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Figure 2 from: Neumann M, Ehnert F (2024) Knowledge re-integration in real-world laboratories to transform cities and communities: report on workshop designs. Research Ideas and Outcomes 10: e124018. https://doi.org/10.3897/rio.10.e124018
Figure 2 Template of the online whiteboard for the handbook workshops (translated into English).
Figure 3 from: Neumann M, Ehnert F (2024) Knowledge re-integration in real-world laboratories to transform cities and communities: report on workshop designs. Research Ideas and Outcomes 10: e124018. https://doi.org/10.3897/rio.10.e124018
Figure 3 Flashlight at the end of the DF transfer workshop; photo: Torsten Görg.
Figure 4 from: Neumann M, Ehnert F (2024) Knowledge re-integration in real-world laboratories to transform cities and communities: report on workshop designs. Research Ideas and Outcomes 10: e124018. https://doi.org/10.3897/rio.10.e124018
Figure 4 On-site excursion during the SLS transfer workshop; photo: Nicole Herzog.
Data from: Phenotypic antimicrobial resistance in Staphylococcus sp. and Enterococcus sp. isolated from surface water – a preliminary report
<p><span>Water as a vehicle of antimicrobial resistance (AMR) is a well-known phenomenon. Therefore, One Health inspired surveillance campaign to detect circulation of antimicrobial resistance through the ecosystem are very often based on investigation of water samples. Bacteria belonging to the genera <em>Staphylococcus</em> and <em>Enterococcus</em> are good models in One Health research because of their ubiquitous occurrence and effortless isolation techniques. In this study, we aimed to compare different types of water sources as potential spreaders of AMR staphylococci and enterococci in the ecosystem. For this reason, we took water samples from the Drava River and small waterholes in a forest area. We hypothesised that rivers could collect diverse bacteria and resistance from the catchment area, while forest waterholes gather bacterial contamination from the local wildlife, thus a less diverse resistant bacterial community characterise them. From 22 and 10 water samples, collected from waterholes and the Drava River active floodplain, we isolated 21 and 13 bacterial strains, respectively. The bacterial community of the river proved more diverse, while waterhole samples contained resistant bacteria to more antimicrobials. In waterhole samples, we detected two methicillin resistant coagulase negative Staphylococcus strains. The most conspicuous difference between the two habitats was the predominance of multidrug resistant <em>S. sciuri</em> in the forest waterholes. We could conclude that water could be a good indicator of AMR contamination of the ecosystem, and large-scale sampling could reveal the exact epidemiological role of different water habitats.</span></p>
Fig. 39 in A Report on Coralliidae (Cnidaria: Octocorallia) Specimens Collected from the Emperor Seamounts with Descriptions of Three New Species
Fig. 39. Hemicorallium cf. sulcatum, NSMT-Co 1734. Composition of sclerites from each part sampled.
Fig. 16 in A Report on Coralliidae (Cnidaria: Octocorallia) Specimens Collected from the Emperor Seamounts with Descriptions of Three New Species
Fig. 16. Hemicorallium cf. abyssale, NSMT-Co 1728. Composition of sclerites from each part sampled.
Figure 33 in Diversity, distribution and community composition of fish in perialpine lakes – "Projet Lac" synthesis report
Figure 33: Abramis brama (above) and Blicca bjoerkna (below) from Lake Biel.
JAMES technical report, scripts and data for "'Comparison of C3 photosynthetic responses to light and CO2 predicted by the leaf photosynthesis models of Farquhar et al. (1980) and Goudriaan et al. (1985)"
<p>Dear reader,</p> <p>In this repository you will find 7 MATLAB scripts and 3 Excel datasets. The script "A_curves_Figure2.m" calls the function scripts "FvCB_model_Figure2.m", "FvCB_model_Figure2_noTPU" and "G85_model_Figure2" to create Figure 2 of the JAMES publication. The script "G85_Rd_FigureS1" calls the function script "G85_model_FigureS1" to create Figure S1 of the Supporting Information. The script "r2_RMSE_Table2" calculates statistics displayed in Table 2 of the JAMES publication. The Excel worksheet "Table2.xlsx" contains the values in Table 2 of the JAMES publication for quick data copying. The Excel worksheets "FvCBparameters_fitted_withTPU.xlsx" and "FvCBparameters_fitted_noTPU.xlsx" contains fitted FvCB model parameter values that were obtained using the "fitaci" function from the plantecophys R package (Duursma, 2015). <br> <br> Kind regards,</p> <p>Kevin van Diepen </p>
Supplementary materials (s.m.) of "The first report on detecting SARS-CoV-2 inside bacteria of the human gut microbiome: A case series on asymptomatic family members and a child with COVID-19".
<p> These are Supplementary materials of the version 2 of the article published at the following link: https://f1000research.com/articles/11-135/v2. The article is: Brogna C, Cristoni S, Petrillo M <em>et al.</em> The first report on detecting SARS-CoV-2 inside bacteria of the human gut microbiome: A case series on asymptomatic family members and a child with COVID-19 [version 2; peer review]. <em>F1000Research</em> 2022, <strong>11</strong>:135 (<a href="https://doi.org/10.12688/f1000research.77421.2">https://doi.org/10.12688/f1000research.77421.2</a>) </p>
Figure 1 from: Weber D (2017) Biospeleological activities in Central Europe – a status report. Subterranean Biology 22: 59-65. https://doi.org/10.3897/subtbiol.22.13297
Figure 1 - Homepage of the cave animal of the year.
Figure 2 from: Weber D (2017) Biospeleological activities in Central Europe – a status report. Subterranean Biology 22: 59-65. https://doi.org/10.3897/subtbiol.22.13297
Figure 2 - Determination of cave animals in the "lab" during the JuHöFoLa (Photo: Otto Schwabe).
Figure 2 from: Runnel V, Wetzel F, Groom Q, Koch W, Pe'er I, Valland N, Panteri E, Kõljalg U (2016) Summary report and strategy recommendations for EU citizen science gateway for biodiversity data. Research Ideas and Outcomes 2: e11563. https://doi.org/10.3897/rio.2.e11563
Figure 2 - Break-out group discussion at the 2nd Stakeholder Roundtable (Credit: Florian Wetzel)
Figure 5 from: Runnel V, Wetzel F, Groom Q, Koch W, Pe'er I, Valland N, Panteri E, Kõljalg U (2016) Summary report and strategy recommendations for EU citizen science gateway for biodiversity data. Research Ideas and Outcomes 2: e11563. https://doi.org/10.3897/rio.2.e11563
Figure 5 - Biodiversity observation - from observation to data usage
Figure 1 from: Runnel V, Wetzel F, Groom Q, Koch W, Pe'er I, Valland N, Panteri E, Kõljalg U (2016) Summary report and strategy recommendations for EU citizen science gateway for biodiversity data. Research Ideas and Outcomes 2: e11563. https://doi.org/10.3897/rio.2.e11563
Figure 1 - Totally recorded occurrences in 80 European CS data portals and publicly shared in GBIF.
Figure 1 in First report of northern root-knot nematode, Meloidogyne hapla (Chitwood, 1949) on strawberry in Turkey
Figure 1: Damage of Meloidogyne hapla on strawberry roots.
FIGURE 3 in An analysis of fossil identification guides to improve data reporting in citizen science programs
FIGURE 3. The setup used to photograph bromalites for the identification guides.
FIGURE 2 in An analysis of fossil identification guides to improve data reporting in citizen science programs
FIGURE 2. Stratigraphic column of FMMS.
Figure 1 in First report of Chrysodeixis includens (Walker, [1858]) (Lepidotera: Noctuidae) in the dragon fruit (Hylocereus undatus) (Cactaceae)
Figure 1. (A and B) Caterpillars on H. undatus; and adults of C. includens (C and D).
Fig. 4 in Cases of albinism and leucism in amphibians in Italy: new reports
Fig. 4 - Leucistic larvae of Triturus carnifex (A) and Bufo viridis (B).
Fig. 6 in New report of Brevipalpus yothersi (Prostigmata: Tenuipalpidae) on blueberry in Florida
Fig. 6. Distal part of tarsus II of Brevipalpus yothersi female.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.