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FIGURE 2 in Vampire Worms; A revision of Galapagomystides (Phyllodocidae, Annelida), with the description of three new species
FIGURE 2. Maximum Likelihood (ML) tree generated from the concatenation of mitochondrial (COI 16rRNA) and nuclear genes (18S rRNA, 28S rRNA). Numbers on nodes represent ML bootstrap values (above node) and Bayesian posterior probabilities (below node). Values below 50% for ML and 0.70 for posterior probabilities are not shown. '*' indicates G. aristata as the type species of Galapagomystides.
FIGURE 8 in Vampire Worms; A revision of Galapagomystides (Phyllodocidae, Annelida), with the description of three new species
FIGURE 8. Light microscopy (LM) images of Galapagomystides aristata from the East Pacific Rise. A—dorsal view of anterior, live (SAMA E8989). B—pygidium, live (SAMA E8989). C—lateral view of anterior, live (SAMA E8991). D—dorsal view of whole body, live (SAMA E8989). E—everted proboscis (SAMA E9002). F—compound chaetae (SAMA E8999). G—proboscis (SAMA E9002). H—parapodia (SAMA E8999). Abbreviations: a, antennae; dc, dorsal cirri; edc, elongated dorsal cirri; evc, elongated ventral cirri; vc, ventral cirri; p, palps; pro, prostomium; pyg, pygidium.
FIGURE 1 in Vampire Worms; A revision of Galapagomystides (Phyllodocidae, Annelida), with the description of three new species
FIGURE 1. Geographic distribution of Galapagomystides species, and collection localities (vents and seeps) for this study. Note G. aristata was not collected from its type locality Galapagos Rift hydrothermal vents.
FIGURE 6 in Vampire Worms; A revision of Galapagomystides (Phyllodocidae, Annelida), with the description of three new species
FIGURE 6. Most parsimonious reconstruction for habit of Galapagomystides. The ancestral state for the clade is ambiguous and could have been seep or vent. Galapagomystides verenae n. comb. is found at both vents and seeps and appears to have colonized seeps from a vent ancestral habitat.
FIGURE 7 in Vampire Worms; A revision of Galapagomystides (Phyllodocidae, Annelida), with the description of three new species
FIGURE 7. Most parsimonious reconstruction for Pacific habitat of Galapagomystides. The ancestral state for the clade is the eastern Pacific with Galapagomystides bobpearsoni n sp. and G. kathyae n. sp. independently colonizing the western Pacific.
FIGURE 4. Galapagomystides verenae n in Vampire Worms; A revision of Galapagomystides (Phyllodocidae, Annelida), with the description of three new species
FIGURE 4. Galapagomystides verenae n. comb. haplotype network, based on COI. Specimens collected from Costa Rica were sorted into three shades of blue based on varying depth. Oregon is the type locality.
FIGURE 5. Galapagomystides patricki n in Vampire Worms; A revision of Galapagomystides (Phyllodocidae, Annelida), with the description of three new species
FIGURE 5. Galapagomystides patricki n. sp. haplotype network, based on COI. All specimens were collected from Costa Rica at two depths. The haplotype of the holotype is indicated by *.
FIGURE 3 in Vampire Worms; A revision of Galapagomystides (Phyllodocidae, Annelida), with the description of three new species
FIGURE 3. Galapagomystides aristata haplotype network, based on COI. Specimens were collected from over 1,500 km along the East Pacific Rise.
Crack simulations in random heterogeneous media: worm burrows
<p>The folders correspond to the panels of Figure 5 in the referencing paper. The top row of figures are in the kic subfolder, cov_minus, baseline and cov_plus from left to right. The bottom two rows are in the kikic folder cov_minus, baseline and cov_plus from left to right.</p> <p> </p> <p>Data is in the .mat files, each of which contains three variables. x1_path contains the horizontal locations of the crack tip during its propagation and x2 path contains the vertical position.</p> <p> </p> <p>The data can be recreated by executing the .m files in each subfolder, having downloaded and extracted the entire archive. The files are matlab files which must be executed in matlab. </p> <p> </p> <p>The simulation engine is in burrow_prop_03.m</p>
Figure 8 in Discovery of a new scale worm (Annelida: Polynoidae) with presumed deep-sea affinities from an anchialine cave in the Balearic Islands (western Mediterranean)
Figure 8. Pollentia perezi gen. & sp. nov. (paratype MNCN 16.01/18956), parapodia. A, anterior parapodia, showing arrangement of elytrophores and cirrophores. B, dorsal view of parapodia of segments 13–15. C, detail of cirrophores, segment 14. D, micrograph of midbody parapodium, anterior view, showing neuroacicula by transparency. E, midbody parapodium, anterior view, scanning electron micrograph, showing chaetal bundles and tapering neuroacicular lobe. F, scanning electron micrograph of midbody parapodium with dorsal cirrus, posterior view. G, midbody parapodium ventral view, with elytrophore and a low, inconspicuous dorsal tubercle. H, detail of papilla on dorsal cirrus. I, anterior parapodia, ventral view. J, detail of papillae ventral cirrus segment 3. K, ventral cirri, smooth from segment 4. L, midbody ventral cirrus. M, ventral papilla. Abbreviations: al, acicular lobe; ci, cirrophore; dc, dorsal cirrus; el, elytrophore; nea, neuroacicular lobe; nei, interior neurochaetae; nes, superior neurochaetae; no, notochaetae; noa, notoacicular lobe; vc, ventral cirrus; 1–15,
Figure 9 in Discovery of a new scale worm (Annelida: Polynoidae) with presumed deep-sea affinities from an anchialine cave in the Balearic Islands (western Mediterranean)
Figure 9. Pollentia perezi gen. & sp. nov. (paratype MNCN 16.01/18956), chaetae. A, notochaetae tentacular segment (segment 1). B, notochaetae bundle. C, detail of tip of notochaetae. D, E, detail of superior neurochaetae, mid length. F, detail of distal end of superior neurochaetae. G, inferior neurochaetae. H, detail of distal end of inferior neurochaeta.
Figure 7 in Discovery of a new scale worm (Annelida: Polynoidae) with presumed deep-sea affinities from an anchialine cave in the Balearic Islands (western Mediterranean)
Figure 7. Pollentia perezi gen. & sp. nov. (paratype MNCN 16.01/18956), elytra. A, outer edge, with microtubercles. B, same, scanning electron micrograph. C, D, detail of microtubercles, scanning electron micrograph. E, light micrograph of tubercles on outer surface. F, smooth inner edge, scanning electron micrograph.
Figure 6 in Discovery of a new scale worm (Annelida: Polynoidae) with presumed deep-sea affinities from an anchialine cave in the Balearic Islands (western Mediterranean)
Figure 6. Pollentia perezi gen. & sp. nov. (paratype MNCN 16.01/18956). A, head with dissected appendages except for lateral antennae. B, head and anterior parapodia, side view (tentacular cirri with removed styles). C, lateral antenna. D, detail of lateral antenna, with internal papillae. E, detail of wrinkled palp, with longitudinal rows of papillae. F, papilla on palp. G, upper lip, without facial tubercle. H, second segment, with wide neuropodial acicular lobe. I, ventral cirrus of second segment. J, detail of papilla of first ventral cirrus. K, transverse rows of cilia on midbody dorsal sides. L, detail of dorsal rows of cilia. M, pharyngeal papillae. N, detail of jaw. Abbreviations: la, lateral antenna; ma, median antenna; mo, mouth; nea, neuroacicular lobe; noa, notoacicular lobe; pa, palp; ph, pharyx; tc, tentacular cirrus; ti, inferior tentacular cirrus; ts, superior tentacular cirrus; vc, ventral cirrus; 1–4, segment number; stars, rows of cilia.
Figure 4 in Discovery of a new scale worm (Annelida: Polynoidae) with presumed deep-sea affinities from an anchialine cave in the Balearic Islands (western Mediterranean)
Figure 4. Pollentia perezi gen. & sp. nov. live specimen. A, dorsal view, showing spotted pigmentation pattern, holotype MNCN 16.01/18955. B, ventral view, showing spotted pigmentation pattern, holotype MNCN 16.01/18955. C, dorsal view, paratype MNCN 16.01/18956. D, detail of anterior end; notice two elytra still attached on first two left elytrophores, paratype MNCN 16.01/18956. Images courtesy of WhiteLife Photography. Abbreviations: br, brain; cma, ceratophore median antenna; dc, dorsal cirrus; ely, elytra; ja, jaws; la, lateral antenna; li, lip; ma, median antenna; np, nephridial papillae; pa, palp; tc1, inferior tentacular cirrus; tcs, superior tentacular cirrus; stars, nephridial ducts.
Figure 5 in Discovery of a new scale worm (Annelida: Polynoidae) with presumed deep-sea affinities from an anchialine cave in the Balearic Islands (western Mediterranean)
Figure 5. Pollentia perezi gen. & sp. nov. (holotype MNCN 16.01/18955) specimen, with all elytra accidentally lost except for a posterior one. A, anterior segments, dorsal view, live specimen. B, detail of prostomium and head appendages, preserved specimen. C, anterior segments of live specimen, with proboscis partly everted. D, anterior segments, ventral view, preserved specimen. E, detail of anterior margin, showing mouth. F, anterior parapodia, ventral view, showing nephridial papillae. G, posterior segments, dorsal view. Abbreviations: cma, ceratophore median antenna; la, lateral antenna; li, lip; ma, median antenna; mo, mouth; np, nephridial papilla; pa, palp; ph, pharyx; tc, tentacular cirrus.
Figure 3 in Discovery of a new scale worm (Annelida: Polynoidae) with presumed deep-sea affinities from an anchialine cave in the Balearic Islands (western Mediterranean)
Figure 3. Phylogenetic hypothesis of Polynoidae inferred from a maximum likelihood analysis based on the reduced dataset of four concatenated genetic markers (18S rRNA, 28S rRNA, 16S rRNA and COI). Alignment was performed with MUSCLE for COI, using default parameters, and with MAFFT for 18S rRNA, 28S rRNA and 16S rRNA, using the xinsi option. Ambiguously aligned positions were removed with GBLOCKS. Support values in branches correspond, per order and separated by '/', to the bootstrap support (BS) values of the maximum likelihood IQ-TREE, the number of genes (concordance) and the numbers of positions (concordance). *Posterior probabilities> 0.9 recovered after Bayesian inference in MRBAYES.
Figure 1. A in Discovery of a new scale worm (Annelida: Polynoidae) with presumed deep-sea affinities from an anchialine cave in the Balearic Islands (western Mediterranean)
Figure 1. A, map of the Balearic Islands showing the known localities (red numbers) of the new cave polynoid worm Pollentia perezi gen. & sp. nov. (1), the stygobiont cirolanid isopod Metacirolana ponsi (1 and 2) and the stygobiont mysid Burrimysis palmeri (1, 2 and 3); these three taxa occur only in full-strength marine water layers of anchialine caves. B, plan view and section of the cave harbouring the new polynoid (after Suárez, 1993; modified). C, temperature and salinity profiles of the anchialine lake harbouring the new polynoid (notice euhaline conditions below 11 m depth). Temperature, salinity and depth profiles were obtained with an RBR XR-420 conductivity, temperature and depth (CTD) profiler.
Figure 6 in New records of sclerozoan fan worms in Acropora sp. from the Gulf of Mannar, south-eastern coast of India (Annelida: Sabellidae)
Figure 6. Notaulax pyrrhogaster (Grube, 1878). (a) Spine-like chaetae from collar; (b) superior thoracic chaetae, broadly hooded; (c) thoracic uncini; (d) paleate chaetae from thorax; (e) thoracic companion chaetae; (f) abdominal uncini; (g) paleate chaetae and needle-like chaetae from abdominal segments; (h) paleate chaetae from posterior segments; (i) posterior abdominal segments, ventral view.
Figure 3 in New records of sclerozoan fan worms in Acropora sp. from the Gulf of Mannar, south-eastern coast of India (Annelida: Sabellidae)
Figure 3. Acromegalomma quadrioculatum (Willey, 1905). (a) Collar and radiolar crown, ventral view; (b) dorsal collar margin and base of radiolar crown; (c) collar and radiolar crown, dorsal view; (d) collar and thoracic segments, ventral view; (e) collar, thoracic segments and anterior abdomen segments, ventral view; (f) radiolar eyes from dorsalmost pair.
Figure 2 in New records of sclerozoan fan worms in Acropora sp. from the Gulf of Mannar, south-eastern coast of India (Annelida: Sabellidae)
Figure 2. Blocks of dead Acropora sp. coral and its sclerozoan fan worms. (a, b) Radiolar crown of Acromegalomma quadrioculatum (Willey, 1905), circled in yellow; (c) bore in longitudinal section of Notaulax pyrrhogaster (Grube, 1878).
ScienceDex guides
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.