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Raw data to: "Persistent RNA virus infection is short-lived at the single cell level but leaves transcriptomic footprints"
<p>Raw data underlying the publication by Reuther and Martin et al. entitled "Persistent RNA virus infection is short-lived at the single cell level but leaves transcriptomic footprints"</p>
Living organisms and sedimentary remains from high mountain lakes in the Alps collected in Summer 2000
<p>A data set of environmental and biological data collected in 2000 during the ice-free period in high mountain lakes located above the local timberline in the Alps, in Italy, Switzerland and Austria. Environmental data include coordinates, geographical attributes and detailed information on vegetation, bedrock and land use in lake catchments. Chemical analyses of a sample for each lake collected at the lake surface in Summer 2000 are also reported. Biological data include phytoplankton, zooplankton, macroinvertebrates, benthic diatoms. Diatoms, cladoceran and chironomids remains and algal and bacterial pigments were also analysed in lake sediments.</p>
Figure 5 in Three new species of free-living marine nematodes from the Bohai Sea and Yellow Sea, China
Figure 5. Parodontophora wuleidaowanensis sp. nov. (a) Lateral view of male head-end; (b) lateral view of female head-end; (c) tail of male; (d) tail of female. Scale bar: 20 mm.
Figure 4 in Three new species of free-living marine nematodes from the Bohai Sea and Yellow Sea, China
Figure 4. Parodontophora deltensis sp. nov. (a) Lateral view of male buccal cavity (400×); (b) lateral view of male anterior end, showing amphids (400×); (c) lateral view of male tail, showing spicules and gubernacula with apophyses (200×).
Figure 3 in Three new species of free-living marine nematodes from the Bohai Sea and Yellow Sea, China
Figure 3. Parodontophora deltensis sp. nov. (a) Lateral view of male head-end; (b) lateral view of male tail; (c) lateral view of male copulatory apparatus; (d) lateral view of female head-end; (e) tail of female. Scale bar: 20 mm (a, c, d); 50 mm (b, e).
Figure 2 in Three new species of free-living marine nematodes from the Bohai Sea and Yellow Sea, China
Figure 2. Paranticoma tricerviseta sp. nov. (a) Lateral view of male anterior end, showing cervical setae (1000×); (b) lateral view of spicules (400×); (c) lateral view of male tail (200×); (d) lateral view of conical part of male tail, showing subventral setae (400×).
Figure 1 in Three new species of free-living marine nematodes from the Bohai Sea and Yellow Sea, China
Figure 1. Paranticoma tricerviseta sp. nov. (a) Lateral view of male head-end; (b) lateral view of female head-end; (c) lateral view of male copulatory apparatus and ventral-middle setae behind anus in the tail; (d) last part of the tail. Scale bar: 20 mm.
Figs 57–58. Living specimens. 57 in The genusBolbelasmus in the western and southern regions of the Mediterranean Basin (Coleoptera: Geotrupidae: Bolboceratinae)
Figs 57–58. Living specimens. 57 – Bolbelasmus nikolajevi Hillert, Arnone, Král & Massa sp. nov. (paratype, ♂, Tunisia, Cap Bon peninsula, 6 km W of El Hawariah); 58 – B. vaulogeri (Abeille de Perrin, 1898) (♂, Tunisia, Cap Bon peninsula, 2 km NW of Douela). Photos by Petr Šípek.
Fig. 2. Dugesia species from Malaysia and Thailand. a, Living D in Molecular phylogenetics and sequence analysis of two cave-dwelling Dugesia species from Southeast Asia (Platyhelminthes: Tricladida: Dugesiidae)
Fig. 2. Dugesia species from Malaysia and Thailand. a, Living D. batuensis in a shallow stream in the Dark Cave, Batu Caves, Malaysia; b, Living D. deharvengi in a freshwater pool inside Tham Nen Noi, Thailand.
Fig. 1. Pillaia indica, live individuals. A in Descriptive Osteology of the Family Chaudhuriidae (Teleostei, Synbranchiformes, Mastacembeloidei), with a Discussion of Its Relationships
Fig. 1. Pillaia indica, live individuals. A. Adult male, ca. 80 mm. B. Subadult male, ca. 65 mm. C. Closeup of head of same specimen. D. Closeup of adult male, ca. 85 mm. Note absence of rostral tentacle.
FIG. 14. Living Toromys and Pattonomys. A in A Review of the Pattonomys/Toromys Clade (Rodentia: Echimyidae), with Descriptions of a New Toromys Species and a New Genus
FIG. 14. Living Toromys and Pattonomys. A, Toromys grandis, lower Rio Purus, (fig. 1, locality 31). Note the elongate body, the longer black hair on the proximal tail, and the broad foot with narrow heel. There is a postauricular patch of pale skin. The anterior bright eyeshine spot seems to show an oval, vertical pupil, the other spot is a reflection of the flash (image by Vinicius Carvalho). B, Pattonomys semivillosus in a black mangrove tree (Avicennia germinans) in Parque Nacional Isla de Salamanca, Magdalena, Colombia. The white postauricular tufts above and behind the ear are striking (photograph by Fabrice Schmitt). C, Toromys rhipidurus, captured near Iquitos, Peru. The evident cream-colored postauricular patches are not visible on most museum skins. The camera-flash has accentuated the yellow midbody hues (image by Pamela Sánchez-Vendizú).
Figs. 31–35. Protodufourea eickworti. 31. Live postdefecating larva, lateral view. 32, 33 in Immatures of Rophitine Bees, with Notes on their Nesting Biology (Hymenoptera: Apoidea: Halictidae)
Figs. 31–35. Protodufourea eickworti. 31. Live postdefecating larva, lateral view. 32, 33. Head, frontal and lateral views, respectively. 34, 35. Right mandible dorsal and ventral views, respectively. Scale refers to fig. 31.
Figure 20 in Anatomy, shell morphology, and microstructure of the living fossil Pulvinites exempla (Hedley, 1914) (Mollusca: Bivalvia: Pulvinitidae)
Figure 20. Nervous system in Pulvinites exempla. A diagrammatic lateral view showing the position of major nerves and ganglia. Inset: abdominal sense organ, transverse histological section (5 µm, Alcian Blue/Periodic Acid/Schiff 's stain; AMS C.129659, 62.2 mm). Scale bar = 50 µm. aso, abdominal sense organ; CP, cerebropleural ganglia; cpc, cerebropedal connectives; cvc, cerebrovisceral connectives; dpn, dorsal pedal nerves; gn, gill axis nerve; P, pedal ganglia (joined); pamn, posterior adductor muscle nerve; prmn, posterior pedobyssal retractor nerves; sec, supra-oesophageal connective; V, right visceral ganglion (left cannot be observed in this view).
Figure 19 in Anatomy, shell morphology, and microstructure of the living fossil Pulvinites exempla (Hedley, 1914) (Mollusca: Bivalvia: Pulvinitidae)
Figure 19. Heart in Pulvinites exempla (AMS C.129659, 62.2 mm). Transverse histological section (5 µm, Alcian Blue/Periodic Acid/Schiff's stain) (scale bar = 300 µm). au, auricles; in, intestine; v, ventricle.
Figure 17 in Anatomy, shell morphology, and microstructure of the living fossil Pulvinites exempla (Hedley, 1914) (Mollusca: Bivalvia: Pulvinitidae)
Figure 17. Morphology of ctenidia in Pulvinites exempla (AMS C.129659, 62.2 mm). Transverse histological section (5 µm, Alcian Blue/Periodic Acid/Schiff 's stain) of a single inner demibranch. A, section at the ventralmost edge of the demibranch margins showing the absence of serial interfilamentar tissue fusion. B, section slightly proximal to that of (A) showing the limited extent of interfilamental serial fusion restricted to a transient, narrow, median bridge. C, section at mid-height of the demibranch. Scale bar = 50 µm. ac, apical cilia; iij, interlamellar junction; lc, lateral cilia; mc, mucocyte; mlfc, microlaterofrontal cilia; ogf, ordinary gill filament; tf, tissue fusion.
Figure 14 in Anatomy, shell morphology, and microstructure of the living fossil Pulvinites exempla (Hedley, 1914) (Mollusca: Bivalvia: Pulvinitidae)
Figure 14. Details of mantle edge morphology in Pulvinites exempla (scanning electron microscopy; AMS C.129659, 62.2 mm). A, cross-section of the mantle; the arrow shows OF-2 (pallial skirt) (scale bar = 200 µm). B, lateral view of the interior mantle margin showing the outer surfaces of IF-1, IF-2, and OF-1; the arrow indicates the sinuous groove separating the inner fold (scale bar = 200 µm). C, magnified large tentacle of the inner surface of IF-1 (scale bar = 25 µm). D, small laterally compressed tentacles of the outer surface of IF-2 (scale bar = 50 µm). E, ciliated inner surface of IF-1 (scale bar = 10 µm). F, smooth inner surface of OF-1 (scale bar = 10 µm); IF, inner mantle fold; OF, outer fold; p, periostracum; t, tentacle.
Figure 16 in Anatomy, shell morphology, and microstructure of the living fossil Pulvinites exempla (Hedley, 1914) (Mollusca: Bivalvia: Pulvinitidae)
Figure 16. Morphology of ctenidia in Pulvinites exempla (scanning electron microscopy; AMS C.129659, 62.2 mm). A, right lateral view of a mid-ventral part of ctenidia showing food grooves of the inner demibranchs (arrows) (scale bar = 250 µm). The left outer demibranch is not shown. B, magnified right lateral view of a gill lamella showing ciliation of the frontal surface and ciliated disks connecting neighbouring filaments (square) (scale bar = 50 µm). C, abfrontal surface of a lamella showing interfilamentar connections mediated by ciliated disks (scale bar = 150 µm). D, magnified squared area in (B) showing the Velcro-like cilial connection of ciliated disks projecting from spurs (scale bar = 10 µm). E, isolated ciliated disk projecting from a spur (scale bar = 10 µm).
Figure 13 in Anatomy, shell morphology, and microstructure of the living fossil Pulvinites exempla (Hedley, 1914) (Mollusca: Bivalvia: Pulvinitidae)
Figure 13. Mantle edge morphology in Pulvinites exempla (AMS C.129659, 62.2 mm). Histological cross-section (5 µm, Alcian Blue/Periodic Acid/Schiff's stain). A, overview of the mantle margin at the ventral edge of the mantle showing the proximal displacement of OF-2 (pallial skirt) (scale bar = 500 µm). B, magnified mantle margin (scale bar = 200 µm). C, close-up of OF-2; the arrows indicate pigmented (presumably secretory) cells (scale bar = 50 µm). D, cross-section of the mantle edge posterior to the mantle isthmus showing the distal position of OF-2 and merging IF-1 and OF-2 folds (scale bar = 100 µm). c, circumpallial artery; IF, inner mantle fold; OF, outer fold; p, periostracum; pgr, periostracal groove; t, tentacle.
Figure 15 in Anatomy, shell morphology, and microstructure of the living fossil Pulvinites exempla (Hedley, 1914) (Mollusca: Bivalvia: Pulvinitidae)
Figure 15. Posterior adductor muscle in Pulvinites exempla (AMS C.129659, 62.2 mm). Histological sagittal section (5 µm, Alcian Blue/Periodic Acid/Schiff's stain). The section was made close to the attachment surface of the adductor muscle showing slightly denser packed muscle fibres in the anterior section (right side) than in the posterior section (left side), separated by the dashed line (scale bar = 150 µm). Inset: visceral transverse connective (vc) suspended in loose connective tissue at the anteroventral surface of the posterior adductor muscle (pam) (scale bar = 250 µm).
Figure 10 in Anatomy, shell morphology, and microstructure of the living fossil Pulvinites exempla (Hedley, 1914) (Mollusca: Bivalvia: Pulvinitidae)
Figure 10. Ligament morphology in Pulvinites exempla. A, lateral view of the left valve hinge plate showing the orientation of the ligament relative to the umbo (arrow) and the relative position of fibrous (F) and lamellar (L) sublayers. Superscripts indicate the ontogenetic order of the deposition of resilia (AMS C.129659; 62.2 mm). B, lateroventral view of the left valve hinge plate showing the breached ventral edge and the rounded cross-section of resilifers. Note the difference in colour between the ligostracal resilifer walls and the underlying ostracum (NMNZ M.153627; 68.1 mm).
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.