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622
datasets available to search
ShareScore release 0.9.0
Dataset results
622 results for “Genomic integrity”
scHiCAR: a tri-modal single-cell genomics technology for integrated transcriptome, epigenome, and 3D genome analysis in complex tissues [mouse_brain_scHiCAR_1]
GEO Series GSE305439. Mus musculus. 4 samples. Type: Other.
RTEL1 modulates H3 occupancy in heterochromatic regions and acts synergistically with MET1/DDM1 to maintain genome integrity
GEO Series GSE86447. Arabidopsis thaliana. 20 samples. Type: Methylation profiling by high throughput sequencing; Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Integrated genome, transcriptome and translatome profiling of neuroblastoma cells
GEO Series GSE22785. Homo sapiens. 42 samples. Type: Expression profiling by array; Genome variation profiling by genome tiling array.
Dissecting genetic components associated with eye disease using integrative genomic analysis [ATAC-seq]
GEO Series GSE201677. Homo sapiens. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genome-wide profiling of HPV integration in cervical intraepithelial neoplasia identifies enrichment of genetic elements associated with carcinogenesis
GEO Series GSE189452. Homo sapiens. 15 samples. Type: Expression profiling by high throughput sequencing.
Epigenome-wide Analysis of Asthma from The Asthma BioRepository for Integrative Genomic Exploration (Asthma BRIDGE) Project
GEO Series GSE294810. Homo sapiens. 986 samples. Type: Methylation profiling by genome tiling array.
Predicting Relapse in Patients With Medulloblastoma by Integrating Evidence From Clinical and Genomic Feature
GEO Series GSE201583. Homo sapiens. 111 samples. Type: Expression profiling by array; Third-party reanalysis.
Integrated Analysis of Genome-Wide DNA Copy Number and Gene Expression with Patient Outcomes in Esophageal Adenocarcinoma [Copy Number]
GEO Series GSE72660. Homo sapiens. 276 samples. Type: Genome binding/occupancy profiling by SNP array.
Integrating multi-omics data with genome scale metabolic modeling for the analysis of Pseudomonas aeruginosa persister cells
GEO Series GSE185914. Pseudomonas aeruginosa. 45 samples. Type: Expression profiling by high throughput sequencing.
Integrative genomic analyses revealed colorectal cancer susceptibility genes in risk loci identified in genome-wide association studies
GEO Series GSE121553. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Signal integration in lymphocytes via convergent genomic actions of NFATs with IRF4 and IRF8
GEO Series GSE104921. Homo sapiens; Mus musculus. 25 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Integrative genomic and cellular analyses of blood and T cells from HIV-1 controllers reveal a low inflammatory profile associated with strong HIV-specific adaptive responses [CD4/CD8]
GEO Series GSE108292. Homo sapiens. 37 samples. Type: Expression profiling by array.
Integrating a genome-wide association study with a large-scale transcriptome analysis to predict genetic regions influencing the glycemic index and texture in rice
GEO Series GSE123616. Oryza sativa Indica Group. 21 samples. Type: Expression profiling by array.
Integrative Epigenomic and Genomic Profiling of HCC Patients to Identify Key Driver Signaling Pathways of HCC Progression and Poor Outcome
GEO Series GSE52423. Homo sapiens. 128 samples. Type: Methylation profiling by array.
Genome models integrating chromatin contacts and nuclear lamin-genome interactions reveal implications of laminopathy-causing lamin mutations on genome architecture
GEO Series GSE81671. Homo sapiens. 25 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Integrated multilayer omics reveals the genomic, proteomic and metabolic influences of the histidyl dipeptides on heart
GEO Series GSE192583. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Integration of genomic and clinical data to predict endometrioid endometrial cancer recurrence
GEO Series GSE216872. Homo sapiens. 61 samples. Type: Expression profiling by high throughput sequencing.
Low-dose exposure to PBDE disrupts genomic integrity and innate immunity in mammary tissue
GEO Series GSE199054. Mus musculus. 15 samples. Type: Expression profiling by high throughput sequencing.
Nuclear phosphatase PfNIF2 governs erythrocyte invasion and genome integrity through invasion-related proteins and SR1 dephosphorylation
GEO Series GSE301593. Plasmodium falciparum. 18 samples. Type: Expression profiling by high throughput sequencing.
PedcBioPortal for Integrated Childhood Cancer Genomics
The PedcBioPortal contains data from close to 400 cancer genomics studies. This dataset only includes cases under the age of 40 years old.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.