Find research datasets worth reusing

opencc-by-4.0Dec 2021View details →

Replication package for "Long Run Effects of Aid: Forecasts and Evidence from Sierra Leone"

Replication package for "Long Run Effects of Aid: Forecasts and Evidence from Sierra Leone" by K.Casey, R. Glennerster, E. Miguel and M. Voors, in the Economic Journal 2022

opencc-by-4.0Jan 2023View details →

Players of the Innovation Ecosystem: A Quantitative Analysis of the Scientific Collaboration of a State-Run Research Institute in Brazil

Análise de colaborações em artigos do Instituto Nacional de Tecnologia.

opencc-by-4.0Feb 2023View details →

V6-V10 - Raw Data - Motion-resolved fat fraction mapping with whole-heart free-running multiecho GRE

(PART 2) whole-heart cardiac MRI datasets from healthy volunteers (1.5T) Each folder labelled V6-V10 contains: 1) Free-running multiecho GRE (NTE=8) raw data file 2) ECG-triggered multiecho GRE (NTE=5) raw data file 3) Matlab file "PhysioInfo.mat" containing the physiological signal information (Pilot Tone raw data, extracted respiratory signal, extracted cardiac signal, extracted cardiac trigger points, and corresponding time stamps). ************************************************************************************************************************************************************************************************************************************************************ Matlab code to load the raw data, compute the 3D trajectory and read the raw and extracted Pilot Tone signals is available at: <a href="https://github.com/QIS-MRI/ReadDataAndTrajectory_FreeRunningFatFractionHeart">https://github.com/QIS-MRI/ReadDataAndTrajectory_FreeRunningFatFractionHeart</a> ************************************************************************************************************************************************************************************************************************************************************ Please cite the following work when using this dataset: Link to publication: <a href="https://onlinelibrary.wiley.com/doi/10.1002/mrm.29680">https://onlinelibrary.wiley.com/doi/10.1002/mrm.29680</a> ************************************************************************************************************************************************************************************************************************************************************ Data was collected and approved for sharing according to the terms of the Ethics authorization CER-VD 2021-00708 (Lausanne, Switzerland).

opencc-by-4.0Mar 2023View details →

Data to run analyses present in the paper: Cell specificity of human regulatory annotations and their genetic effects on gene expression

Data for the manuscript: Varshney A., H. VanRenterghem, P. Orchard, A. P. Boyle, M. L. Stitzel, et al., 2019 Cell Specificity of Human Regulatory Annotations and Their Genetic Effects on Gene Expression. Genetics 211: 549–562. <a href="https://doi.org/10.1534/genetics.118.301525">https://doi.org/10.1534/genetics.118.301525</a> The code to generate these data are at GitHub:  https://github.com/ParkerLab/regulatoryAnnotations_comparisons Also see processed data available in this previous Zenodo record: https://zenodo.org/record/1413623

BNCI_less_runs_and_channels

BNCI2014001 first four files with less runs and just the following channels: "Fz", "FC3", "FC1", "FCz", "FC2", "FC4", "C5"

opennotspecifiedApr 2023View details →

Figure 2 in Tyrannosaurus rex runs again: a theoretical analysis of the hypothesis that full-grown large theropods had a locomotory advantage to hunt in a shallow-water environment

Figure 2. Depiction of the measurements (a, b, h) taken from figures in the paper by Bates et al. (2009) and the methods to estimate wetted areas and volumes from cylindrical slices. A representative example of the methods (best reconstruction of Tyrannosaurus rex BHI 3033) is shown. The silhouettes were modified from fig. 5 in the paper by Bates et al. (2009). A, cranial view and lateromedial measurements. B, right lateral view and anteroposterior measurements. C, a generic cylindrical slice and the equations to estimate the contribution to the total areas and volumes.

opennotspecifiedApr 2023View details →

Figure 1 in Tyrannosaurus rex runs again: a theoretical analysis of the hypothesis that full-grown large theropods had a locomotory advantage to hunt in a shallow-water environment

Figure 1. Schematic representation of the hunting scenario. Tyrannosaurus rex is wading in mode II, while Edmontosaurus annectens and Struthiomimus sedens are already engaged in mode IV, corresponding to surface swimming.

opennotspecifiedApr 2023View details →

Figure 3. A in Tyrannosaurus rex runs again: a theoretical analysis of the hypothesis that full-grown large theropods had a locomotory advantage to hunt in a shallow-water environment

Figure 3. A comparative plot of maximum speed in water as a function of water depth for the three species studied here.

A comment on Dincecco et al. (2022): Pre-colonial warfare and long-run development in India

We test the reproducibility and replicability of Dincecco et al. (2022), which reports a positive relationship between pre-colonial interstate warfare and long-run development patterns across India. Overall, we confirm that all of the study’s estimates are computationally reproducible using the provided replication package in Stata, but note that the ease of replication could be improved by the provision of code and intermediate datasets for the conflict exposure measure. We test for and find no evidence of data manipulation in the final datasets. Concerning direct replicability, we consider different ways of measuring distance to conflicts and also alternative proxies for both the dependent variable and variables which capture channels by which the main effects operate. We find that some estimates are sensitive to the type of con- flict considered. Other estimates are sensitive to the time period considered, most likely due to time heterogeneity in the number of conflicts recorded. Nevertheless, most estimates are substantially in line with the original study

Downloaded datasets required to run code repository

Downloaded datasets required to run code repository

opencc-by-4.0Jun 2023View details →

OpenRTP: Dataset of long-running test suites

OpenRTP is a dataset of long-running test suites for software testing research. OpenRTP curates test suite runs of continuous integration (CI) builds from actively-maintained, open-source projects with rich commit history and publicly accessible CI servers.

opencc-by-4.0Jul 2023View details →

Reconstruction of car–running pedestrian accident based on humanoid robot method

This is the appendix of the manuscript titled "Reconstruction of car–running pedestrian accident based on humanoid robot method", which will help the reviewers to better understand the manuscript. It is also the supporting part of this manuscript.

opencc-by-4.0Dec 2022View details →

Dense vegetation hinders sediment transport towards saltmarsh interiors - Supporting data and source code (Part II: Main runs)

This is Part II of the supporting data and source code for the paper entitled "Dense vegetation hinders sediment transport towards saltmarsh interiors", submitted to Limnology and Oceanography Letters. It contains all input and output files for every simulations used in the paper. Each zip file corresponds to a model run.  TIGER_XX.zip: Scenario XX, hydro-morphodynamics and vegetation dynamics, years 0-100. TIGER_XX_100.zip: Scenario XX, hydro-morphodynamics and vegetation dynamics, years 100-200. TIGER_XX_HYYY.zip: Scenario XX, hydro-morphodynamics only, year YYY. Main scenarios: - 01: Spartina (Figures 1-5, S3-S10) - 02: Salicornia (Figures 1-5, S3-S10) - 83: No vegetation (Figures 1-5, S3, S8-S10) Additional scenarios: - 146: Spartina, low bulk drag coefficient (Figure S3) - 147: Spartina, very low bulk drag coefficient (Figure S3) - 148: Salicornia, low bulk drag coefficient (Figure S3) - 149: Salicornia, very low bulk drag coefficient (Figure S3) - 122: Spartina, low settling velocity (Figure S8) - 123: Spartina, high settling velocity (Figure S8) - 124: Salicornia, low settling velocity (Figure S8) - 125: Salicornia, high settling velocity (Figure S8) - 126: No vegetation, low settling velocity (Figure S8) - 127: No vegetation, high settling velocity (Figure S8) - 128: Spartina, low critical bed erosion shear stress (Figure S8) - 129: Spartina, high critical bed erosion shear stress (Figure S8) - 130: Salicornia, low critical bed erosion shear stress (Figure S8) - 131: Salicornia, high critical bed erosion shear stress (Figure S8) - 132: No vegetation, low critical bed erosion shear stress (Figure S8) - 133: No vegetation, high critical bed erosion shear stress (Figure S8) - 134: Spartina, low Partheniades constant (Figure S8) - 143: Spartina, high Partheniades constant (Figure S8) - 136: Salicornia, low Partheniades constant (Figure S8) - 144: Salicornia, high Partheniades constant (Figure S8) - 138: No vegetation, low Partheniades constant (Figure S8) - 145: No vegetation, high Partheniades constant (Figure S8) - 150: Spartina, low sediment dry bulk density (Figure S8) - 151: Spartina, high sediment dry bulk density (Figure S8) - 152: Salicornia, low sediment dry bulk density (Figure S8) - 153: Salicornia, high sediment dry bulk density (Figure S8) - 154: No vegetation, low sediment dry bulk density (Figure S8) - 155: No vegetation, high sediment dry bulk density (Figure S8) - 76: Spartina, replicate #1 (Figures S9-S10) - 77: Spartina, replicate #2 (Figures S9-S10) - 78: Spartina, replicate #3 (Figures S9-S10) - 88: Spartina, replicate #4 (Figures S9-S10) - 80: Salicornia, replicate #1 (Figures S9-S10) - 81: Salicornia, replicate #2 (Figures S9-S10) - 82: Salicornia, replicate #3 (Figures S9-S10) - 89: Salicornia, replicate #4 (Figures S9-S10) - 85: No vegetation, replicate #1 (Figures S9-S10) - 86: No vegetation, replicate #2 (Figures S9-S10) - 87: No vegetation, replicate #3 (Figures S9-S10) - 90: No vegetation, replicate #4 (Figures S9-S10)

Running a Data Center

This short presentation delivered as part of a consultation event for the Digital Footprints project examines the technical, organizational and legislative aspects and challenges of running a secure data center, based on a decade of working in secure data centers in both the UK and Germany.

The coenzyme A precursor pantethine restrains sarcoma growth through promotion of type 1 immunity - Run 1 cDNA 1

Dataset from article : The coenzyme A precursor pantethine restrains sarcoma growth through promotion of type 1 immunity 10X Single-cell RNA-sequencing dataset (1/5). RUN 1(/2), cDNA 1(/2). This repository contains results and necessary files for reproducing the analyses in Miallot et al. (2023). The instructions for reproducing the analysis are given in github (https://github.com/CIML-bioinformatic/PNlab_Sarcoma) and extra files are available in GEO/SRA (GSE221164).

The coenzyme A precursor pantethine restrains sarcoma growth through promotion of type 1 immunity - Run 2 cDNA 2

Dataset from article : The coenzyme A precursor pantethine restrains sarcoma growth through promotion of type 1 immunity 10X Single-cell RNA-sequencing dataset (4/5). RUN 2(/2), cDNA 2(/2). This repository contains results and necessary files for reproducing the analyses in Miallot et al. (2023). The instructions for reproducing the analysis are given in github (https://github.com/CIML-bioinformatic/PNlab_Sarcoma) and extra files are available in GEO/SRA (GSE221164).

The coenzyme A precursor pantethine restrains sarcoma growth through promotion of type 1 immunity - Run 2 cDNA 1

Dataset from article : The coenzyme A precursor pantethine restrains sarcoma growth through promotion of type 1 immunity 10X Single-cell RNA-sequencing dataset (3/5). RUN 2(/2), cDNA 1(/2). This repository contains results and necessary files for reproducing the analyses in Miallot et al. (2023). The instructions for reproducing the analysis are given in github (https://github.com/CIML-bioinformatic/PNlab_Sarcoma) and extra files are available in GEO/SRA (GSE221164).

The coenzyme A precursor pantethine restrains sarcoma growth through promotion of type 1 immunity - Run 1 cDNA 2

Dataset from article : The coenzyme A precursor pantethine restrains sarcoma growth through promotion of type 1 immunity 10X Single-cell RNA-sequencing dataset (2/5). RUN 1(/2), cDNA 2(/2). This repository contains results and necessary files for reproducing the analyses in Miallot et al. (2023). The instructions for reproducing the analysis are given in github (https://github.com/CIML-bioinformatic/PNlab_Sarcoma) and extra files are available in GEO/SRA (GSE221164).