results demonstrate that duckweed can effectively remove nutrients from agriculture wastewaters in a recirculated system while producing a feed source with a protein content of 35% DM.</p>
Supplementary material 1 from: Barboza GE, García CC, Bianchetti LB, Romero MV, Scaldaferro M (2022) Monograph of wild and cultivated chili peppers (Capsicum L., Solanaceae). PhytoKeys 200: 1-423. https://doi.org/10.3897/phytokeys.200.71667
Appendix 1. Anatomical characters of Capsicum fruits
Supplementary material 4 from: Barboza GE, García CC, Bianchetti LB, Romero MV, Scaldaferro M (2022) Monograph of wild and cultivated chili peppers (Capsicum L., Solanaceae). PhytoKeys 200: 1-423. https://doi.org/10.3897/phytokeys.200.71667
Appendix 4. Specimens examined
Supplementary material 2 from: Barboza GE, García CC, Bianchetti LB, Romero MV, Scaldaferro M (2022) Monograph of wild and cultivated chili peppers (Capsicum L., Solanaceae). PhytoKeys 200: 1-423. https://doi.org/10.3897/phytokeys.200.71667
Appendix 2. Seed characters and seed coat features in Capsicum
Effect of planting density on growth characteristics and grain yield increase in successive cultivations of two rice (Oryza sativa L.) cultivars
<p><span>Rice (<i>Oryza sativa</i> L.) re-cultivation plays an important role in increasing land productivity and efficiency in crop rotation. Planting density (PD) is an important agronomic factor to achieving maximum grain yield (GY). The current study aimed to determine the best PD for the first cultivation and re-cultivation of rice. The experiment was conducted as a split plot based on the randomized complete block design with three replications at Ghaemshahr University, Mazandaran (northern Iran) from 2013 to 2014. Treatments consisted of cultivar, i.e. Tarom Hashemi and Koohsar, at two levels as the main factor and PDs at the three levels of 16, 25, and 33.3 hills m<sup>-2</sup> with planting spaces of 25 × 25, 20 × 20, and 30 × 10 cm<sup>2</sup>, respectively, as the sub factor. The results of the current study showed that cultivar for the first cultivation, and year for the re-cultivation had a significant effect on GY. PD had a significant effect on GY in both first cultivation and re-cultivation. The GY of Hashemi in the first cultivation (36.1%) and re-cultivation (18.5%) was higher than that of Koohsar. GY in the first cultivation and re-cultivation had an increasing trend; PD increased up to 33.3 hills m<sup>-2</sup> as 19.9% and 21.4% in the first cultivation and re-cultivation, respectively, due to the increase in number of panicles m<sup>-2</sup> (30.1% and 30.6%, respectively). Hashemi is suitable for the first cultivation. It is noteworthy, also, that a density of 33.3 hills m<sup>-2</sup> is recommended for the first cultivation and re-cultivation.</span></p>
CS2 Kelp cultivation with MACR-E offshore technology - profitability analysis 2022
<p>Data set containing calculations and results of the analysis of the economic performance of the offshore kelp cultivation technology used in the Faroe Islands called MACR-E. The dataset includes optimizations scenarios and their economic outcome. Data on costs and productivity was classified as confidential for industrial property protection and will not uploaded in any public repository.</p>
Figures 2-9 from: Silva GL, Metzelthin MH, Da-Costa T, Rocha MS, Silva DE, Ferla NJ, Silva OS (2017) Responses of water mite assemblages (Acari) to environmental parameters at irrigated rice cultivation fields and native lakes. Zoologia 34: 1-8. https://doi.org/10.3897/zoologia.34.e19988
Figures 2-9 View of the study sites: (2) Detailed view of the rice-water samples, (3) Rice area 1 – R1, (4) Rice area 2 – R2, (5) Rice area 3 – R3, (6) Rice area 4 – R4, (7) Lake 1 – L1, (8) Lake 2 – L2, (9) Lake 3 – L3.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.