Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
6,234
datasets available to search
ShareScore release 0.9.0
Dataset results
6,234 results for “phenotypes”
Fusion oncoproteins and cooperating mutations define disease phenotypes in NUP98-rearranged leukemia [RNA-seq]
GEO Series GSE287297. Homo sapiens. 70 samples. Type: Expression profiling by high throughput sequencing.
Sepsis leads to lasting changes in phenotype and function of memory CD8 T cells (ATAC-Seq)
GEO Series GSE174357. Mus musculus. 5 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
The Yeast Atlas of Appalachia: Species and phenotypic diversity of herbicide resistance in wild yeast
<p>Supplemental Tables</p>
Fig. 1 in Biological Characteristics and Environmental Adaptation of Four Phenotypes ofPropylea japonica(Thunberg) (Coleoptera: Coccinellidae)
Fig. 1. Four phenotypes of Propylea japonica. a) ancora: bar at basal 1/3 of elytra separated from subhumeral spots; bar at apical 1/3 of elytra fused with subapical spots; b) tessellata: bar at basal 1/3 of elytra fused with subhumeral and subapical spots; bar at apical 1/3 of elytra fused with subapical spots; c) dionea: subhumeral spots triangular or round; subapical spots elongate or round. d) feliciae: subhumeral spots present, but subapical spots absent.
Phenotype-specific gene expression signature in unmutated sALS patients' peripheral blood
<p>The database includes the raw data of the article "Phenotype-specific gene expression signature in unmutated sALS patients' peripheral blood". Aim of this work was to define the transcriptomic signature of distinct ALS phenotypes, and to use this information for biomarkers development. We characterized n=48 sALS patients by clinical and paraclinical parameteres, and subdivided them in "Classic" (n=12), "Bulbar" (n=10), "Flail Arm" (n=7), "Flail Leg" (n=10) and "Pyramidal" (n=9) phenotypes. RNAs extracted from PBMCs isolated from patients and n=19 controls were sequenced. Our analysis allowed the visualization of gene expression clusters between patients and controls, except for "Flail Arm" group. Only one gene (Y-RNA, a misc_RNA component of the Ro60 ribonucleoprotein involved in cellular response to interferon-alpha) was upregulated at different levels across all phenotypes, whereas the other genes appeared to be more phenotype-specific. Taken together, our results indicate both the specificity of gene expression for each phenotype, and the presence of a shared altered transcript able to distinguish the analyzed phenotypes. Future goal is to determine a 'Y-RNA signature' in plasma and a multi-parametric prognostic score that could represent a simple and fast element for early diagnosis and discrimination among sALS phenotypes.</p>
The activation of Wnt signaling by a STAT6-dependent macrophage phenotype promotes mucosal repair in murine IBD
Open the record for dataset details and reuse information.
Radiological features of gait phenotypes in patients with idiopathic normal pressure hydrocephalus
<p>Introduction</p> <p>This database includes the raw data linked with the paper “ Radiological features of gait phenotypes in patients with idiopathic normal pressure hydrocephalus<span> </span>” in submission.</p> <p>In this paper, we reported radiological and clinical aspects of a patient’s cohort with possible or probable iNPH, divided in two different groups based on gait disorder phenotypes. We aimed to understand the neuroimaging correlates of iNPH phenotyping into different gait patterns, by assessing specific radiological features and their correlations with clinical scores.</p> <p>Methods</p> <p>We enrolled 86 probable iNPH patients (53 males; age range: 69–88 years), who underwent a comprehensive clinical assessment, including neuropsychological tests, and a conventional MRI scan. Cohort was subdivided into disequilibrium subtype (29 subjects) and locomotor subtype of HLGD (57 patients) based on gait evaluation. We compared the iNPH subtypes assessing differences in eight linear radiological indexes and their clinical correlates.</p> <p>Results</p> <p>The Height of the Third Ventricle was the only radiological feature that differed between the two motor phenotypes (p < 0.05), being higher in the locomotor subtype and showing a trend of correlation with the motor score of the Movement Disorder Society-Unified Parkinson’s Disease Rating Scale and with the continence score of the iNPH Rating Scale. Among several clinical-radiological correlations, a reduced callosal angle correlated with the severity of motor and urinary symptoms (p < 0.05).</p>
Chemistry Dashboard Data: High Throughput Phenotypic Profiling (HTPP)
Open the record for dataset details and reuse information.
FIGURE 4 in True branching and phenotypic plasticity in the planktonic cyanobacterium Dolichospermum brachiatum sp. nov. (Nostocales, Aphanizomenonaceae), from south-eastern Australia
FIGURE 4. Morphology of Dolichospermum brachiatum strain WB 20619 C1 grown in BG-11 0. Scale bars = 20 μm.
FIGURE 3 in True branching and phenotypic plasticity in the planktonic cyanobacterium Dolichospermum brachiatum sp. nov. (Nostocales, Aphanizomenonaceae), from south-eastern Australia
FIGURE 3. Cell dimensions of Dolichospermum brachiatum strain WB 20619 C1 under various growth and media conditions.
Figure 7 in Molecular and phenotypic data reveal a new Amazonian species of pit vipers (Serpentes: Viperidae: Bothrops)
Figure 7. Left Hemipenis from the holotype of Bothrops oligobalius sp. nov. (MZUSP 23282, field number MTR 13844). A: Sulcade face; B: Asulcade face. Scale bar = 1 mm.
Figure 1 in Molecular and phenotypic data reveal a new Amazonian species of pit vipers (Serpentes: Viperidae: Bothrops)
Figure 1. Phylogenetic relationships within Bothrops highlighting the placement of B. oligobalius sp. nov. (blue) and B. brazili (red) in the jararacussu species group. Posterior probabilities are shown above nodes. Scale bar indicates substitutions per site. Photo: B. oligobalius sp. nov. from French Guiana, by Maël Dewynter.
Figure 5 in Molecular and phenotypic data reveal a new Amazonian species of pit vipers (Serpentes: Viperidae: Bothrops)
Figure 5. Paratype of Bothrops oligobalius sp. nov. (ICN10002) from Leticia, Amazonas, Colombia. A: Dorsal view; B: Ventral view. Scale bar = 1 cm.
Figure 12. Subtree D in Phylogenetics of modern shorebirds (Charadriiformes) based on phenotypic evidence: analysis and discussion
Figure 12. Subtree D. Majority rule consensus (MRC) tree for species of Eudromianinae and Charadriinae in the present study. See Figure 9 for definitions of the symbols used.
Figure 4 in Phylogenetics of modern shorebirds (Charadriiformes) based on phenotypic evidence: analysis and discussion
Figure 4. Prior phylogenetic analyses of Charadriiformes: A, Cracraft et al. (2004); B, Thomas et al. (2004b).
Figure 5 in Phylogenetics of modern shorebirds (Charadriiformes) based on phenotypic evidence: analysis and discussion
Figure 5. Prior phylogenetic analyses of Charadriiformes: A, Paton & Baker (2006); B, Livezey & Zusi (2007).
Figure 2 in Phylogenetics of modern shorebirds (Charadriiformes) based on phenotypic evidence: analysis and discussion
Figure 2. Prior phylogenetic analyses of Charadriiformes: A, Christian et al. (1992a); B, Björklund (1994); C, Chu (1995); D, Ericson et al. (2003).
FIGURE 5 in Integrating voice and phenotype in a revision of the brush cuckoo Cacomantis variolosus (Aves: Cuculidae) complex
FIGURE 5. Australian Brush Cuckoo from Tanimbar Island Cacomantis variolosus ssp. (Photo courtesy of J.A. Eaton).
Figure 68 in Comprehensive phenotypic phylogenetic analysis supports the monophyly of stromateiform fishes (Teleostei: Percomorphacea)
Figure 68. Reference tree obtained under implied-weights parsimony (k = 13.56554), with sensitivity analysis of alternative weighting schemes, highlighting the interrelationships of node 75. Squares representing each value of k are coloured according to their respective element-based scores. Numbers below sensitivity plots indicate the average element-based comparison score for the clade. Node numbers referenced in the text displayed above each clade.
Figure 61 in Comprehensive phenotypic phylogenetic analysis supports the monophyly of stromateiform fishes (Teleostei: Percomorphacea)
Figure 61. The muscular attachment of the pharyngeal-sac raker in Stromateiformes. Raker bases are visible after removal of the external most layer of the sphincter oesophagi. A, in the ariommatid Ariomma melana (MZUSP 123246), rakers are large, round and with partly overlapping bases, forming a scale-like pattern. B, in the tetragonurid Tetragonurus cuvieri (MZUSP 123241), rakers are small, round, poorly ossified and with non-overlapping bases. C, D, in both the nomeid Nomeus gronovii (MZUSP 67590; C) and the stromateid Stromateus brasiliensis (MZUSP 51279; D), the raker bases are large, well ossified and stellate. Scale bars: 0.5 mm.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.